Sphingomonas sp. S17

Taxonomy
Taxonomy database identifier: 1007104
Superkingdom		Bacteria
Phylum		Proteobacteria
Class		Alphaproteobacteria
Order		Rhodospirillales
Family		Sphingomonadaceae
Genus		Sphingomonas
Species		sp. S17
Peptidase			View peptidase sequences from Sphingomonas sp. S17
Count of known and putative peptidases: 58, non-peptidase homologues 9
Completely sequences genomes from subspecies and strains				Protein coding genes
	To show all strains with completely sequenced genomes, click here.

Clan	Family	MEROPS ID	Peptidase or homologue (subtype)	MERNUM	Gene	Locus
AA	A32	unassigned	family A32 unassigned peptidases	MER0235545		SUS17_323
AA	A32	unassigned	family A32 unassigned peptidases	MER0233597		SUS17_388
AC	A8	unassigned	family A8 unassigned peptidases	MER0280769	lspA	SUS17_525
AC	A8	unassigned	family A8 unassigned peptidases	MER0401290	lspA	SUS17_3221
AD	A24	unassigned	subfamily A24A unassigned peptidases	MER0332994		SUS17_1948
AD	A24	unassigned	subfamily A24B unassigned peptidases	MER0427218
CL	C82	unassigned	subfamily C82A unassigned peptidases	MER0277330		SUS17_695
CL	C82	unassigned	subfamily C82A unassigned peptidases	MER0321889
GC	G4	non-peptidase homologue	family G4 non-peptidase homologues	MER0297854
MA	M1	M01.005	alanyl aminopeptidase (bacterial-type)	MER0335334	pepN	SUS17_2396
MA	M1	M01.031	cold-active aminopeptidase (Colwellia psychrerythraea)-type peptidase	MER0335648		SUS17_2926
MA	M1	unassigned	family M1 unassigned peptidases	MER0279687		SUS17_80
MA	M1	unassigned	family M1 unassigned peptidases	MER0465149
MA	M2	unassigned	family M2 unassigned peptidases	MER0287043		SUS17_806
MA	M3	unassigned	subfamily M3A unassigned peptidases	MER0344940
MA	M3	unassigned	subfamily M3A unassigned peptidases	MER0341037
MA	M13	unassigned	family M13 unassigned peptidases	MER0338567		SUS17_253
MA	M13	unassigned	family M13 unassigned peptidases	MER0338756		SUS17_254
MA	M41	M41.001	FtsH peptidase	MER0279081	hflB	SUS17_2488
MA	M61	M61.001	glycyl aminopeptidase	MER0310196		SUS17_3385
MA	M61	unassigned	family M61 unassigned peptidases	MER0310323		SUS17_1092
MC	M14	non-peptidase homologue	subfamily M14D non-peptidase homologues	MER0309081		SUS17_691
MD	M15	unassigned	subfamily M15B unassigned peptidases	MER0469444
ME	M16	non-peptidase homologue	subfamily M16B non-peptidase homologues	MER0392434		SUS17_732
ME	M16	non-peptidase homologue	subfamily M16B non-peptidase homologues	MER0391820		SUS17_2983
ME	M16	unassigned	subfamily M16B unassigned peptidases	MER0392613		SUS17_1418
ME	M16	unassigned	subfamily M16B unassigned peptidases	MER0391819		SUS17_2983
ME	M16	unassigned	subfamily M16B unassigned peptidases	MER0390913		SUS17_3865
MF	M17	unassigned	family M17 unassigned peptidases	MER0340122	pepA	SUS17_285
MF	M17	unassigned	family M17 unassigned peptidases	MER0340660		SUS17_822
MG	M24	M24.001	methionyl aminopeptidase 1 (Escherichia-type)	MER0319123	map	SUS17_1301
MG	M24	M24.009	aminopeptidase P1	MER0482399
MG	M24	unassigned	subfamily M24A unassigned peptidases	MER0394175	map	SUS17_1704
MG	M24	unassigned	subfamily M24B unassigned peptidases	MER0482398
MG	M24	unassigned	subfamily M24B unassigned peptidases	MER0396236		SUS17_2991
MH	M20	unassigned	family M20 unassigned peptidases	MER0302845
MH	M28	non-peptidase homologue	subfamily M28E non-peptidase homologues	MER0207642		SUS17_2236
MH	M28	unassigned	subfamily M28A unassigned peptidases	MER0195090		SUS17_2517
MH	M28	unassigned	subfamily M28D unassigned peptidases	MER0214213		SUS17_241
MH	M28	unassigned	subfamily M28E unassigned peptidases	MER0194540		SUS17_2177
MH	M28	unassigned	family M28 unassigned peptidases	MER0322261		SUS17_663
MH	M28	unassigned	family M28 unassigned peptidases	MER0230955		SUS17_2397
MJ	M19	unassigned	family M19 unassigned peptidases	MER0290293		SUS17_2056
MO	M23	M23.009	Mername-AA292 peptidase	MER0389457		SUS17_1818
MO	M23	M23.009	Mername-AA292 peptidase	MER0387064		SUS17_2062
MO	M23	non-peptidase homologue	subfamily M23B non-peptidase homologues	MER0389867		SUS17_68
MO	M23	unassigned	subfamily M23B unassigned peptidases	MER0389193		SUS17_739
MO	M23	unassigned	subfamily M23B unassigned peptidases	MER0478939
MO	M23	unassigned	subfamily M23B unassigned peptidases	MER0387196		SUS17_2297
MO	M23	unassigned	subfamily M23B unassigned peptidases	MER0388271		SUS17_3168
MU	M103	M103.UNW	family M103 non-peptidase homologues	MER0245452		SUS17_2512
NB	N6	N06.A01	FlhB protein (Escherichia coli)	MER0405489	flhB
PA	S1	unassigned	subfamily S1C unassigned peptidases	MER0407301
PA	S1	unassigned	subfamily S1E unassigned peptidases	MER0408166
PB	C44	C44.001	amidophosphoribosyltransferase precursor	MER0456611	purF
PB	C44	C44.003	glutamate synthase (NADPH) large chain	MER0459764
PB	C44	non-peptidase homologue	family C44 non-peptidase homologues	MER0456610	glmS
PB	C44	unassigned	family C44 unassigned peptidases	MER0459763	asnB
PB	T3	T03.001	gamma-glutamyltransferase 1 (bacterial-type)	MER0379114	ggt	SUS17_481
PB	T3	unassigned	family T3 unassigned peptidases	MER0380200		SUS17_11
PC	C26	C26.955	aminodeoxychorismate synthase, subunit II	MER0438518
PC	C26	C26.964	CTP synthetase	MER0451577	pyrG
PC	C26	C26.A07	At1g63660 (Arabidopsis thaliana)	MER0443296	guaA
PC	C26	unassigned	family C26 unassigned peptidases	MER0442654	carA
PC	C26	unassigned	family C26 unassigned peptidases	MER0449113
PC	C26	unassigned	family C26 unassigned peptidases	MER0447102	hisH
PE	T5	T05.001	ornithine acetyltransferase precursor	MER0307557	argJ	SUS17_791
SC	S9	S09.009	dipeptidyl-peptidase 4 (bacteria-type 1)	MER0490539
SC	S9	S09.010	oligopeptidase B	MER0490541
SC	S9	S09.013	dipeptidyl-peptidase 4 (bacteria-type 2)	MER0490540
SC	S9	S09.A77	dpf-6 g.p. (Caenorhabditis elegans)	MER0329032		SUS17_702
SC	S9	S09.A77	dpf-6 g.p. (Caenorhabditis elegans)	MER0326485		SUS17_2352
SC	S9	unassigned	subfamily S9A unassigned peptidases	MER0326036
SC	S9	unassigned	family S9 unassigned peptidases	MER0478951		SUS17_1019
SC	S10	unassigned	family S10 unassigned peptidases	MER0490538
SC	S10	unassigned	family S10 unassigned peptidases	MER0490542
SC	S33	unassigned	family S33 unassigned peptidases	MER0381423		SUS17_2449
SE	S11	unassigned	family S11 unassigned peptidases	MER0351000		SUS17_1143
SE	S12	non-peptidase homologue	family S12 non-peptidase homologues	MER0354493		SUS17_2419
SE	S12	unassigned	family S12 unassigned peptidases	MER0353761		SUS17_46
SE	S12	unassigned	family S12 unassigned peptidases	MER0298006
SE	S12	unassigned	family S12 unassigned peptidases	MER0355284		SUS17_1593
SF	S24	S24.001	repressor LexA	MER0375682	lexA	SUS17_832
SF	S26	S26.001	signal peptidase I	MER0333318	lepB	SUS17_2935
SF	S26	S26.014	TraF peptidase	MER0269984		SUS17_2805
SH	S78	unassigned	family S78 unassigned peptidases	MER0323017
SJ	S16	S16.001	Lon-A peptidase	MER0299874
SJ	S16	S16.A04	DNA repair protein RadA (Escherichia coli)	MER0475392
SK	S14	S14.001	peptidase Clp (type 1)	MER0358179	clpP	SUS17_1881
SK	S41	S41.004	C-terminal processing peptidase-3	MER0337255		SUS17_2574
SK	S49	unassigned	subfamily S49B unassigned peptidases	MER0321423		SUS17_2101
SK	S49	unassigned	subfamily S49B unassigned peptidases	MER0276089	sppA	SUS17_2476
SS	S66	unassigned	family S66 unassigned peptidases	MER0399189

GENOME ANALYSIS: Comparison with 18 completely sequenced genomes from genus Sphingomonas
Family	Comment
A32	significant presence (2 homologues)
M1	lineage specific expansion (4 homologues)
M103	significant decrease in homologues (1 homologues)
M15	significant presence (1 homologues)
M19	significant decrease in homologues (1 homologues)
M20	significant decrease in homologues (1 homologues)
M28	significant decrease in homologues (6 homologues)
N6	significant presence (1 homologues)
S9	significant decrease in homologues (7 homologues)
S26	significant decrease in homologues (2 homologues)
S33	significant decrease in homologues (1 homologues)
S66	significant presence (1 homologues)
S78	significant presence (1 homologues)
T3	significant decrease in homologues (2 homologues)