Rhodanobacter denitrificans

Taxonomy
Taxonomy database identifier: 666685
Superkingdom Bacteria
Phylum Proteobacteria
Class Gammaproteobacteria
Order Xanthomonadales
Family Xanthomonadaceae
Genus Rhodanobacter
Species sp. 2APBS1
Peptidase View peptidase sequences from Rhodanobacter denitrificans
Count of known and putative peptidases: 59, non-peptidase homologues 8
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0324564 lspA UUC_08591
AC A8 unassigned family A8 unassigned peptidases MER0400948 lspA UUC_04856
AD A24 A24.001 type 4 prepilin peptidase 1 MER0262086 UUC_16075
CA C39 C39.005 colicin V processing peptidase MER0302354
CA C39 C39.005 colicin V processing peptidase MER0368854 UUC_13178
CA C96 non-peptidase homologue family C96 non-peptidase homologues MER0400765
CO C40 C40.006 PgpA peptidase MER0376638 UUC_08211
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0724822 R2APBS1_3408
CO C40 unassigned family C40 unassigned peptidases MER0452396
G- G5 unassigned family G5 unassigned peptidases MER0936494 R2APBS1_1150
G- G5 unassigned family G5 unassigned peptidases MER0936746 R2APBS1_0619
G- G5 unassigned family G5 unassigned peptidases MER0940294 R2APBS1_0240
GC G4 non-peptidase homologue family G4 non-peptidase homologues MER0309294 R2APBS1_2754
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0335168
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0335155 pepN UUC_15138
MA M1 M01.031 cold-active aminopeptidase (Colwellia psychrerythraea)-type peptidase MER0335543
MA M1 M01.031 cold-active aminopeptidase (Colwellia psychrerythraea)-type peptidase MER0397201 UUC_15548
MA M1 unassigned family M1 unassigned peptidases MER0336340
MA M1 unassigned family M1 unassigned peptidases MER0465178
MA M1 unassigned family M1 unassigned peptidases MER0465179
MA M1 unassigned family M1 unassigned peptidases MER0334822 UUC_00875
MA M1 unassigned family M1 unassigned peptidases MER0336431 UUC_18065
MA M3 M03.004 oligopeptidase A MER0340603
MA M3 M03.005 peptidyl-dipeptidase Dcp MER0343775
MA M3 unassigned subfamily M3A unassigned peptidases MER0344321
MA M4 M04.016 PA peptidase (Aeromonas-type) MER0336671 UUC_16815
MA M13 unassigned family M13 unassigned peptidases MER1225525
MA M13 unassigned family M13 unassigned peptidases MER0289154 UUC_11854
MA M13 unassigned family M13 unassigned peptidases MER0338730 UUC_13148
MA M13 unassigned family M13 unassigned peptidases MER0338663 UUC_14523
MA M41 M41.001 FtsH peptidase MER0300692 ftsH UUC_09723
MA M48 M48.002 HtpX peptidase MER0296168
MA M48 M48.002 HtpX peptidase MER0348634 htpX UUC_02346
MA M48 M48.019 GSU1437 putative peptidase MER0887261 R2APBS1_2608
MA M48 unassigned subfamily M48B unassigned peptidases MER0349360 UUC_09038
MA M48 unassigned subfamily M48C unassigned peptidases MER0889549 R2APBS1_2557
MA M56 unassigned family M56 unassigned peptidases MER0899469 R2APBS1_0885
MA M56 unassigned family M56 unassigned peptidases MER0934550 R2APBS1_1164
MA M56 unassigned family M56 unassigned peptidases MER0899718 R2APBS1_3611
MA M61 unassigned family M61 unassigned peptidases MER0310202 UUC_13308
MA M61 unassigned family M61 unassigned peptidases MER0310211 UUC_11169
MA M61 unassigned family M61 unassigned peptidases MER0384660 UUC_09533
MA M90 unassigned family M90 unassigned peptidases MER0286883
MA M95 unassigned family M95 unassigned peptidases MER0473968
MD M15 unassigned subfamily M15D unassigned peptidases MER0312450 UUC_06312
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0470764
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0391199
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0391192 UUC_15493
ME M16 unassigned subfamily M16B unassigned peptidases MER0391928
ME M16 unassigned subfamily M16B unassigned peptidases MER0391115
ME M16 unassigned subfamily M16B unassigned peptidases MER0391142 UUC_13213
MF M17 M17.003 PepA aminopeptidase MER0340849 UUC_17990
MF M17 non-peptidase homologue family M17 non-peptidase homologues MER0340892 UUC_17995
MF M17 unassigned family M17 unassigned peptidases MER0340372
MF M17 unassigned family M17 unassigned peptidases MER0289705 pepA UUC_14833
MF M17 unassigned family M17 unassigned peptidases MER0340861 UUC_17985
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0405893 map UUC_11674
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0318925
MG M24 M24.003 Xaa-Pro dipeptidase (bacteria-type) MER0482511
MG M24 unassigned subfamily M24B unassigned peptidases MER0407105 UUC_06102
MG M24 unassigned subfamily M24B unassigned peptidases MER0482510
MG M24 unassigned subfamily M24B unassigned peptidases MER0319306
MH M20 M20.A18 DDB_G0279291 g.p. (Dictyostelium discoideum) MER0852665 R2APBS1_1109
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0372861
MH M20 unassigned subfamily M20A unassigned peptidases MER0854128 R2APBS1_0802
MH M20 unassigned subfamily M20A unassigned peptidases MER0473506
MH M20 unassigned family M20D unassigned peptidases MER0400411 UUC_07656
MH M28 non-peptidase homologue subfamily M28E non-peptidase homologues MER1250362
MH M28 non-peptidase homologue subfamily M28E non-peptidase homologues MER0322069
MH M28 non-peptidase homologue subfamily M28E non-peptidase homologues MER0208301
MH M28 non-peptidase homologue subfamily M28E non-peptidase homologues MER0321230 UUC_14973
MH M28 non-peptidase homologue family M28 non-peptidase homologues MER0322750 UUC_05266
MH M28 unassigned subfamily M28B unassigned peptidases MER0195781
MH M28 unassigned subfamily M28B unassigned peptidases MER0324080 UUC_05251
MH M28 unassigned subfamily M28D unassigned peptidases MER0320939
MH M28 unassigned subfamily M28D unassigned peptidases MER0320940 UUC_05882
MH M28 unassigned subfamily M28E unassigned peptidases MER1250342
MH M28 unassigned subfamily M28E unassigned peptidases MER0272830
MH M28 unassigned subfamily M28E unassigned peptidases MER0275762 UUC_10437
MJ M19 unassigned family M19 unassigned peptidases MER0341346 UUC_06302
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0865624 R2APBS1_0790
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0859805 hutI
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0868452 R2APBS1_0099
MM M50 unassigned subfamily M50B unassigned peptidases MER0897411 R2APBS1_1035
MO M23 M23.009 Mername-AA292 peptidase MER0388058 UUC_16845
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0478195
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0480026
MO M23 unassigned subfamily M23B unassigned peptidases MER0404549 UUC_05542
MO M23 unassigned subfamily M23B unassigned peptidases MER0389090
MU M103 M103.UNW family M103 non-peptidase homologues MER0240415
MU M103 M103.UNW family M103 non-peptidase homologues MER0327068 UUC_11544
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0327377
PA S1 S01.453 MucD peptidase MER0407504
PA S1 unassigned subfamily S1A unassigned peptidases MER0488744
PA S1 unassigned subfamily S1B unassigned peptidases MER0966388 R2APBS1_2944
PA S1 unassigned subfamily S1C unassigned peptidases MER0966869 R2APBS1_0177
PA S1 unassigned subfamily S1C unassigned peptidases MER0327628
PA S46 S46.003 dipeptidyl-peptidase BII (Pseudoxanthomonas mexicana) MER0312720 UUC_06791
PA S46 S46.003 dipeptidyl-peptidase BII (Pseudoxanthomonas mexicana) MER0312706 UUC_06786
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0454785
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0459935
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0456763
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0459933
PB C44 unassigned family C44 unassigned peptidases MER0459934
PB S45 S45.002 cephalosporin acylase precursor MER0312311
PB S45 S45.003 cephalosporin C acylase precursor MER1064523 R2APBS1_2767
PB T1 T01.006 HslV component of HslUV peptidase MER0323594
PB T2 T02.007 Chryseobacterium meningosepticum-type N4-(beta-N-acetylglucosaminyl)-L-asparaginase MER0306915 UUC_09933
PB T2 unassigned family T2 unassigned peptidases MER1096812 R2APBS1_0886
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0307309 UUC_10177
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0436518
PC C26 C26.957 GMP synthase MER0443651
PC C26 C26.964 CTP synthetase MER0451747
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0448280
PC C26 non-peptidase homologue family C26 non-peptidase homologues MER0451944
PC C26 unassigned family C26 unassigned peptidases MER0446233
PC C26 unassigned family C26 unassigned peptidases MER0441060
PE P1 P01.003 BapF peptidase (Pseudomonas sp.) MER0316836
PE P1 P01.003 BapF peptidase (Pseudomonas sp.) MER0393221 UUC_00625
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0968243 R2APBS1_0653
SB S8 unassigned subfamily S8A unassigned peptidases MER0973915 R2APBS1_1578
SB S8 unassigned subfamily S8A unassigned peptidases MER0988268 R2APBS1_2562
SB S8 unassigned subfamily S8A unassigned peptidases MER0971725 R2APBS1_3384
SB S8 unassigned subfamily S8A unassigned peptidases MER0980925 R2APBS1_2018
SC S9 S09.071 trilobed protease MER0328977
SC S9 S09.071 trilobed protease MER0329107 R2APBS1DRAFT_0392
SC S9 S09.076 prolyl oligopeptidase (Myxococcus xanthus) MER0326027
SC S9 S09.A77 dpf-6 g.p. (Caenorhabditis elegans) MER0490672
SC S9 S09.A96 DDB_G0281415 g.p. (Dictyostelium discoideum) MER0490674
SC S9 non-peptidase homologue subfamily S9C non-peptidase homologues MER1116859
SC S9 non-peptidase homologue subfamily S9C non-peptidase homologues MER1117751
SC S9 unassigned subfamily S9A unassigned peptidases MER0405009 R2APBS1_2449
SC S9 unassigned subfamily S9A unassigned peptidases MER1286945
SC S9 unassigned subfamily S9A unassigned peptidases MER0404932
SC S9 unassigned subfamily S9A unassigned peptidases MER0325951
SC S9 unassigned subfamily S9B unassigned peptidases MER0998956 R2APBS1_3612
SC S9 unassigned subfamily S9B unassigned peptidases MER0404930
SC S9 unassigned subfamily S9B unassigned peptidases MER0404689
SC S9 unassigned subfamily S9D unassigned peptidases MER0692406 R2APBS1_0924
SC S10 unassigned family S10 unassigned peptidases MER0490673
SC S10 unassigned family S10 unassigned peptidases MER0490675
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1020634 R2APBS1_0122
SC S33 S33.001 prolyl aminopeptidase MER0307810 UUC_15568
SC S33 S33.001 prolyl aminopeptidase MER0307792
SC S33 S33.001 prolyl aminopeptidase MER0380897 UUC_11744
SE S11 S11.003 penicillin-binding protein 6 MER0352162 UUC_17850
SE S11 unassigned family S11 unassigned peptidases MER0351113 UUC_17855
SE S12 unassigned family S12 unassigned peptidases MER1005020 R2APBS1_2207
SE S12 unassigned family S12 unassigned peptidases MER0356216 UUC_06307
SE S12 unassigned family S12 unassigned peptidases MER0298086 UUC_06317
SE S12 unassigned family S12 unassigned peptidases MER0354995 UUC_09048
SE S12 unassigned family S12 unassigned peptidases MER0354407 UUC_13995
SE S12 unassigned family S12 unassigned peptidases MER0356054 UUC_14923
SF S24 S24.001 repressor LexA MER0304493
SF S24 S24.001 repressor LexA MER0375180 lexA UUC_03555
SF S24 S24.003 UmuD protein MER0375942 UUC_03665
SF S24 unassigned family S24 unassigned peptidases MER1029332 R2APBS1_1656
SF S24 unassigned family S24 unassigned peptidases MER1045331 R2APBS1_1874
SF S26 S26.001 signal peptidase I MER0266072 UUC_09863
SF S26 unassigned subfamily S26A unassigned peptidases MER1049132 R2APBS1_1991
SH S78 S78.001 prohead peptidase (bacteriophage HK97) MER0322949
SJ S16 S16.001 Lon-A peptidase MER0299790
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER1033395 R2APBS1_1181
SK S14 S14.001 peptidase Clp (type 1) MER0299203
SK S41 S41.001 C-terminal processing peptidase-1 MER0288491
SK S41 S41.004 C-terminal processing peptidase-3 MER0337645 UUC_04249
SK S41 unassigned subfamily S41A unassigned peptidases MER0338252 UUC_17645
SK S41 unassigned subfamily S41A unassigned peptidases MER0336978 UUC_17650
SK S49 unassigned subfamily S49A unassigned peptidases MER0298865
SK S49 unassigned subfamily S49B unassigned peptidases MER1067368 R2APBS1_1910
SK S49 unassigned subfamily S49B unassigned peptidases MER0208415 UUC_06697
SK S49 unassigned subfamily S49C unassigned peptidases MER1072536 R2APBS1_2459
SS S66 S66.002 murein tetrapeptidase LD-carboxypeptidase (Escherichia-type) MER0320372
ST S54 unassigned family S54 unassigned peptidases MER1074671 R2APBS1_1112
ST S54 unassigned family S54 unassigned peptidases MER1074660 R2APBS1_2682
ST S54 unassigned family S54 unassigned peptidases MER1078117 R2APBS1_3837