Clostridium sp. D5

Taxonomy
Taxonomy database identifier: 556261
Superkingdom Bacteria
Phylum Firmicutes
Class Clostridia
Order Clostridiales
Family Clostridiaceae
Genus Clostridium
Species sp. D5
Peptidase View peptidase sequences from Clostridium sp. D5
Count of known and putative peptidases: 48, non-peptidase homologues 2
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0426690 HMPREF0240_00855
AC A8 unassigned family A8 unassigned peptidases MER0401577 lspA HMPREF0240_02922
AD A24 A24.019 ComC peptidase MER0333098 HMPREF0240_01305
AD A24 unassigned family A24 unassigned peptidases MER0427203
CA C1 unassigned subfamily C1A unassigned peptidases MER0428650
CA C39 C39.005 colicin V processing peptidase MER0369033 HMPREF0240_03076
CF C15 C15.001 pyroglutamyl-peptidase I (prokaryote) MER0292459 pcp HMPREF0240_03513
CL C60 C60.002 sortase B MER0300044
CL C60 C60.002 sortase B MER0188670
CL C82 C82.001 L,D-transpeptidase (Enterococcus-type) MER0321790
CL C82 C82.001 L,D-transpeptidase (Enterococcus-type) MER0321766
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0453167
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0376904 HMPREF0240_01866
CO C40 unassigned family C40 unassigned peptidases MER0454064
CO C40 unassigned family C40 unassigned peptidases MER0378145 HMPREF0240_03139
CO C40 unassigned family C40 unassigned peptidases MER0377873 HMPREF0240_03266
CR C108 C108.001 Prp peptidase (Staphylococcus aureus) MER0150192
G- G5 unassigned family G5 unassigned peptidases MER0911513 HMPREF0240_01853
G- G5 unassigned family G5 unassigned peptidases MER0935998 HMPREF0240_02817
G- G5 unassigned family G5 unassigned peptidases MER0939522 HMPREF0240_04167
MA M41 unassigned family M41 unassigned peptidases MER0363251 ftsH HMPREF0240_03341
MA M41 unassigned family M41 unassigned peptidases MER0363577 ftsH HMPREF0240_03726
MA M56 unassigned family M56 unassigned peptidases MER0306426 HMPREF0240_00065
MD M15 unassigned subfamily M15B unassigned peptidases MER0277466 HMPREF0240_03587
ME M16 unassigned subfamily M16C unassigned peptidases MER0316499 HMPREF0240_00956
MG M24 non-peptidase homologue subfamily M24B non-peptidase homologues MER0483901
MG M24 unassigned subfamily M24A unassigned peptidases MER0394855 map HMPREF0240_03906
MG M24 unassigned subfamily M24B unassigned peptidases MER0396275 HMPREF0240_00293
MG M24 unassigned subfamily M24B unassigned peptidases MER0482357
MH M18 unassigned family M18 unassigned peptidases MER0341101 HMPREF0240_00961
MH M18 unassigned family M18 unassigned peptidases MER0341074 HMPREF0240_00962
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0474520
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0474521
MH M20 unassigned subfamily M20A unassigned peptidases MER0369268 HMPREF0240_00196
MH M20 unassigned subfamily M20A unassigned peptidases MER0370150 HMPREF0240_01407
MH M20 unassigned subfamily M20B unassigned peptidases MER0370635 HMPREF0240_00863
MH M20 unassigned subfamily M20C unassigned peptidases MER0371177 HMPREF0240_00527
MH M20 unassigned subfamily M20C unassigned peptidases MER0303766
MH M20 unassigned family M20 unassigned peptidases MER0794352 HMPREF0240_01418
MH M20 unassigned family M20 unassigned peptidases MER0475083
MH M42 unassigned family M42 unassigned peptidases MER0364376 HMPREF0240_01908
MJ M19 unassigned family M19 unassigned peptidases MER0341554 HMPREF0240_01582
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0867050 HMPREF0240_01040
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0865199 HMPREF0240_00289
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0869075 ade
MJ M38 unassigned family M38 unassigned peptidases MER0866744 HMPREF0240_04211
MM M50 unassigned subfamily M50A unassigned peptidases MER0891877 HMPREF0240_01926
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0479619
MO M23 unassigned subfamily M23B unassigned peptidases MER0388827 HMPREF0240_00835
MO M23 unassigned subfamily M23B unassigned peptidases MER0387429 HMPREF0240_03718
MQ M29 non-peptidase homologue family M29 non-peptidase homologues MER0856822 HMPREF0240_00780
MQ M29 non-peptidase homologue family M29 non-peptidase homologues MER0857297 HMPREF0240_02512
PA S1 unassigned subfamily S1B unassigned peptidases MER0408204
PA S55 S55.001 SpoIVB peptidase MER0316212 HMPREF0240_04425
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0305671 HMPREF0240_04348
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0459698
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0456554
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0459700
PB C44 unassigned family C44 unassigned peptidases MER0459699
PC C26 C26.959 TRP3 protein MER0436414
PC C26 C26.964 CTP synthetase MER0451047
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0443737
PC C26 C26.A07 At1g63660 (Arabidopsis thaliana) MER0441976
PC C26 unassigned family C26 unassigned peptidases MER0450477
PC C26 unassigned family C26 unassigned peptidases MER0440243
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0385182 HMPREF0240_03763
PE T5 T05.002 ArgJ protein (archea) MER0307568 argJ HMPREF0240_01615
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0970345 HMPREF0240_00853
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0973652 HMPREF0240_02155
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0984837 HMPREF0240_03187
SB S8 unassigned subfamily S8A unassigned peptidases MER0989430 HMPREF0240_00570
SB S8 unassigned subfamily S8A unassigned peptidases MER0968828 HMPREF0240_01589
SB S8 unassigned subfamily S8A unassigned peptidases MER0980582 HMPREF0240_01992
SB S8 unassigned subfamily S8A unassigned peptidases MER0978518 HMPREF0240_02300
SB S8 unassigned subfamily S8B unassigned peptidases MER1291118
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1021853 HMPREF0240_00369
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1023373 HMPREF0240_00372
SC S33 unassigned family S33 unassigned peptidases MER0381043 HMPREF0240_01946
SE S11 S11.004 K15-type DD-transpeptidase MER0352631 HMPREF0240_02916
SE S11 S11.004 K15-type DD-transpeptidase MER0351838 HMPREF0240_04512
SE S11 S11.005 D-Ala-D-Ala carboxypeptidase DacF MER0350939 HMPREF0240_04507
SE S11 S11.010 penicillin-binding protein 4 (Staphylococcus-type) peptidase MER0351143 HMPREF0240_02833
SE S11 unassigned family S11 unassigned peptidases MER0352661 HMPREF0240_04491
SE S12 non-peptidase homologue family S12 non-peptidase homologues MER1028431 HMPREF0240_01403
SE S12 unassigned family S12 unassigned peptidases MER0354584 HMPREF0240_01728
SF S24 S24.001 repressor LexA MER0275289 lexA HMPREF0240_02951
SF S26 unassigned subfamily S26A unassigned peptidases MER0246829 HMPREF0240_01256
SF S26 unassigned subfamily S26A unassigned peptidases MER0246791 HMPREF0240_01258
SF S26 unassigned subfamily S26A unassigned peptidases MER0246518 HMPREF0240_01600
SF S26 unassigned subfamily S26A unassigned peptidases MER0246515 HMPREF0240_03371
SF S26 unassigned subfamily S26B unassigned peptidases MER1052733 HMPREF0240_01978
SJ S16 S16.001 Lon-A peptidase MER0360491 lon HMPREF0240_03767
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER1030551 HMPREF0240_01828
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER1038273 HMPREF0240_02686
SK S14 S14.001 peptidase Clp (type 1) MER0358127 clpP HMPREF0240_03765
SK S14 unassigned family S14 unassigned peptidases MER1011903 HMPREF0240_02865
SK S41 S41.004 C-terminal processing peptidase-3 MER0288661 HMPREF0240_00836
SK S49 S49.A08 BSn5_05605 g.p. (Bacillus subtilis) MER0321479 HMPREF0240_01458
ST S54 unassigned family S54 unassigned peptidases MER1076283 HMPREF0240_03287
U- U32 unassigned family U32 unassigned peptidases MER0403621
U- U32 unassigned family U32 unassigned peptidases MER0325671

GENOME ANALYSIS: Comparison with 96 completely sequenced genomes from genus Clostridium
Family Comment
C108 significant presence (1 homologues)