Verrucomicrobium spinosum

Taxonomy
Taxonomy database identifier: 2736
Superkingdom Bacteria
Phylum Verrucomicrobia
Class Verrucomicrobiae
Order Verrucomicrobiales
Family Verrucomicrobiaceae
Genus Verrucomicrobium
Species spinosum
Peptidase View peptidase sequences from Verrucomicrobium spinosum
Count of known and putative peptidases: 64, non-peptidase homologues 19
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0401383
AD A24 non-peptidase homologue subfamily A24A non-peptidase homologues MER0180793
AD A24 unassigned subfamily A24A unassigned peptidases MER0184788
CL C82 C82.003 ykuD transpeptidase MER0462030 VspiD_30475
CL C82 C82.A01 LdtF protein (Escherichia coli) MER0243960 VspiD_07990
CL C82 unassigned subfamily C82A unassigned peptidases MER0463535
CL C82 unassigned subfamily C82A unassigned peptidases MER0462026 VspiD_05985
CL C82 unassigned subfamily C82A unassigned peptidases MER0171795 VspiD_09565
CL C82 unassigned subfamily C82A unassigned peptidases MER0172193 VspiD_13210
CL C82 unassigned subfamily C82A unassigned peptidases MER0463536 VspiD_17515
CL C82 unassigned subfamily C82A unassigned peptidases MER0462027 VspiD_18770
CL C82 unassigned subfamily C82A unassigned peptidases MER0462028 VspiD_18885
CL C82 unassigned subfamily C82A unassigned peptidases MER0166464 VspiD_20955
CL C82 unassigned subfamily C82A unassigned peptidases MER0463537 VspiD_24025
CL C82 unassigned subfamily C82A unassigned peptidases MER0166871
CL C82 unassigned subfamily C82A unassigned peptidases MER0462029 VspiD_25435
CL C82 unassigned subfamily C82A unassigned peptidases MER0167127 VspiD_30425
CL C82 unassigned subfamily C82A unassigned peptidases MER0462031
MA M1 unassigned family M1 unassigned peptidases MER0165580
MA M3 unassigned subfamily M3A unassigned peptidases MER0180248
MA M32 unassigned family M32 unassigned peptidases MER0180208
MA M41 unassigned family M41 unassigned peptidases MER0166619
MA M48 unassigned subfamily M48A unassigned peptidases MER0190839
MA M56 unassigned family M56 unassigned peptidases MER0306395
MA M98 unassigned family M98 unassigned peptidases MER0262835
MC M14 non-peptidase homologue subfamily M14D non-peptidase homologues MER0382912
MD M15 unassigned subfamily M15C unassigned peptidases MER0180488 VspiD_08955
MD M15 unassigned subfamily M15D unassigned peptidases MER0180697
MD M15 unassigned subfamily M15D unassigned peptidases MER0180754
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0166929
ME M16 unassigned subfamily M16B unassigned peptidases MER0166666
ME M16 unassigned subfamily M16B unassigned peptidases MER0166928
MG M24 unassigned subfamily M24A unassigned peptidases MER0166561
MG M24 unassigned subfamily M24B unassigned peptidases MER0180976
MG M24 unassigned subfamily M24B unassigned peptidases MER0167173
MH M20 unassigned family M20 unassigned peptidases MER0369204
MH M20 unassigned family M20 unassigned peptidases MER0180383 VspiD_03490
MH M20 unassigned family M20 unassigned peptidases MER0172081
MH M28 unassigned subfamily M28B unassigned peptidases MER0190161
MH M42 unassigned family M42 unassigned peptidases MER0180560
MJ M19 non-peptidase homologue family M19 non-peptidase homologues MER0180948 VspiD_25355
MJ M19 unassigned family M19 unassigned peptidases MER0180285
MM M50 unassigned subfamily M50B unassigned peptidases MER0180323 VspiD_03295
MM M50 unassigned subfamily M50B unassigned peptidases MER0180723 VspiD_17595
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0479731
MO M23 non-peptidase homologue family M23 non-peptidase homologues MER0479528
MO M23 unassigned subfamily M23B unassigned peptidases MER0479798 VspiD_08035
MQ M29 unassigned family M29 unassigned peptidases MER0346190
MT M81 unassigned family M81 unassigned peptidases MER0223300
NB N6 N06.001 YscU protein MER0326812
PA S1 S01.279 Deg2 chloroplast peptidase MER0406165
PA S1 S01.453 MucD peptidase MER0407434
PA S1 S01.477 AlgW peptidase MER0327767
PA S1 unassigned subfamily S1C unassigned peptidases MER0244209
PA S1 unassigned subfamily S1C unassigned peptidases MER0211430
PA S1 unassigned subfamily S1C unassigned peptidases MER0217220 VspiD_20505
PA S1 unassigned subfamily S1C unassigned peptidases MER0206069
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0180846
PB C44 unassigned family C44 unassigned peptidases MER0458935
PB C44 unassigned family C44 unassigned peptidases MER0458936
PB C44 unassigned family C44 unassigned peptidases MER0458937
PB C44 unassigned family C44 unassigned peptidases MER0458938
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0307247 VspiD_32320
PC C26 C26.957 GMP synthase MER0443868 guaA
PC C26 C26.959 TRP3 protein MER0436070
PC C26 C26.964 CTP synthetase MER0448279
PC C26 unassigned family C26 unassigned peptidases MER0439709
PC C26 unassigned family C26 unassigned peptidases MER0446171
PC C56 C56.001 PfpI peptidase MER0171980
PC C56 C56.A06 DDB_G0276405 (Dictyostelium discoideum) MER0180523
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0172033
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0180878
PC C56 unassigned family C56 unassigned peptidases MER0172245
PE T5 unassigned family T5 unassigned peptidases MER0171939
SB S8 unassigned subfamily S8A unassigned peptidases MER0171843 VspiD_010100009570
SB S8 unassigned subfamily S8A unassigned peptidases MER0191971 VspiD_010100030175
SB S8 unassigned subfamily S8B unassigned peptidases MER1291378
SC S9 S09.010 oligopeptidase B MER0166980
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0209732
SC S9 unassigned subfamily S9A unassigned peptidases MER0192185
SC S9 unassigned subfamily S9B unassigned peptidases MER0489548 VspiD_17645
SC S9 unassigned subfamily S9B unassigned peptidases MER0192270
SC S9 unassigned family S9 unassigned peptidases MER0211159
SC S9 unassigned family S9 unassigned peptidases MER0209094
SC S9 unassigned family S9 unassigned peptidases MER0211623 VspiD_03925
SC S9 unassigned family S9 unassigned peptidases MER0489547
SC S9 unassigned family S9 unassigned peptidases MER0213302
SC S10 unassigned family S10 unassigned peptidases MER0490449 VspiD_00515
SC S33 unassigned family S33 unassigned peptidases MER0214331
SC S33 unassigned family S33 unassigned peptidases MER0381367
SE S11 S11.004 K15-type DD-transpeptidase MER0166825
SE S11 non-peptidase homologue family S11 non-peptidase homologues MER0180651
SE S11 unassigned family S11 unassigned peptidases MER0180416
SE S12 S12.950 esterase EstB MER0180354
SE S12 S12.950 esterase EstB MER0167031
SE S12 unassigned family S12 unassigned peptidases MER0171740
SE S12 unassigned family S12 unassigned peptidases MER0171884
SF S26 non-peptidase homologue subfamily S26A non-peptidase homologues MER0419813
SJ S16 unassigned family S16 unassigned peptidases MER0166724
SJ S16 unassigned family S16 unassigned peptidases MER0361694
SK S14 S14.001 peptidase Clp (type 1) MER0358444
SK S14 unassigned family S14 unassigned peptidases MER0491428 clpP
SK S41 S41.001 C-terminal processing peptidase-1 MER0172302
SK S41 S41.004 C-terminal processing peptidase-3 MER0337123
SK S41 non-peptidase homologue subfamily S41A non-peptidase homologues MER0180177
SK S41 unassigned subfamily S41A unassigned peptidases MER1347691
SK S49 unassigned subfamily S49B unassigned peptidases MER1354513
SK S49 unassigned subfamily S49B unassigned peptidases MER0180461
SK S49 unassigned subfamily S49B unassigned peptidases MER0166344
SK S49 unassigned subfamily S49B unassigned peptidases MER0166408
SK S49 unassigned subfamily S49B unassigned peptidases MER0181006
U- U32 unassigned family U32 unassigned peptidases MER0166772
U- U32 unassigned family U32 unassigned peptidases MER0166773

GENOME ANALYSIS: Comparison with 12 completely sequenced genomes from phylum Verrucomicrobia
Family Comment
C56 lineage specific expansion (5 homologues)
M81 significant presence (1 homologues)
S10 significant presence (1 homologues)
S49 lineage specific expansion (5 homologues)