Phenylobacterium zucineum

Taxonomy
Taxonomy database identifier: 284016
Superkingdom Bacteria
Phylum Proteobacteria
Class Alphaproteobacteria
Order Caulobacterales
Family Caulobacteraceae
Genus Phenylobacterium
Species zucineum
Peptidase View peptidase sequences from Phenylobacterium zucineum
Count of known and putative peptidases: 124, non-peptidase homologues 37
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AA A32 A32.001 PerP peptidase (Caulobacter sp.) MER0241635 PHZ_c2342
AC A8 unassigned family A8 unassigned peptidases MER0140777 lspA PHZ_c3162
AD A24 unassigned subfamily A24A unassigned peptidases MER0426191 PHZ_c0664
AD A24 unassigned subfamily A24B unassigned peptidases MER0127067 PHZ_c0357
AD A24 unassigned subfamily A24B unassigned peptidases MER0426929 cpaA PHZ_c2996
CA C39 non-peptidase homologue family C39 non-peptidase homologues MER0713949 PHZ_c2488
CA C96 C96.001 McjB peptidase MER0745905 PHZ_c2176
CA C96 unassigned family C96 unassigned peptidases MER0203669 PHZ_c2399 PHZ_c2399
CD C13 unassigned family C13 unassigned peptidases MER0123861 PHZ_c0864
CL C82 unassigned subfamily C82A unassigned peptidases MER0461379 PHZ_c3141
CO C40 C40.001 dipeptidyl-peptidase VI (bacteria) MER0127062 PHZ_c0359
G- G5 unassigned family G5 unassigned peptidases MER0936115 PHZ_c2869
GC G4 non-peptidase homologue family G4 non-peptidase homologues MER0319905 PHZ_c2932
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0335146 pepN PHZ_c2680
MA M1 unassigned family M1 unassigned peptidases MER0122113 PHZ_c1067
MA M2 unassigned family M2 unassigned peptidases MER0127072 PHZ_c0316
MA M3 unassigned subfamily M3A unassigned peptidases MER0127093 dcp PHZ_c0120
MA M3 unassigned family M3 unassigned peptidases MER0140890 PHZ_c3108
MA M10 M10.035 S-layer-associated peptidase MER1208811
MA M10 M10.035 S-layer-associated peptidase MER0188074 PHZ_c3294
MA M10 unassigned subfamily M10B unassigned peptidases MER0467213 PHZ_c1915
MA M13 unassigned family M13 unassigned peptidases MER0121297 PHZ_c1161
MA M13 unassigned family M13 unassigned peptidases MER0159659 PHZ_c2792
MA M41 M41.001 FtsH peptidase MER0138448 ftsH PHZ_c3283
MA M41 unassigned family M41 unassigned peptidases MER0172974 ftsH PHZ_p0086
MA M41 unassigned family M41 unassigned peptidases MER0173014 ftsH3 PHZ_p0160
MA M48 unassigned subfamily M48B unassigned peptidases MER0127068 htpX PHZ_c0349
MA M48 unassigned subfamily M48C unassigned peptidases MER0127133 PHZ_c0036
MA M56 unassigned family M56 unassigned peptidases MER0124972 PHZ_c0721
MA M61 M61.001 glycyl aminopeptidase MER0191084 PHZ_c1570
MD M15 unassigned subfamily M15B unassigned peptidases MER0351282
MD M15 unassigned subfamily M15B unassigned peptidases MER0469744 PHZ_c3142
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0121322 PHZ_c1112
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0141766 PHZ_c3416
ME M16 unassigned subfamily M16B unassigned peptidases MER0121352 PHZ_c1112
ME M16 unassigned subfamily M16B unassigned peptidases MER0141765 PHZ_c3416
ME M16 unassigned subfamily M16B unassigned peptidases MER0126232 PHZ_c0550
MF M17 unassigned family M17 unassigned peptidases MER0127066 PHZ_c0358
MF M17 unassigned family M17 unassigned peptidases MER0139144 pepA2 PHZ_c1704
MF M17 unassigned family M17 unassigned peptidases MER0126608 pepA PHZ_c0524
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0122013 PHZ_c1070
MG M24 unassigned subfamily M24A unassigned peptidases MER0127049 map PHZ_c0393
MG M24 unassigned subfamily M24A unassigned peptidases MER0352257
MG M24 unassigned subfamily M24B unassigned peptidases MER0189944 PHZ_c2239
MG M24 unassigned subfamily M24B unassigned peptidases MER0189945 PHZ_c2307
MH M20 non-peptidase homologue subfamily M20A non-peptidase homologues MER0854889 argE
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0189389 PHZ_c2644
MH M20 unassigned subfamily M20A unassigned peptidases MER0127054 dapE PHZ_c0379
MH M20 unassigned subfamily M20A unassigned peptidases MER0854099 PHZ_c3137
MH M20 unassigned subfamily M20A unassigned peptidases MER1218563
MH M20 unassigned subfamily M20A unassigned peptidases MER1205690
MH M20 unassigned family M20D unassigned peptidases MER0143924 cpsA PHZ_c1833
MH M20 unassigned family M20 unassigned peptidases MER0123769 PHZ_c0939
MH M20 unassigned family M20 unassigned peptidases MER0473498 PHZ_c1886
MH M20 unassigned family M20 unassigned peptidases MER0142310 PHZ_c2066
MH M28 unassigned subfamily M28B unassigned peptidases MER0127035 PHZ_c0398
MH M28 unassigned subfamily M28E unassigned peptidases MER0122134 PHZ_c1047
MH M28 unassigned family M28 unassigned peptidases MER0123980 PHZ_c0850
MH M28 unassigned family M28 unassigned peptidases MER0144439 PHZ_c2574
MJ M19 non-peptidase homologue family M19 non-peptidase homologues MER0137998 PHZ_c2114
MJ M19 unassigned family M19 unassigned peptidases MER0127076 PHZ_c0288
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0126876 PHZ_c0450
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0125720 PHZ_c0572
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0121479 PHZ_c1089
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0874882 PHZ_c3063
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0868297 PHZ_c3360
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0864048 PHZ_c1858
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0867412 PHZ_c2001
MJ M38 unassigned family M38 unassigned peptidases MER0127050 PHZ_c0387
MJ M38 unassigned family M38 unassigned peptidases MER0126870 hutI PHZ_c0465
MJ M38 unassigned family M38 unassigned peptidases MER0125407 PHZ_c0622
MM M50 non-peptidase homologue subfamily M50B non-peptidase homologues MER0890510 PHZ_c1773
MO M23 M23.009 Mername-AA292 peptidase MER0123988 PHZ_c0848
MO M23 M23.951 DipM g.p. (Caulobacter sp.) MER0477764 PHZ_c1957
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0127084 PHZ_c0245
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0127058 PHZ_c0370
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0125035 PHZ_c0719
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0480097 PHZ_p0245
MO M23 unassigned subfamily M23B unassigned peptidases MER0173467 PHZ_c1837
MO M23 unassigned subfamily M23B unassigned peptidases MER0159907 PHZ_c3097
MO M23 unassigned family M23 unassigned peptidases MER0126838 PHZ_c0491
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0126382 PHZ_c0541
MU M103 M103.UNW family M103 non-peptidase homologues MER0126772 PHZ_c0519
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0327149
PA S1 non-peptidase homologue subfamily S1B non-peptidase homologues MER0963080 PHZ_c3486
PA S1 unassigned subfamily S1B unassigned peptidases MER0966051 PHZ_p0037
PA S1 unassigned subfamily S1B unassigned peptidases MER0217245 PHZ_c0208
PA S1 unassigned subfamily S1B unassigned peptidases MER0217231 PHZ_c2721
PA S1 unassigned subfamily S1C unassigned peptidases MER0126559 PHZ_c0526
PA S1 unassigned subfamily S1C unassigned peptidases MER0121927 PHZ_c1087
PA S1 unassigned subfamily S1C unassigned peptidases MER0121186 PHZ_c1261
PA S1 unassigned subfamily S1C unassigned peptidases MER0206082 htrA PHZ_p0093
PA S1 unassigned subfamily S1C unassigned peptidases MER0408530 PHZ_p0102
PA S1 unassigned subfamily S1C unassigned peptidases MER0206054 htrA PHZ_c2689
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0141829 PHZ_c1539
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0127089 gltB PHZ_c0164
PB C44 C44.976 AsnB protein MER0125591 PHZ_c0612
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0159840 glmS PHZ_c2963
PB T1 T01.006 HslV component of HslUV peptidase MER0127134 hslV PHZ_c0033
PB T2 unassigned family T2 unassigned peptidases MER0159718 PHZ_c2832
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0126911 ggt PHZ_c0446
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0126675 PHZ_c0523
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0435780 trpG PHZ_c1759
PC C26 non-peptidase homologue family C26 non-peptidase homologues MER0442717 carA PHZ_c2580
PC C26 unassigned family C26 unassigned peptidases MER0127122 hisH PHZ_c0041
PC C26 unassigned family C26 unassigned peptidases MER0447962 PHZ_p0026
PC C26 unassigned family C26 unassigned peptidases MER0448104 PHZ_p0064
PC C26 unassigned family C26 unassigned peptidases MER0448526 PHZ_c2875
PC C56 C56.001 PfpI peptidase MER0137106 PHZ_c2654
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0124406 PHZ_c0831
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0122164 purQ PHZ_c1013
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0124015 PHZ_c0832
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0175436 PHZ_c2614
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0164193 PHZ_c2615
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0159789 PHZ_c2897
PE P1 P01.101 pantetheinyl hydrolase ThnT precursor MER0126882 dmpA PHZ_c0447
PE T5 T05.001 ornithine acetyltransferase precursor MER0124779 argJ PHZ_c0762
SB S8 S08.068 SphB1 peptidase MER0121932 PHZ_c1084
SC S9 S09.009 dipeptidyl-peptidase 4 (bacteria-type 1) MER0142126 PHZ_c2627 PHZ_c2627
SC S9 S09.010 oligopeptidase B MER0122012 ptrB PHZ_c1071
SC S9 S09.010 oligopeptidase B MER0159422 PHZ_c2722
SC S9 S09.071 trilobed protease MER0141812 PHZ_c2506
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0127079 PHZ_c0272
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0210717 PHZ_c2866
SC S9 unassigned subfamily S9A unassigned peptidases MER0122698 PHZ_c0964 PHZ_c0964
SC S9 unassigned subfamily S9A unassigned peptidases MER1291571
SC S9 unassigned subfamily S9A unassigned peptidases MER0127092 PHZ_c0125
SC S9 unassigned subfamily S9A unassigned peptidases MER0192160 PHZ_c1331
SC S9 unassigned subfamily S9B unassigned peptidases MER0998738 PHZ_c2024
SC S9 unassigned subfamily S9B unassigned peptidases MER0124669 PHZ_c0772 PHZ_c0772
SC S9 unassigned subfamily S9B unassigned peptidases MER1295508
SC S9 unassigned subfamily S9D unassigned peptidases MER0968355 PHZ_c2174
SC S9 unassigned subfamily S9D unassigned peptidases MER0693206 PHZ_c2397
SC S9 unassigned family S9 unassigned peptidases MER0127041 lipN PHZ_c0395
SC S9 unassigned family S9 unassigned peptidases MER0125353 PHZ_c0670
SC S9 unassigned family S9 unassigned peptidases MER0123492 PHZ_c0957
SC S9 unassigned family S9 unassigned peptidases MER0123262 PHZ_c0958
SC S9 unassigned family S9 unassigned peptidases MER0122145 PHZ_c1044
SC S9 unassigned family S9 unassigned peptidases MER0121209 PHZ_c1220
SC S9 unassigned family S9 unassigned peptidases MER0136745 PHZ_c2763 PHZ_c2763
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1025435 PHZ_c1723
SC S15 unassigned family S15 unassigned peptidases MER0122407 PHZ_c1012
SC S33 S33.001 prolyl aminopeptidase MER0175382 PHZ_c2278
SC S33 S33.973 cytosolic epoxide hydrolase MER0121308 PHZ_c1120
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0124893 PHZ_c0752
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0210958 PHZ_c3096
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0209755 PHZ_c3105
SC S33 unassigned family S33 unassigned peptidases MER0127086 PHZ_c0241
SC S33 unassigned family S33 unassigned peptidases MER0127031 metX PHZ_c0439
SC S33 unassigned family S33 unassigned peptidases MER0123831 PHZ_c0893
SC S33 unassigned family S33 unassigned peptidases MER0123763 PHZ_c0955
SC S33 unassigned family S33 unassigned peptidases MER0122010 PHZ_c1076
SC S33 unassigned family S33 unassigned peptidases MER0121156 PHZ_c1271
SE S11 S11.A01 penP g.p. (Bacillus subtilis) MER0980580 PHZ_c3367
SE S11 unassigned family S11 unassigned peptidases MER0122561 PHZ_c0990
SE S11 unassigned family S11 unassigned peptidases MER0121096 dacA PHZ_c1296
SE S12 S12.950 esterase EstB MER0142752 PHZ_c2514
SE S12 S12.950 esterase EstB MER0137999 PHZ_c2571
SE S12 S12.950 esterase EstB MER0122541 PHZ_c1001
SE S12 S12.950 esterase EstB MER0192898 PHZ_c1746
SE S12 S12.950 esterase EstB MER0175242 PHZ_c1860
SE S12 S12.950 esterase EstB MER0192900 PHZ_c3301
SE S12 S12.A23 GYO_0385 g.p. (Bacillus subtilis) MER0125659 PHZ_c0607
SE S12 S12.A23 GYO_0385 g.p. (Bacillus subtilis) MER0125240 PHZ_c0674
SE S12 non-peptidase homologue family S12 non-peptidase homologues MER0138074 PHZ_c1525
SE S12 unassigned family S12 unassigned peptidases MER0127101 estA PHZ_c0096
SE S12 unassigned family S12 unassigned peptidases MER0125857 PHZ_c0571
SE S12 unassigned family S12 unassigned peptidases MER0123923 PHZ_c0863
SE S12 unassigned family S12 unassigned peptidases MER0124881 PHZ_c0755
SE S12 unassigned family S12 unassigned peptidases MER0137014 PHZ_c2009
SE S12 unassigned family S12 unassigned peptidases MER0192899 PHZ_c2015
SF S24 S24.001 repressor LexA MER0175103 lexA PHZ_c1762
SF S26 S26.001 signal peptidase I MER0136744 PHZ_c1871
SF S26 S26.014 TraF peptidase MER0270215 traF PHZ_c1506
SF S26 unassigned subfamily S26A unassigned peptidases MER1336427 lepB
SJ S16 S16.001 Lon-A peptidase MER0137615 lon PHZ_c1812
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0474451 radA PHZ_c1541
SJ S16 unassigned family S16 unassigned peptidases MER1327249
SJ S16 unassigned family S16 unassigned peptidases MER0141813 lon PHZ_p0033
SJ S16 unassigned family S16 unassigned peptidases MER0141568 lon PHZ_p0070
SK S14 S14.001 peptidase Clp (type 1) MER0144573 clpP PHZ_c1817
SK S14 S14.001 peptidase Clp (type 1) MER0160033 clpP2 PHZ_c3138
SK S41 S41.004 C-terminal processing peptidase-3 MER0127085 PHZ_c0244
SK S41 non-peptidase homologue subfamily S41B non-peptidase homologues MER0123998 PHZ_c0837
SK S49 unassigned subfamily S49A unassigned peptidases MER1351659 sppA
SK S49 unassigned subfamily S49B unassigned peptidases MER0142489 sppA PHZ_c2729
SS S66 S66.001 murein tetrapeptidase LD-carboxypeptidase (Pseudomonas-type) MER0138000 PHZ_c2728
ST S54 unassigned family S54 unassigned peptidases MER0121315 PHZ_c1113
U- U32 U32.A01 YhbV protein (Escherichia coli) MER0125217 PHZ_c0679
U- U32 unassigned family U32 unassigned peptidases MER0125054 PHZ_c0680

GENOME ANALYSIS: Comparison with 18 completely sequenced genomes from family Caulobacteraceae
Family Comment
C44 lineage specific expansion (4 homologues)
M23 lineage specific expansion (9 homologues)
M24 lineage specific expansion (5 homologues)
S1 lineage specific expansion (10 homologues)
S16 lineage specific expansion (5 homologues)
T2 significant decrease in homologues (1 homologues)