Phaeobacter gallaeciensis

Taxonomy
Taxonomy database identifier: 60890
Superkingdom Bacteria
Phylum Proteobacteria
Class Alphaproteobacteria
Order Rhodobacterales
Family Rhodobacteraceae
Genus Phaeobacter
Species gallaeciensis
Peptidase View peptidase sequences from Phaeobacter gallaeciensis
Count of known and putative peptidases: 60, non-peptidase homologues 26
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AA A32 A32.002 RC1339 g.p. (Rickettsia conorii) MER0241778
AC A8 unassigned family A8 unassigned peptidases MER0122946 lspA RGBS107_05129
AC A8 unassigned family A8 unassigned peptidases MER0122626 lspA RG210_08114
AC A8 unassigned family A8 unassigned peptidases MER0511039
CL C82 C82.003 ykuD transpeptidase MER0462015
CL C82 C82.A01 LdtF protein (Escherichia coli) MER0244040
CL C82 non-peptidase homologue subfamily C82A non-peptidase homologues MER0740306 Gal_04021
CL C82 unassigned subfamily C82A unassigned peptidases MER0739978 Gal_04058
CL C82 unassigned subfamily C82A unassigned peptidases MER0742160 Gal_04070
CL C82 unassigned subfamily C82A unassigned peptidases MER0463518
CL C82 unassigned subfamily C82A unassigned peptidases MER0463517
CO C40 C40.001 dipeptidyl-peptidase VI (bacteria) MER0122245 RGBS107_04491
CO C40 C40.001 dipeptidyl-peptidase VI (bacteria) MER0506756
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0721639 Gal_01562
CO C40 unassigned family C40 unassigned peptidases MER0172077 RG210_15290
G- G5 unassigned family G5 unassigned peptidases MER0911150 PGA2_c30380
G- G5 unassigned family G5 unassigned peptidases MER0936804 Gal_00078
G- G5 unassigned family G5 unassigned peptidases MER0506757
GB G2 unassigned family G2 unassigned peptidases MER0113566
GB G2 unassigned family G2 unassigned peptidases MER0239660
GC G4 non-peptidase homologue family G4 non-peptidase homologues MER0353383
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0335210 pepN PGA2_c09760
MA M3 unassigned subfamily M3A unassigned peptidases MER0144058 RGBS107_01958
MA M3 unassigned subfamily M3B unassigned peptidases MER0124809 RG210_02691
MA M10 unassigned subfamily M10B unassigned peptidases MER0122730
MA M10 unassigned subfamily M10B unassigned peptidases MER0506770
MA M10 unassigned subfamily M10B unassigned peptidases MER0506807
MA M10 unassigned subfamily M10B unassigned peptidases MER0467402
MA M10 unassigned subfamily M10B unassigned peptidases MER0467384
MA M10 unassigned family M10 unassigned peptidases MER0467418
MA M32 unassigned family M32 unassigned peptidases MER0137530 RGBS107_14681
MA M41 unassigned family M41 unassigned peptidases MER0125034 ftsH RGBS107_10031
MA M48 unassigned subfamily M48C unassigned peptidases MER0883104 Gal_01434/PGA2_c18670
MA M48 unassigned subfamily M48C unassigned peptidases MER0506765
MA M48 unassigned family M48 unassigned peptidases MER0506775
MA M56 unassigned family M56 unassigned peptidases MER0899439 Gal_02991
MA M78 unassigned family M78 unassigned peptidases MER0910012 PGA2_c00080
MD M15 non-peptidase homologue family M15 non-peptidase homologues MER0171883
MD M74 unassigned family M74 unassigned peptidases MER1263650
MD M74 unassigned family M74 unassigned peptidases MER0142249 mepA RG210_05902
ME M16 M16.003 mitochondrial processing peptidase beta-subunit MER0123625 RGBS107_10206
ME M16 M16.019 YMXG peptidase MER0176980 PGA2_c31090
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0383593 PGA2_c31080
ME M16 unassigned subfamily M16B unassigned peptidases MER0764834
ME M16 unassigned subfamily M16B unassigned peptidases MER0763081
MF M17 unassigned family M17 unassigned peptidases MER0117119 pepA RGBS107_16993
MF M17 unassigned family M17 unassigned peptidases MER0118367 RG210_05697
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0141208 map RG210_10127
MG M24 non-peptidase homologue subfamily M24B non-peptidase homologues MER0511076
MG M24 non-peptidase homologue subfamily M24B non-peptidase homologues MER0176819 PGA2_c00190
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0396398 PGA1_c23130
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0483569
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0164140
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0483573
MG M24 unassigned subfamily M24A unassigned peptidases MER0657214
MG M24 unassigned subfamily M24B unassigned peptidases MER0175850 PGA1_c21160
MG M24 unassigned subfamily M24B unassigned peptidases MER0176389
MG M24 unassigned subfamily M24B unassigned peptidases MER0481907
MG M24 unassigned subfamily M24B unassigned peptidases MER0483570
MH M20 unassigned subfamily M20A unassigned peptidases MER1221175
MH M20 unassigned subfamily M20A unassigned peptidases MER0475021
MH M20 unassigned family M20D unassigned peptidases MER0119400 RG210_14655
MH M20 unassigned family M20D unassigned peptidases MER0125205 RG210_19175
MH M20 unassigned family M20D unassigned peptidases MER0140927 RGBS107_12137
MH M20 unassigned family M20D unassigned peptidases MER0117018 RG210_19165
MH M20 unassigned family M20D unassigned peptidases MER0371679 hipO PGA1_c19940
MH M20 unassigned family M20D unassigned peptidases MER0373006 PGA1_262p00740
MH M20 unassigned family M20D unassigned peptidases MER0506766
MH M20 unassigned family M20D unassigned peptidases MER0506790
MH M20 unassigned family M20D unassigned peptidases MER0506791
MH M20 unassigned family M20D unassigned peptidases MER0507462
MH M20 unassigned subfamily M20F unassigned peptidases MER0506774
MH M20 unassigned family M20 unassigned peptidases MER0374107 PGA2_c14580
MH M20 unassigned family M20 unassigned peptidases MER0506780
MH M20 unassigned family M20 unassigned peptidases MER0506784
MH M20 unassigned family M20 unassigned peptidases MER0506792
MH M20 unassigned family M20 unassigned peptidases MER0171840
MH M20 unassigned family M20 unassigned peptidases MER0472574
MJ M19 non-peptidase homologue family M19 non-peptidase homologues MER0341513 PGA1_262p01800
MJ M19 non-peptidase homologue family M19 non-peptidase homologues MER0117017 RGBS107_00555
MJ M19 unassigned family M19 unassigned peptidases MER0119297 RGBS107_15236
MJ M19 unassigned family M19 unassigned peptidases MER0122244 RGBS107_16828
MJ M19 unassigned family M19 unassigned peptidases MER0506777
MJ M38 M38.973 dihydropyrimidinase MER0506783
MJ M38 M38.982 urease MER0506804
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0871306 hutI
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0506761
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0506769
MJ M38 unassigned family M38 unassigned peptidases MER0506801
MJ M38 unassigned family M38 unassigned peptidases MER0506808
MM M50 unassigned family M50 unassigned peptidases MER0506781
MO M23 M23.009 Mername-AA292 peptidase MER0172029
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0511038
MO M23 non-peptidase homologue family M23 non-peptidase homologues MER0506788
MO M23 unassigned subfamily M23B unassigned peptidases MER0506764
MO M23 unassigned subfamily M23B unassigned peptidases MER0479222
MO M23 unassigned family M23 unassigned peptidases MER0506805
MS M75 M75.001 imelysin MER0191358
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0506796
MU M103 M103.UNW family M103 non-peptidase homologues MER0124345 RG210_07790
NB N6 unassigned family N6 unassigned peptide lyases MER0405723 flhB
PA S1 S01.260 B1598 peptidase MER0506758
PA S1 S01.260 B1598 peptidase MER0488532 RGBS107_03528
PA S1 S01.260 B1598 peptidase MER0488533
PA S1 S01.260 B1598 peptidase MER0210555
PA S1 S01.260 B1598 peptidase MER0488535
PA S1 S01.260 B1598 peptidase MER0488537 RG210_09897
PA S1 non-peptidase homologue subfamily S1B non-peptidase homologues MER0506795
PA S1 unassigned subfamily S1A unassigned peptidases MER0488536
PA S1 unassigned subfamily S1C unassigned peptidases MER0407261 degP PGA2_c21650
PA S1 unassigned subfamily S1C unassigned peptidases MER0209866 degQ PGA1_c01920
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0120084 RGBS107_12482
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0458868
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0455905
PB S45 S45.003 cephalosporin C acylase precursor MER0143570 RG210_16630
PB T1 T01.006 HslV component of HslUV peptidase MER0123909 hslV RGBS107_06344
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0141606 RG210_10552
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0120552 RG210_07929
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0120640 RGBS107_05314
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0436044
PC C26 C26.957 GMP synthase MER0443778
PC C26 C26.964 CTP synthetase MER0449162
PC C26 unassigned family C26 unassigned peptidases MER0506760
PC C26 unassigned family C26 unassigned peptidases MER0506767
PC C26 unassigned family C26 unassigned peptidases MER0441398
PC C26 unassigned family C26 unassigned peptidases MER0449687 RGBS107_02873
PC C26 unassigned family C26 unassigned peptidases MER0444485
PC C26 unassigned family C26 unassigned peptidases MER0451044 RGBS107_12022
PC C26 unassigned family C26 unassigned peptidases MER0448701
PC C26 unassigned family C26 unassigned peptidases MER0447770
PC C56 C56.001 PfpI peptidase MER0137336 RGBS107_03238
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0163259
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0175800
PE P1 unassigned family P01 unassigned peptidases MER0506754
PE T5 T05.001 ornithine acetyltransferase precursor MER0176858
SB S8 unassigned subfamily S8A unassigned peptidases MER0511052
SC S9 S09.951 brefeldin A esterase MER0506768
SC S9 S09.A39 YeiG protein (Escherichi coli) MER0506755
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0506759
SC S9 unassigned family S9 unassigned peptidases MER0506772
SC S9 unassigned family S9 unassigned peptidases MER0477997
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1022102 Gal_01867/PGA2_c15230
SC S15 unassigned family S15 unassigned peptidases MER1026289 PGA2_c25860
SC S15 unassigned family S15 unassigned peptidases MER0506762
SC S33 S33.001 prolyl aminopeptidase MER0176601 RGBS107_06049
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0215388
SC S33 unassigned family S33 unassigned peptidases MER0506771
SC S33 unassigned family S33 unassigned peptidases MER0506773
SC S33 unassigned family S33 unassigned peptidases MER0506785
SC S33 unassigned family S33 unassigned peptidases MER0506794
SC S33 unassigned family S33 unassigned peptidases MER0506798
SC S33 unassigned family S33 unassigned peptidases MER0210255
SC S33 unassigned family S33 unassigned peptidases MER0214567
SC S33 unassigned family S33 unassigned peptidases MER0211543
SC S33 unassigned family S33 unassigned peptidases MER0489983
SE S11 S11.A01 penP g.p. (Bacillus subtilis) MER0506793
SE S11 unassigned family S11 unassigned peptidases MER0120474 RG210_09722
SE S11 unassigned family S11 unassigned peptidases MER0948845 bla
SE S11 unassigned family S11 unassigned peptidases MER0143255 RG210_02247
SE S12 S12.950 esterase EstB MER0419968 PGA2_c15550
SE S12 unassigned family S12 unassigned peptidases MER0506797
SE S13 unassigned family S13 unassigned peptidases MER0117995 RG210_11628
SF S24 S24.001 repressor LexA MER0123145 lexA RGBS107_15571
SF S24 unassigned family S24 unassigned peptidases MER0506778
SF S24 unassigned family S24 unassigned peptidases MER0506786
SF S26 S26.001 signal peptidase I MER0144057 RGBS107_07484
SH S78 S78.001 prohead peptidase (bacteriophage HK97) MER0143672 RGBS107_18368
SH S78 S78.001 prohead peptidase (bacteriophage HK97) MER0124344 RGBS107_16016
SH S78 unassigned family S78 unassigned peptidases MER1087348 Gal_01551
SJ S16 S16.001 Lon-A peptidase MER0120472 RG210_14246
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0475313
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0506763
SK S14 S14.001 peptidase Clp (type 1) MER0119714 clpP RG210_17840
SK S14 non-peptidase homologue family S14 non-peptidase homologues MER1015648 Gal_04446
SK S14 non-peptidase homologue family S14 non-peptidase homologues MER0506779
SK S41 S41.004 C-terminal processing peptidase-3 MER0143766 RGBS107_08370
SK S49 non-peptidase homologue subfamily S49A unassigned non-peptidase homologues MER0119401 RG210_05042
SK S49 non-peptidase homologue subfamily S49B non-peptidase homologues MER1068385 Gal_04446
ST S54 S54.027 RhoII peptidase (Haloferax volcanii) and similar MER0506787
ST S54 non-peptidase homologue family S54 non-peptidase homologues MER1075596 Gal_00753/PGA2_c24800
ST S54 unassigned family S54 unassigned peptidases MER1083596 PGA2_c11570

GENOME ANALYSIS: Comparison with 100 completely sequenced genomes from family Rhodobacteraceae
Family Comment
G2 significant presence (2 homologues)
G4 significant presence (1 homologues)
M19 lineage specific expansion (5 homologues)
M20 lineage specific expansion (19 homologues)
M23 lineage specific expansion (6 homologues)
M78 significant presence (1 homologues)