Pyramidobacter piscolens

Taxonomy
Taxonomy database identifier: 638849
Superkingdom Bacteria
Phylum Synergistetes
Class Synergistia
Order Synergistales
Family Synergistaceae
Genus Pyramidobacter
Species piscolens
Peptidase View peptidase sequences from Pyramidobacter piscolens
Count of known and putative peptidases: 47, non-peptidase homologues 24
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AD A24 unassigned family A24 unassigned peptidases MER0427150
AE A31 A31.003 HycI peptidase MER0427696
CA C1 C01.086 aminopeptidase C MER0233587 HMPREF7215_1749
CA C110 C110.UPW family C110 unassigned peptidases MER0627108
CA C110 C110.UPW family C110 unassigned peptidases MER0627102
CF C15 C15.001 pyroglutamyl-peptidase I (prokaryote) MER0292469 pcp HMPREF7215_1887
CL C82 unassigned subfamily C82A unassigned peptidases MER0462288
MA M3 unassigned subfamily M3B unassigned peptidases MER0233014 pepF HMPREF7215_0826
MA M41 M41.021 FtsH peptidase (Thermotoga-type) MER0362313 ftsH HMPREF7215_0122
MA M41 unassigned family M41 unassigned peptidases MER0363296 ftsH HMPREF7215_0724
MD M15 unassigned subfamily M15A unassigned peptidases MER0280167 HMPREF7215_1805
MD M15 unassigned subfamily M15D unassigned peptidases MER0312451 ddpX HMPREF7215_2042
MG M24 unassigned subfamily M24A unassigned peptidases MER0394658 map HMPREF7215_0896
MG M24 unassigned subfamily M24B unassigned peptidases MER0482151
MG M24 unassigned subfamily M24B unassigned peptidases MER0482152
MH M18 unassigned family M18 unassigned peptidases MER0234089 HMPREF7215_2401
MH M18 unassigned family M18 unassigned peptidases MER0289990 HMPREF7215_0269
MH M20 M20.020 p-aminobenzoyl-glutamate hydrolase subunit A MER0374157 abgA HMPREF7215_0445
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0844531 HMPREF7215_1063
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0374819 HMPREF7215_1141
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0374841 HMPREF7215_1293
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0932287 HMPREF7215_1646
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0374736 HMPREF7215_0239
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0374561 HMPREF7215_0506
MH M20 unassigned subfamily M20A unassigned peptidases MER0369468 HMPREF7215_1440
MH M20 unassigned subfamily M20A unassigned peptidases MER0302786
MH M20 unassigned subfamily M20A unassigned peptidases MER0473894
MH M20 unassigned subfamily M20A unassigned peptidases MER0369982 HMPREF7215_1118
MH M20 unassigned subfamily M20A unassigned peptidases MER0370016 HMPREF7215_1120
MH M20 unassigned subfamily M20B unassigned peptidases MER0276336 HMPREF7215_0763
MH M20 unassigned subfamily M20B unassigned peptidases MER0370610 pepT HMPREF7215_0814
MH M20 unassigned subfamily M20B unassigned peptidases MER0369768 HMPREF7215_1115
MH M20 unassigned family M20D unassigned peptidases MER0304018
MH M20 unassigned family M20D unassigned peptidases MER0372545 HMPREF7215_0444
MH M20 unassigned family M20D unassigned peptidases MER0303940
MH M20 unassigned family M20D unassigned peptidases MER0371989 HMPREF7215_0462
MH M20 unassigned family M20D unassigned peptidases MER0374568 HMPREF7215_1641
MH M20 unassigned family M20D unassigned peptidases MER0372141 HMPREF7215_0709
MH M20 unassigned family M20D unassigned peptidases MER0372675 HMPREF7215_1877
MH M20 unassigned family M20D unassigned peptidases MER0372316 HMPREF7215_1191
MH M20 unassigned family M20D unassigned peptidases MER0373744 HMPREF7215_1192
MH M20 unassigned family M20D unassigned peptidases MER0371631 HMPREF7215_1036
MH M20 unassigned family M20D unassigned peptidases MER0372670 HMPREF7215_1733
MH M20 unassigned family M20D unassigned peptidases MER0474672
MH M20 unassigned subfamily M20F unassigned peptidases MER0808759 HMPREF7215_1091
MH M20 unassigned family M20 unassigned peptidases MER0473772 HMPREF7215_1127
MH M20 unassigned family M20 unassigned peptidases MER0374802 HMPREF7215_2289
MH M20 unassigned family M20 unassigned peptidases MER0474579
MJ M19 unassigned family M19 unassigned peptidases MER0290482 HMPREF7215_1981
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0872852 HMPREF7215_1076
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0865922 HMPREF7215_1633
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0861944 hutI
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0872519 hydA
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0863079 HMPREF7215_0961
MJ M38 unassigned family M38 unassigned peptidases MER0296573 iadA HMPREF7215_1164
MM M50 non-peptidase homologue subfamily M50B non-peptidase homologues MER0894464 HMPREF7215_0198
MM M50 unassigned family M50 unassigned peptidases MER0891596 rseP
MN M55 unassigned family M55 unassigned peptidases MER0229354 HMPREF7215_1707
MN M55 unassigned family M55 unassigned peptidases MER0306107 HMPREF7215_2468
MO M23 M23.009 Mername-AA292 peptidase MER0387940 HMPREF7215_0014
MO M23 M23.014 ShyA D,D-endopeptidase (Vibrio cholerae) MER0314518 HMPREF7215_2362
MO M23 unassigned subfamily M23B unassigned peptidases MER0277391 HMPREF7215_0027
MU M103 M103.UNW family M103 non-peptidase homologues MER0328963 HMPREF7215_0182
MU M103 M103.UPW family M103 unassigned peptidases MER0331812 HMPREF7215_0540
PA S1 unassigned subfamily S1C unassigned peptidases MER0217464
PA S1 unassigned subfamily S1C unassigned peptidases MER0406493
PA S55 non-peptidase homologue hypothetical protein Acid345_3562 MER0316271 HMPREF7215_1050
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0456248 glmS
PB C45 unassigned family C45 unassigned peptidases MER0279173 HMPREF7215_1098
PB C69 unassigned family C69 unassigned peptidases MER0736070 HMPREF7215_1152
PB C69 unassigned family C69 unassigned peptidases MER0237361 HMPREF7215_2403
PB C69 unassigned family C69 unassigned peptidases MER0237483 HMPREF7215_2409
PB C69 unassigned family C69 unassigned peptidases MER0236913 HMPREF7215_1461
PB C69 unassigned family C69 unassigned peptidases MER0386725 HMPREF7215_2408
PB C69 unassigned family C69 unassigned peptidases MER0313845 HMPREF7215_2414
PB C69 unassigned family C69 unassigned peptidases MER0386789 HMPREF7215_2446
PB T1 unassigned subfamily T1B unassigned peptidases MER0275485 hslV HMPREF7215_0380
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0229714 ggt HMPREF7215_0820
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0380199 HMPREF7215_1631
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0379527 HMPREF7215_0093
PB T3 unassigned family T3 unassigned peptidases MER0379252 HMPREF7215_2101
PC C26 C26.A07 At1g63660 (Arabidopsis thaliana) MER0442335
PC C26 unassigned family C26 unassigned peptidases MER0440048 carA
PC C26 unassigned family C26 unassigned peptidases MER0447667
PC C26 unassigned family C26 unassigned peptidases MER0446465 hisH
PE P1 unassigned family P01 unassigned peptidases MER0316925 HMPREF7215_1640
SC S9 S09.071 trilobed protease MER0404980
SC S9 S09.071 trilobed protease MER0329131 HMPREF7215_0216
SC S9 S09.A77 dpf-6 g.p. (Caenorhabditis elegans) MER0239125 HMPREF7215_2679
SE S12 unassigned family S12 unassigned peptidases MER0354885 HMPREF7215_1367
SF S26 S26.025 signal peptidase sipX MER0246536 lepB HMPREF7215_0392
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0475489
SJ S16 unassigned family S16 unassigned peptidases MER0361821 HMPREF7215_0309
SJ S16 unassigned family S16 unassigned peptidases MER0361254 lon HMPREF7215_0569
SK S14 S14.001 peptidase Clp (type 1) MER0358203 clpP HMPREF7215_0571
SK S41 S41.004 C-terminal processing peptidase-3 MER0338210 HMPREF7215_0028
U- U32 unassigned family U32 unassigned peptidases MER0325641

GENOME ANALYSIS: Comparison with 11 completely sequenced genomes from family Synergistaceae
Family Comment
C1 significant presence (1 homologues)
C110 significant presence (2 homologues)
C44 significant decrease in homologues (1 homologues)
M17 significant absence (0 homologues)
M20 lineage specific expansion (31 homologues)
M48 significant absence (0 homologues)
T3 lineage specific expansion (4 homologues)
U32 significant presence (1 homologues)