Dokdonia donghaensis

Taxonomy
Taxonomy database identifier: 326320
Superkingdom Bacteria
Phylum Bacteroidetes
Class Flavobacteria
Order Flavobacteriales
Family Flavobacteriaceae
Genus Dokdonia
Species donghaensis
Peptidase View peptidase sequences from Dokdonia donghaensis
Count of known and putative peptidases: 72, non-peptidase homologues 28
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0063327 lspA MED134_08996
CA C1 unassigned subfamily C1A unassigned peptidases MER0083352 MED134_14006
CA C1 unassigned subfamily C1B unassigned peptidases MER0062132 MED134_03874
CA C110 C110.UPW family C110 unassigned peptidases MER0626426
CA C39 non-peptidase homologue family C39 non-peptidase homologues MER0715026 NV36_08565
CD C25 unassigned family C25 unassigned peptidases MER0711080 NV36_11560
CD C25 unassigned family C25 unassigned peptidases MER0435970
CO C40 C40.009 NLP/P60 (Nostoc punctiforme)-like putative peptidase MER0120527 MED134_05374
CO C40 unassigned family C40 unassigned peptidases MER0377765 MED134_00880
MA M1 unassigned family M1 unassigned peptidases MER0063538 MED134_04139
MA M1 unassigned family M1 unassigned peptidases MER0083358 MED134_12271
MA M1 unassigned family M1 unassigned peptidases MER0079034 MED134_04279
MA M1 unassigned family M1 unassigned peptidases MER0083365 MED134_09161
MA M1 unassigned family M1 unassigned peptidases MER0464941
MA M3 unassigned subfamily M3A unassigned peptidases MER0094352 MED134_12176
MA M12 unassigned subfamily M12A unassigned peptidases MER1215461
MA M13 unassigned family M13 unassigned peptidases MER0063060 MED134_05789
MA M13 unassigned family M13 unassigned peptidases MER0081340 MED134_09856
MA M36 unassigned family M36 unassigned peptidases MER0107926 MED134_11205
MA M36 unassigned family M36 unassigned peptidases MER0107928 MED134_08871
MA M36 unassigned family M36 unassigned peptidases MER0107929 MED134_10166
MA M41 M41.A17 DDB_G0284249 g.p. (Dictyostelium discoideum) MER0179120 ftsH MED134_01425
MA M48 unassigned subfamily M48C unassigned peptidases MER0888907 NV36_04250
MA M49 M49.003 dipeptidyl-peptidase IIIB (Bacteroides thetaiotaomicron-type) MER0077190 MED134_03964
MA M56 unassigned family M56 unassigned peptidases MER0933961 NV36_02380
MA M56 unassigned family M56 unassigned peptidases MER0934947 NV36_09980
MA M56 unassigned family M56 unassigned peptidases MER0934064 NV36_09985
MA M57 unassigned family M57 unassigned peptidases MER0125641 MED134_04014
MA M61 unassigned family M61 unassigned peptidases MER0117837 MED134_08036
MA M90 unassigned family M90 unassigned peptidases MER0286990 MED134_00810
MA M97 unassigned family M97 unassigned peptidases MER0494776 MED134_11796
MC M14 non-peptidase homologue subfamily M14A non-peptidase homologues MER0832966 NV36_04365
MC M14 non-peptidase homologue subfamily M14A non-peptidase homologues MER1232857
MC M14 non-peptidase homologue subfamily M14B non-peptidase homologues MER0836639 NV36_04065
MC M14 non-peptidase homologue subfamily M14B non-peptidase homologues MER0469271
MC M14 non-peptidase homologue subfamily M14B non-peptidase homologues MER0242628
MC M14 non-peptidase homologue family M14 non-peptidase homologues MER0083368 MED134_04404
MC M14 unassigned subfamily M14A unassigned peptidases MER0083359 MED134_02610
MC M14 unassigned subfamily M14A unassigned peptidases MER0083371 MED134_05419
MD M15 unassigned subfamily M15B unassigned peptidases MER0083356 MED134_12211
MD M15 unassigned subfamily M15D unassigned peptidases MER0063997 MED134_03814
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0063059 MED134_01025
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0169519
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0169518
ME M16 unassigned subfamily M16B unassigned peptidases MER0063061 MED134_06099
ME M16 unassigned subfamily M16B unassigned peptidases MER0063062 MED134_07124
MG M24 unassigned subfamily M24A unassigned peptidases MER0083361 MED134_00370
MG M24 unassigned subfamily M24B unassigned peptidases MER0083354 MED134_11140
MH M20 M20.003 peptidase T MER0063540 pepT MED134_06449
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0170338 MED134_14256
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0847712 NV36_11415
MH M20 unassigned subfamily M20A unassigned peptidases MER1225683
MH M20 unassigned subfamily M20C unassigned peptidases MER0100503 MED134_13776
MH M20 unassigned family M20D unassigned peptidases MER0124105 MED134_05209
MH M20 unassigned family M20D unassigned peptidases MER0126206 MED134_05224
MH M20 unassigned subfamily M20F unassigned peptidases MER0852286 NV36_10090
MH M20 unassigned family M20 unassigned peptidases MER0063534 MED134_08211
MH M20 unassigned family M20 unassigned peptidases MER0178972 MED134_10231
MH M28 non-peptidase homologue subfamily M28E non-peptidase homologues MER0083369 MED134_05229
MH M28 unassigned subfamily M28B unassigned peptidases MER0083367 MED134_04194
MH M28 unassigned subfamily M28D unassigned peptidases MER0063539 MED134_06269
MH M28 unassigned subfamily M28D unassigned peptidases MER0063797 MED134_13441
MH M28 unassigned subfamily M28E unassigned peptidases MER1058092
MH M28 unassigned family M28 unassigned peptidases MER0063537 MED134_09846
MH M28 unassigned family M28 unassigned peptidases MER0063532 MED134_12076
MH M28 unassigned family M28 unassigned peptidases MER0063796
MH M42 unassigned family M42 unassigned peptidases MER0063996 MED134_14046
MJ M19 unassigned family M19 unassigned peptidases MER0119933 MED134_05699
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0869259 NV36_01050
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0867828 NV36_07005
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0863262 NV36_03885
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0871446 hutI
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0869990 NV36_13465
MM M50 unassigned family M50 unassigned peptidases MER0898291 NV36_09945
MO M23 M23.009 Mername-AA292 peptidase MER0063795 MED134_11631
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0063536 MED134_09601
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0063533 MED134_07806
MO M23 unassigned subfamily M23B unassigned peptidases MER0063535 MED134_09346
MO M23 unassigned subfamily M23B unassigned peptidases MER0080255 MED134_14126
MO M23 unassigned subfamily M23B unassigned peptidases MER0479549
MU M103 M103.UNW family M103 non-peptidase homologues MER0170444
PA S1 S01.453 MucD peptidase MER0062023 MED134_03319
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0458739
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0169711
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0458738
PB T2 unassigned family T2 unassigned peptidases MER0120286 MED134_00560
PB T2 unassigned family T2 unassigned peptidases MER0169865
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0107367 MED134_06174
PB T3 unassigned family T3 unassigned peptidases MER0170151 MED134_03649
PC C26 C26.957 GMP synthase MER0443254
PC C26 C26.959 TRP3 protein MER0438769
PC C26 C26.964 CTP synthetase MER0445213
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0445032
PC C26 unassigned family C26 unassigned peptidases MER0442453
PC C56 C56.001 PfpI peptidase MER0060810 MED134_04464
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0060228 MED134_04389
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0158975
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0170056
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0170105
PC S51 S51.002 alpha-aspartyl dipeptidase (eukaryote) MER0063237 MED134_12251
SB S8 S08.126 minor extracellular protease (Bacillus licheniformis) MER0977039 NV36_13310
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0062554 MED134_12886
SB S8 unassigned subfamily S8A unassigned peptidases MER0060227 MED134_09156
SB S8 unassigned subfamily S8A unassigned peptidases MER0062556 MED134_08971
SB S8 unassigned subfamily S8A unassigned peptidases MER0062555 MED134_03984
SC S9 S09.010 oligopeptidase B MER0139251 MED134_14471
SC S9 S09.013 dipeptidyl-peptidase 4 (bacteria-type 2) MER0083362 MED134_00860
SC S9 non-peptidase homologue subfamily S9B non-peptidase homologues MER1002892 NV36_04450
SC S9 unassigned subfamily S9A unassigned peptidases MER0083366 MED134_10016
SC S9 unassigned subfamily S9C unassigned peptidases MER0083364 MED134_08711
SC S9 unassigned subfamily S9C unassigned peptidases MER0477602 MED134_07104
SC S9 unassigned family S9 unassigned peptidases MER0208685 MED134_04909
SC S10 unassigned family S10 unassigned peptidases MER0083355 MED134_04019
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1026999 NV36_04450
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1019186 NV36_06160
SC S33 unassigned family S33 unassigned peptidases MER0213102
SC S33 unassigned family S33 unassigned peptidases MER0211182
SE S12 non-peptidase homologue family S12 non-peptidase homologues MER1011586 NV36_14200
SE S12 non-peptidase homologue family S12 non-peptidase homologues MER1009471 NV36_12585
SE S12 unassigned family S12 unassigned peptidases MER1025216 NV36_08315
SE S12 unassigned family S12 unassigned peptidases MER1004443 NV36_05340
SE S12 unassigned family S12 unassigned peptidases MER0123122 MED134_03304
SE S12 unassigned family S12 unassigned peptidases MER0420171 MED134_03749
SE S12 unassigned family S12 unassigned peptidases MER0119463 MED134_08621
SE S12 unassigned family S12 unassigned peptidases MER0117726 MED134_11821
SF S24 non-peptidase homologue family S24 non-peptidase homologues MER1042684 NV36_08665
SF S26 unassigned subfamily S26A unassigned peptidases MER0063326 MED134_01930
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER1038637 NV36_04445
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER1034788 NV36_07705
SJ S16 unassigned family S16 unassigned peptidases MER0060809 MED134_02900
SK S14 S14.001 peptidase Clp (type 1) MER0061981 clpP2 MED134_07541
SK S14 S14.005 peptidase Clp (type 5) MER0061984 clpP1 MED134_10261
SK S41 S41.001 C-terminal processing peptidase-1 MER0063058 MED134_00900
SK S41 S41.004 C-terminal processing peptidase-3 MER0061982 MED134_08236
SK S41 S41.012 Pep putative peptidase (Vibrio-type) MER0062133 MED134_04119
SK S41 unassigned subfamily S41A unassigned peptidases MER0061983 MED134_09191
SS S66 unassigned family S66 unassigned peptidases MER0083363 MED134_08611
ST S54 S54.025 At5g25752 rhomboid peptidase MER0113064 MED134_06149
ST S54 unassigned family S54 unassigned peptidases MER1081200 NV36_05080
ST S54 unassigned family S54 unassigned peptidases MER1079853 NV36_11870
ST S54 unassigned family S54 unassigned peptidases MER1083306 NV36_05085

GENOME ANALYSIS: Comparison with 115 completely sequenced genomes from family Flavobacteriaceae
Family Comment
C110 significant presence (1 homologues)
C39 significant presence (1 homologues)
M103 significant presence (1 homologues)
M19 significant presence (1 homologues)
M36 significant presence (3 homologues)
M49 significant presence (1 homologues)
M57 significant presence (1 homologues)
M90 significant presence (1 homologues)
S10 significant presence (1 homologues)