Aromatoleum aromaticum

Taxonomy
Taxonomy database identifier: 551760
Superkingdom Bacteria
Phylum Proteobacteria
Class Betaproteobacteria
Order Rhodocyclales
Family Rhodocyclaceae
Genus Aromatoleum
Species aromaticum
Peptidase View peptidase sequences from Aromatoleum aromaticum
Count of known and putative peptidases: 6, non-peptidase homologues 3
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AA A32 unassigned family A32 unassigned peptidases MER0241777 ebA5121
AC A8 unassigned family A8 unassigned peptidases MER0039617 lspA ebA4447
AD A24 A24.001 type 4 prepilin peptidase 1 MER0039618 pilD ebA4343
AD A24 unassigned subfamily A24A unassigned peptidases MER0039619 ebA3718
CA C39 non-peptidase homologue family C39 non-peptidase homologues MER0039624 ebA863
CA C39 unassigned family C39 unassigned peptidases MER0039623 ebA1666
CA C39 unassigned family C39 unassigned peptidases MER0039625 ebA4686
CA C93 unassigned family C93 unassigned peptidases MER0394134 ebA1785
CL C82 unassigned subfamily C82A unassigned peptidases MER0461833 ebA5408
CO C40 C40.006 PgpA peptidase MER0039627 ebA4921
CO C40 unassigned family C40 unassigned peptidases MER0039626 ebA6165
MA M3 M03.004 oligopeptidase A MER0041990 prlC ebA1131
MA M41 M41.001 FtsH peptidase MER0042315 hflB ebA4823
MA M41 unassigned family M41 unassigned peptidases MER0042345 ftsH ebA5193
MA M48 unassigned subfamily M48A unassigned peptidases MER0042376 ebA5205
MA M48 unassigned subfamily M48B unassigned peptidases MER0042367 htpX ebA2953
MA M48 unassigned subfamily M48C unassigned peptidases MER0042411 ebA4755
MA M48 unassigned subfamily M48C unassigned peptidases MER0042412 ebA7188
MA M61 M61.002 BcepAP aminopeptidase (Burkholderia cepacia) MER0042495 ebA6315
MA M78 unassigned family M78 unassigned peptidases MER0909419 ebA2392
MA M90 unassigned family M90 unassigned peptidases MER0229060
MC M14 non-peptidase homologue subfamily M14B non-peptidase homologues MER0469145 ebA5565
MC M14 non-peptidase homologue subfamily M14D non-peptidase homologues MER0038362 ebA6023
MD M15 non-peptidase homologue subfamily M15A non-peptidase homologues MER0042066 ebA2889
ME M16 M16.019 YMXG peptidase MER0039633 ebA1394
ME M16 M16.970 SPH2682 protein (Sphingomonas sp. strain A1) MER0039632 ebA1395
MF M17 M17.003 PepA aminopeptidase MER0039634 pepA ebA7174
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0042249 map ebA5984
MG M24 M24.004 aminopeptidase P (bacteria) MER0039639 pepP ebA1146
MH M20 unassigned subfamily M20A unassigned peptidases MER0039635 dapE ebA6388
MH M20 unassigned family M20D unassigned peptidases MER0039636 ebA5427
MH M42 unassigned family M42 unassigned peptidases MER0039640 ebA5273
MJ M38 M38.A02 PyrC protein (Escherichia coli) MER0042703 pyrC ebA1456
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0042789 mtaD ebA911
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0042295 pyrX ebA1760
MJ M38 unassigned family M38 unassigned peptidases MER0042791 guaD ebA4668
MJ M38 unassigned family M38 unassigned peptidases MER0038252 hutI ebA5740
MM M50 unassigned subfamily M50B unassigned peptidases MER0042430 ebA5995
MM M50 unassigned subfamily M50B unassigned peptidases MER0042476 ebA6130
MO M23 M23.009 Mername-AA292 peptidase MER0042201 ebA932
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0042127 ebA779
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0042128 ebA1051
MO M23 unassigned subfamily M23B unassigned peptidases MER0042202 ebA6138
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0039684 tldD ebA969
MU M103 M103.950 microcin-processing peptidase 1 homologue MER0039683 pmbA ebA1031
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0405491 flhB ebA705
PA S1 S01.453 MucD peptidase MER0039643 mucD ebA2969
PA S1 S01.477 AlgW peptidase MER0039642 ebA1283
PA S1 unassigned subfamily S1B unassigned peptidases MER0966167 ebA511
PA S1 unassigned subfamily S1C unassigned peptidases MER0039641 ebA31
PA S1 unassigned subfamily S1C unassigned peptidases MER0039644 degQ ebA5470
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0041939 purF ebA4783
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0041966 asnB ebA5271
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0066040 gls1 ebA2252
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0041935 glmS ebA2244
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0041938 ebA4285
PB C44 unassigned family C44 unassigned peptidases MER0041936 gatC ebA3026
PB C44 unassigned family C44 unassigned peptidases MER0041937 asnB ebA4263
PB C44 unassigned family C44 unassigned peptidases MER0041965 ebA4265
PB C44 unassigned family C44 unassigned peptidases MER0039628 ebA4312
PB T1 T01.006 HslV component of HslUV peptidase MER0042523 hslV ebA2638
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0039676 ggt ebA2869
PC C26 C26.954 carA protein MER0039620 carA ebA4813
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0039622 pabA ebA4199
PC C26 C26.A07 At1g63660 (Arabidopsis thaliana) MER0039621 guaA ebA6645
PE T5 T05.001 ornithine acetyltransferase precursor MER0042561 argJ ebA1431
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0042663 ebA5187
SB S8 unassigned subfamily S8A unassigned peptidases MER0039645 ebA578
SB S8 unassigned subfamily S8A unassigned peptidases MER0039646 ebA1220
SC S9 S09.B04 BSU23640 g.p. (Bacillus subtilis) MER0066043 ebA2870
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0066041 phbZ ebA2560
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0066044 phbZ ebA2902
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0066046 ebA4300
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0066047 ebA4303
SC S9 unassigned subfamily S9C unassigned peptidases MER0039647 ebA3584
SC S9 unassigned family S9 unassigned peptidases MER0997588 ebA5712
SC S9 unassigned family S9 unassigned peptidases MER0039648 lipP ebA43
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0213824
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0214649
SC S33 unassigned family S33 unassigned peptidases MER0039670 ebA546
SC S33 unassigned family S33 unassigned peptidases MER0039665 ebA2753
SC S33 unassigned family S33 unassigned peptidases MER0039664 metX ebA2806
SC S33 unassigned family S33 unassigned peptidases MER0039663 ebA3373
SC S33 unassigned family S33 unassigned peptidases MER0039667 ebA3472
SC S33 unassigned family S33 unassigned peptidases MER0039666 ebA4860
SC S33 unassigned family S33 unassigned peptidases MER0214848
SC S33 unassigned family S33 unassigned peptidases MER0039669 ebA5823
SC S33 unassigned family S33 unassigned peptidases MER0039668 bioH ebA6017
SE S11 S11.007 penicillin-binding protein 4 (Neisseria-type) peptidase MER0039650 pbp ebA4047
SE S11 unassigned family S11 unassigned peptidases MER0039649 ebA3044
SE S13 S13.003 D-Ala-D-Ala carboxypeptidase PBP3 MER0039651 ebA2281
SF S24 S24.001 repressor LexA MER0039659 lexA ebA3086
SF S24 S24.003 UmuD protein MER0119026 rumA p2A243
SF S24 unassigned family S24 unassigned peptidases MER0039660 ebA2
SF S26 S26.001 signal peptidase I MER0039661 lepB ebA5536
SF S26 S26.014 TraF peptidase MER0140299 traF p2B18
SF S26 non-peptidase homologue subfamily S26A non-peptidase homologues MER1050507 trhF
SF S26 non-peptidase homologue subfamily S26C non-peptidase homologues MER0039662 traF ebA6617
SH S78 unassigned family S78 unassigned peptidases MER0039682 ebA5486
SJ S16 S16.001 Lon-A peptidase MER0039654 lon ebA4973
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0039655 radA ebA6481
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0039656 ebA5250
SJ S16 unassigned family S16 unassigned peptidases MER0039658 ebA5433
SK S14 S14.001 peptidase Clp (type 1) MER0039652 clpP ebA4970
SK S14 unassigned family S14 unassigned peptidases MER0039653 ebA7261
SK S41 S41.004 C-terminal processing peptidase-3 MER0039671 ebA1050
SK S49 non-peptidase homologue subfamily S49C non-peptidase homologues MER1073030 ebA7261
SK S49 unassigned subfamily S49A unassigned peptidases MER0036406 c1A237
SK S49 unassigned subfamily S49B unassigned peptidases MER0118407 sppA p1B184
SK S49 unassigned subfamily S49B unassigned peptidases MER0039673 nfeD ebA2632
ST S54 S54.029 rhomboid peptidase 2 (Mycobacterium sp.) MER0039675 ebA480
ST S54 S54.029 rhomboid peptidase 2 (Mycobacterium sp.) MER0039674 ebA6758
U- U32 U32.002 collagenase (Helicobacter-type) MER0039681 ebA2789
U- U32 U32.004 Mername-AA261 putative peptidase (Clostridium beijerinckii) and similar MER0039680 ebA2241
U- U32 U32.004 Mername-AA261 putative peptidase (Clostridium beijerinckii) and similar MER0039678 ebA5191
U- U32 U32.A01 YhbV protein (Escherichia coli) MER0039679 ebA3592
U- U32 unassigned family U32 unassigned peptidases MER0039677 ebA3595

GENOME ANALYSIS: Comparison with 12 completely sequenced genomes from order Rhodocyclales
Family Comment
C26 significant decrease in homologues (3 homologues)
C39 significant presence (3 homologues)
C44 lineage specific expansion (9 homologues)
M20 significant decrease in homologues (2 homologues)
M42 significant presence (1 homologues)
M78 significant presence (1 homologues)
S9 lineage specific expansion (8 homologues)
S26 lineage specific expansion (4 homologues)
S49 lineage specific expansion (4 homologues)
S54 significant presence (2 homologues)
S78 significant presence (1 homologues)