Polymorphum gilvum

Taxonomy
Taxonomy database identifier: 991904
Superkingdom Bacteria
Phylum Proteobacteria
Class Alphaproteobacteria
Species gilvum
Genus Polymorphum
Peptidase View peptidase sequences from Polymorphum gilvum
Count of known and putative peptidases: 82, non-peptidase homologues 30
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AA A32 unassigned family A32 unassigned peptidases MER0241658 SL003B_2831
AA A32 unassigned family A32 unassigned peptidases MER0241722 SL003B_3677
AC A8 unassigned family A8 unassigned peptidases MER0243420 lspA SL003B_3446
AD A24 unassigned subfamily A24B unassigned peptidases MER0426989 SL003B_3665
CA C93 unassigned family C93 unassigned peptidases MER0391511 SL003B_1634
CD C14 unassigned subfamily C14B unassigned peptidases MER0243394 SL003B_1974
CL C82 C82.003 ykuD transpeptidase MER0461564 SL003B_0455
CL C82 C82.003 ykuD transpeptidase MER0463215 SL003B_0804
CL C82 C82.003 ykuD transpeptidase MER0461565 SL003B_1598
CL C82 C82.003 ykuD transpeptidase MER0463216 SL003B_1620
CL C82 C82.003 ykuD transpeptidase MER0461567 SL003B_2807
CL C82 C82.003 ykuD transpeptidase MER0463217 SL003B_3072
CL C82 C82.003 ykuD transpeptidase MER0461568 SL003B_3472
CL C82 unassigned subfamily C82A unassigned peptidases MER0461563 SL003B_0329
CL C82 unassigned subfamily C82A unassigned peptidases MER0243871 SL003B_0335
CL C82 unassigned subfamily C82A unassigned peptidases MER0461566 SL003B_2624
CL C82 unassigned subfamily C82A unassigned peptidases MER0243309 SL003B_3329
CO C40 C40.001 dipeptidyl-peptidase VI (bacteria) MER0242797 SL003B_3654
CO C40 unassigned family C40 unassigned peptidases MER0718794 SL003B_4035
CO C40 unassigned family C40 unassigned peptidases MER0243247 SL003B_1701
CO C40 unassigned family C40 unassigned peptidases MER0453657 SL003B_2920
CO C40 unassigned family C40 unassigned peptidases MER0242788 SL003B_3790
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0242733 SL003B_2894
MA M3 unassigned subfamily M3A unassigned peptidases MER0242744 SL003B_1956
MA M3 unassigned subfamily M3B unassigned peptidases MER0243202 SL003B_0872
MA M10 unassigned subfamily M10A unassigned peptidases MER0243024 SL003B_1401
MA M10 unassigned subfamily M10B unassigned peptidases MER0243434 SL003B_0245
MA M41 M41.001 FtsH peptidase MER0243317 ftsH SL003B_0928
MA M41 unassigned family M41 unassigned peptidases MER0243187 ftsH SL003B_0653
MA M41 unassigned family M41 unassigned peptidases MER0243415 ftsH SL003B_3516
MA M48 unassigned subfamily M48B unassigned peptidases MER0243373 htpX SL003B_0145
MA M48 unassigned subfamily M48B unassigned peptidases MER0243161 SL003B_0646
MA M48 unassigned subfamily M48B unassigned peptidases MER0242857 SL003B_3741
MA M48 unassigned subfamily M48C unassigned peptidases MER0242859 SL003B_0394
MA M48 unassigned family M48 unassigned peptidases MER0888292 SL003B_2047
MA M61 non-peptidase homologue family M61 non-peptidase homologues MER0904173 SL003B_4155
MD M15 non-peptidase homologue family M15 non-peptidase homologues MER0243353 SL003B_0869
MD M15 unassigned subfamily M15A unassigned peptidases MER0243060 SL003B_4031
MD M74 unassigned family M74 unassigned peptidases MER1263033
MD M74 unassigned family M74 unassigned peptidases MER0242816 mepA SL003B_3727
ME M16 M16.019 YMXG peptidase MER0243421 SL003B_3448
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0243423 SL003B_3449
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0243422 SL003B_3449
ME M16 unassigned subfamily M16B unassigned peptidases MER0243287 SL003B_3387
MF M17 unassigned family M17 unassigned peptidases MER0243151 pepA SL003B_2392
MF M17 unassigned family M17 unassigned peptidases MER0242819 SL003B_3656
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0243227 map SL003B_1617
MG M24 M24.009 aminopeptidase P1 MER0243123 SL003B_1362
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0243398 SL003B_1034
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0483384 pepQ SL003B_1193
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0243399 SL003B_2641
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0243424 SL003B_2647
MH M20 non-peptidase homologue subfamily M20A non-peptidase homologues MER0242998 SL003B_2258
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0243064 SL003B_2291
MH M20 unassigned subfamily M20A unassigned peptidases MER0243426 argE SL003B_2648
MH M20 unassigned subfamily M20A unassigned peptidases MER0242696 SL003B_2881
MH M20 unassigned subfamily M20A unassigned peptidases MER0242790 dapE SL003B_3646
MH M20 unassigned family M20D unassigned peptidases MER0242978 SL003B_0368
MH M20 unassigned family M20D unassigned peptidases MER0242856 celE SL003B_2134
MH M20 unassigned subfamily M20F unassigned peptidases MER0242789 SL003B_2987
MH M20 unassigned family M20 unassigned peptidases MER0242996 SL003B_2257
MH M42 unassigned family M42 unassigned peptidases MER0879278 SL003B_2636
MH M42 unassigned family M42 unassigned peptidases MER0242818 SL003B_3729
MJ M19 unassigned family M19 unassigned peptidases MER0243030 SL003B_3071
MJ M38 M38.973 dihydropyrimidinase MER0243083 hydA SL003B_2293
MJ M38 M38.982 urease MER0243276 ureC SL003B_0103
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0868075 SL003B_2456
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0243430 pyrC SL003B_1849
MM M50 unassigned subfamily M50B unassigned peptidases MER0896772 SL003B_2100
MO M23 M23.009 Mername-AA292 peptidase MER0242823 SL003B_2053
MO M23 M23.951 DipM g.p. (Caulobacter sp.) MER0242825 SL003B_2201
MO M23 non-peptidase homologue family M23 non-peptidase homologues MER0243203 SL003B_4154
MO M23 unassigned subfamily M23B unassigned peptidases MER0242900 SL003B_0481
MS M75 M75.001 imelysin MER0242883 SL003B_0406
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0243311 SL003B_3403
MU M103 M103.950 microcin-processing peptidase 1 homologue MER0243338 pmbA SL003B_3413
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0243232 SL003B_1551
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0242991 flhB SL003B_3858
PA S1 unassigned subfamily S1C unassigned peptidases MER0242742 dop SL003B_2902
PA S1 unassigned subfamily S1C unassigned peptidases MER0243162 degP SL003B_0647
PA S1 unassigned subfamily S1C unassigned peptidases MER0242988 SL003B_1383
PA S1 unassigned subfamily S1C unassigned peptidases MER0243400 SL003B_1766
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0243224 SL003B_2414
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0243293 gltB SL003B_0848
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0243182 glmS SL003B_2328
PB C44 unassigned family C44 unassigned peptidases MER0458296 SL003B_2638
PB T1 T01.006 HslV component of HslUV peptidase MER0243417 hslV SL003B_4322
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0243340 SL003B_0199
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0243225 SL003B_0811
PC C26 C26.957 GMP synthase MER0243246 guaA SL003B_2430
PC C26 C26.959 TRP3 protein MER0243344 trpE SL003B_2542
PC C26 C26.964 CTP synthetase MER0451251 pyrG SL003B_2188
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0446596 hisH SL003B_0010
PC C26 unassigned family C26 unassigned peptidases MER0242882 guaA2 SL003B_0404
PC C26 unassigned family C26 unassigned peptidases MER0243230 SL003B_0820
PC C26 unassigned family C26 unassigned peptidases MER0242864 carA SL003B_1263
PC C26 unassigned family C26 unassigned peptidases MER0243269 SL003B_3309
PC C26 unassigned family C26 unassigned peptidases MER0243358 SL003B_3485
PE P1 P01.001 DmpA aminopeptidase MER0242927 SL003B_3107
PE P1 P01.101 pantetheinyl hydrolase ThnT precursor MER0243179 SL003B_1595
PE T5 T05.001 ornithine acetyltransferase precursor MER0243046 argJ SL003B_0461
SB S8 unassigned subfamily S8A unassigned peptidases MER0243214 SL003B_0668
SC S9 S09.010 oligopeptidase B MER0242941 SL003B_2969
SC S9 S09.A39 YeiG protein (Escherichi coli) MER0243364 SL003B_1015
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0243330 SL003B_1872
SC S9 unassigned subfamily S9C unassigned peptidases MER0478640 SL003B_2365
SC S9 unassigned family S9 unassigned peptidases MER0243315 SL003B_0192
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1021479 SL003B_2365
SC S33 unassigned family S33 unassigned peptidases MER0243029 SL003B_0453
SC S33 unassigned family S33 unassigned peptidases MER0242878 SL003B_0471
SC S33 unassigned family S33 unassigned peptidases MER0243418 SL003B_2714
SE S11 non-peptidase homologue family S11 non-peptidase homologues MER0243041 dac SL003B_2279
SE S11 unassigned family S11 unassigned peptidases MER0243290 SL003B_0108
SE S11 unassigned family S11 unassigned peptidases MER0243022 SL003B_1396
SE S11 unassigned family S11 unassigned peptidases MER0243385 SL003B_1824
SE S12 unassigned family S12 unassigned peptidases MER0243045 SL003B_0535
SF S24 S24.001 repressor LexA MER0242779 lexA SL003B_2110
SF S24 non-peptidase homologue family S24 non-peptidase homologues MER0243159 SL003B_3261
SF S26 S26.001 signal peptidase I MER0243383 SL003B_1895
SF S26 S26.014 TraF peptidase MER0242780 SL003B_0294
SF S26 unassigned subfamily S26A unassigned peptidases MER1335441
SH S78 S78.001 prohead peptidase (bacteriophage HK97) MER0242824 SL003B_2930
SJ S16 S16.001 Lon-A peptidase MER0242862 lon SL003B_2065
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0243204 radA SL003B_2412
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0243278 SL003B_0033
SJ S16 unassigned family S16 unassigned peptidases MER0243367 SL003B_2622
SK S14 S14.001 peptidase Clp (type 1) MER0242858 clpP SL003B_2063
SK S14 unassigned family S14 unassigned peptidases MER0243343 clpP3 SL003B_1811
SK S41 S41.004 C-terminal processing peptidase-3 MER0243205 SL003B_4155
SK S49 S49.003 protein C (bacteriophage lambda) MER0243113 SL003B_4047
SK S49 non-peptidase homologue subfamily S49C non-peptidase homologues MER1072906 SL003B_0658
SK S49 unassigned subfamily S49B unassigned peptidases MER1069095 SL003B_3345
SK S49 unassigned subfamily S49B unassigned peptidases MER1070963 SL003B_4190
ST S54 S54.027 RhoII peptidase (Haloferax volcanii) and similar MER0243294 SL003B_0115
ST S54 S54.027 RhoII peptidase (Haloferax volcanii) and similar MER0243192 SL003B_0657
ST S54 unassigned family S54 unassigned peptidases MER1081172 SL003B_1637
U- U32 U32.A01 YhbV protein (Escherichia coli) MER0243092 SL003B_0554
U- U32 unassigned family U32 unassigned peptidases MER0243093 SL003B_0555
U- U69 unassigned family U69 unassigned peptidases MER0277441

GENOME ANALYSIS: Comparison with 571 completely sequenced genomes from class Alphaproteobacteria
Family Comment
C14 significant presence (1 homologues)
C93 significant presence (1 homologues)
M10 significant presence (2 homologues)
M42 significant presence (2 homologues)
M61 significant presence (1 homologues)
M75 significant presence (1 homologues)
U32 significant presence (2 homologues)
U69 significant presence (1 homologues)