Thermomicrobium roseum

Taxonomy
Taxonomy database identifier: 500
Superkingdom Bacteria
Phylum Chloroflexi
Class Thermomicrobia
Order Thermomicrobiales
Family Thermomicrobiaceae
Genus Thermomicrobium
Species roseum
Peptidase View peptidase sequences from Thermomicrobium roseum
Count of known and putative peptidases: 103, non-peptidase homologues 45
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0097272 lspA trd_1033
AD A24 unassigned subfamily A24A unassigned peptidases MER0121592
AE A31 unassigned family A31 unassigned peptidases MER0097132 trd_1873
CA C39 unassigned family C39 unassigned peptidases MER0106336 trd_0480
CL C60 unassigned subfamily C60A unassigned peptidases MER0121590 trd_A0751
CL C60 unassigned subfamily C60A unassigned peptidases MER0121548 trd_A0223
CL C60 unassigned subfamily C60A unassigned peptidases MER0121591 trd_A0782
CL C60 unassigned family C60 unassigned peptidases MER0121582 trd_A0640
CL C82 unassigned subfamily C82A unassigned peptidases MER0154890 trd_1371
CL C82 unassigned subfamily C82A unassigned peptidases MER0097130 trd_1960
CO C40 unassigned family C40 unassigned peptidases MER0106810 trd_0184
G- G5 unassigned family G5 unassigned peptidases MER0154897 trd_1052
MA M3 unassigned subfamily M3B unassigned peptidases MER0121540 pepF trd_A0908
MA M41 M41.009 FtsH-2 peptidase MER0106652 ftsH1 trd_0293
MA M41 unassigned family M41 unassigned peptidases MER0121572 ftsH2 trd_A0442
MA M41 unassigned family M41 unassigned peptidases MER0121594 ftsH trd_A0888
MA M48 unassigned subfamily M48B unassigned peptidases MER0106006 htpX trd_0760
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0121576 trd_A0561
ME M16 unassigned subfamily M16B unassigned peptidases MER0097208 trd_1505
ME M16 unassigned subfamily M16B unassigned peptidases MER0121575 trd_A0561
MF M17 unassigned family M17 unassigned peptidases MER0106174 pepA trd_0513
MG M24 unassigned subfamily M24A unassigned peptidases MER0121571 map trd_A0436
MG M24 unassigned subfamily M24A unassigned peptidases MER0105035 map trd_0963
MG M24 unassigned subfamily M24B unassigned peptidases MER0097160 trd_1697
MG M24 unassigned subfamily M24B unassigned peptidases MER0121578 trd_A0573
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0105051 trd_0879
MH M20 unassigned subfamily M20A unassigned peptidases MER0154872 trd_1520
MH M20 unassigned subfamily M20A unassigned peptidases MER0097227 trd_1459
MH M20 unassigned subfamily M20A unassigned peptidases MER0097265 trd_1071
MH M20 unassigned family M20D unassigned peptidases MER0121584 trd_A0657
MH M20 unassigned subfamily M20F unassigned peptidases MER0121546 trd_A0121
MH M20 unassigned family M20 unassigned peptidases MER0106653 trd_0281
MH M20 unassigned family M20 unassigned peptidases MER0106651 trd_0334
MH M20 unassigned family M20 unassigned peptidases MER0097271 trd_1045
MH M28 non-peptidase homologue subfamily M28B non-peptidase homologues MER0097184 trd_1563
MH M28 unassigned subfamily M28F unassigned peptidases MER0107146 trd_0073
MH M42 unassigned family M42 unassigned peptidases MER0106711 trd_0269
MH M42 unassigned family M42 unassigned peptidases MER0097270 trd_1063
MH M42 unassigned family M42 unassigned peptidases MER0097137 trd_1851
MH M42 unassigned family M42 unassigned peptidases MER0121593 trd_A0877
MJ M19 non-peptidase homologue family M19 non-peptidase homologues MER0097145 trd_1717
MJ M19 unassigned family M19 unassigned peptidases MER0097266 trd_1068
MJ M38 M38.982 urease MER0106123 ureC trd_0531
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0154891 trd_1943
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0154893 trd_1845
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0106764 trd_0214
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0121586 nagA trd_A0707
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0121567 trd_A0335
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0121569 trd_A0407
MM M50 unassigned subfamily M50B unassigned peptidases MER0097242 trd_1263
MM M50 unassigned subfamily M50B unassigned peptidases MER0154905 trd_1631
MM M50 unassigned subfamily M50B unassigned peptidases MER0097142 trd_1718
MM M50 unassigned family M50 unassigned peptidases MER0154889 trd_1057 trd_1057
MN M55 non-peptidase homologue family M55 non-peptidase homologues MER0899313 trd_A0904
MO M23 unassigned subfamily M23B unassigned peptidases MER0154868 trd_0480
MO M23 unassigned subfamily M23B unassigned peptidases MER0105052 trd_0846
MO M23 unassigned subfamily M23B unassigned peptidases MER0097131 trd_1939
MO M23 unassigned subfamily M23B unassigned peptidases MER0121588 trd_A0728
MO M23 unassigned subfamily M23B unassigned peptidases MER0121583 trd_A0646
MP M67 unassigned subfamily M67B unassigned peptidases MER0154906 trd_1310
MQ M29 unassigned family M29 unassigned peptidases MER0121581 trd_A0613
MT M81 unassigned family M81 unassigned peptidases MER0223186 trd_0885
MT M81 unassigned family M81 unassigned peptidases MER0223187 trd_1745
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0279892 flhB trd_A0037
PA S1 non-peptidase homologue subfamily S1B non-peptidase homologues MER0121563 trd_A0292
PA S1 unassigned subfamily S1B unassigned peptidases MER0154901 trd_1905
PA S1 unassigned subfamily S1C unassigned peptidases MER0121564 trd_A0315
PA S1 unassigned subfamily S1C unassigned peptidases MER0121566 trd_A0320
PA S1 unassigned subfamily S1C unassigned peptidases MER0121579 trd_A0606
PA S1 unassigned subfamily S1C unassigned peptidases MER0121545 trd_A0117
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0106008 purF trd_0750
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0154883 trd_1105
PB C44 C44.A08 glutamine-fructose-6-phosphate transaminase precursor (Dictyostelium discoideum) MER0106084 glmS trd_0743
PB C45 unassigned family C45 unassigned peptidases MER0154871 trd_1743
PB S45 S45.003 cephalosporin C acylase precursor MER0097246 trd_1119
PB T1 T01.007 CodW component of CodWX peptidase MER0097177 hslV trd_1604
PB T2 unassigned family T2 unassigned peptidases MER0121573 trd_A0521
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0106104 ggt trd_0604
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0106576 ggt trd_0358
PB T3 unassigned family T3 unassigned peptidases MER0097231 ggt trd_1331
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0106969 trd_0103
PC C26 C26.957 GMP synthase MER0154886 guaA trd_1184
PC C26 C26.964 CTP synthetase MER0154900 pyrG trd_1236
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0106858 hisH trd_0180
PC C26 C26.A32 imidazoleglycerol-phosphate synthase (Pyrococcus furiosus) MER0107187 pdxT trd_0025
PC C26 non-peptidase homologue family C26 non-peptidase homologues MER0154896 trd_1934
PC C26 unassigned family C26 unassigned peptidases MER0106776 carA trd_0213
PC C26 unassigned family C26 unassigned peptidases MER0154904 trd_1022
PC C56 C56.001 PfpI peptidase MER0107188 trd_0011
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0106044 purQ trd_0748
PE P1 P01.101 pantetheinyl hydrolase ThnT precursor MER0105036 trd_0951
SB S8 unassigned subfamily S8A unassigned peptidases MER0097156 trd_1703
SB S8 unassigned subfamily S8A unassigned peptidases MER0121585 trd_A0692
SB S8 unassigned subfamily S8A unassigned peptidases MER0154879 trd_1587
SC S9 S09.071 trilobed protease MER0106727 trd_0264
SC S9 S09.071 trilobed protease MER0121577 trd_A0567
SC S9 unassigned subfamily S9C unassigned peptidases MER0121580 trd_A0610
SC S9 unassigned subfamily S9C unassigned peptidases MER0121595 trd_A0889
SC S9 unassigned family S9 unassigned peptidases MER0154875 trd_1687
SC S9 unassigned family S9 unassigned peptidases MER0154887 trd_1160
SC S9 unassigned family S9 unassigned peptidases MER0154885 trd_1492 trd_1492
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0121541 trd_A0927
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0121589 trd_A0736
SC S33 unassigned family S33 unassigned peptidases MER0097228 trd_1390
SC S33 unassigned family S33 unassigned peptidases MER0106575 metX trd_0368
SC S33 unassigned family S33 unassigned peptidases MER0106609 trd_0339
SC S33 unassigned family S33 unassigned peptidases MER0106105 trd_0560
SC S33 unassigned family S33 unassigned peptidases MER0121550 trd_A0259
SC S33 unassigned family S33 unassigned peptidases MER0121542 trd_A0930
SC S33 unassigned family S33 unassigned peptidases MER0121549 trd_A0258
SC S33 unassigned family S33 unassigned peptidases MER0121574 trd_A0550
SE S11 S11.004 K15-type DD-transpeptidase MER0121565 trd_A0317
SE S11 unassigned family S11 unassigned peptidases MER0154884 trd_1353
SE S11 unassigned family S11 unassigned peptidases MER0106573 trd_0436
SE S11 unassigned family S11 unassigned peptidases MER0106568 trd_0441
SE S11 unassigned family S11 unassigned peptidases MER0106185 trd_0506
SE S12 S12.006 class C beta-lactamase MER0097262 trd_1089
SE S12 S12.950 esterase EstB MER0121587 trd_A0708
SE S12 unassigned family S12 unassigned peptidases MER0121543 trd_A0011
SF S24 S24.001 repressor LexA MER0106099 lexA trd_0666
SF S26 unassigned subfamily S26A unassigned peptidases MER0105135 lepB trd_0788
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0154895 radA trd_1034
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0154913 trd_A0017
SJ S16 unassigned family S16 unassigned peptidases MER0121570 trd_A0412
SJ S16 unassigned family S16 unassigned peptidases MER0097273 lon trd_1023
SJ S16 unassigned family S16 unassigned peptidases MER0097188 lon trd_1562
SK S14 S14.001 peptidase Clp (type 1) MER0154876 clpP trd_1202
SK S41 S41.010 CtpC peptidase MER0106288 trd_0487
SK S49 non-peptidase homologue subfamily S49C non-peptidase homologues MER1072137 menB
SK S49 unassigned subfamily S49B unassigned peptidases MER0097238 trd_1269
SK S49 unassigned subfamily S49B unassigned peptidases MER0105285 trd_0764
SK S49 unassigned subfamily S49B unassigned peptidases MER0154903 trd_1267
ST S54 S54.027 RhoII peptidase (Haloferax volcanii) and similar MER0106691 trd_0277

GENOME ANALYSIS: Comparison with 19 completely sequenced genomes from phylum Chloroflexi
Family Comment
C39 significant presence (1 homologues)
M81 significant presence (2 homologues)
N6 significant presence (1 homologues)
S49 lineage specific expansion (4 homologues)
T1 significant presence (1 homologues)