Ruminococcus lactaris

Taxonomy
Taxonomy database identifier: 46228
Superkingdom Bacteria
Phylum Firmicutes
Class Clostridia
Order Clostridiales
Genus Ruminococcus
Family Ruminococcaceae
Species lactaris
Peptidase View peptidase sequences from Ruminococcus lactaris
Count of known and putative peptidases: 43, non-peptidase homologues 15
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0401527 lspA RUMLAC_00448
AC A8 unassigned family A8 unassigned peptidases MER0265819 HMPREF1202_00579/RUMLAC_01677
AD A24 unassigned subfamily A24A unassigned peptidases MER0692679 HMPREF1202_00946
AD A24 unassigned family A24 unassigned peptidases MER0427091
AE A25 A25.001 gpr peptidase MER0184822 gpr RUMLAC_01766
CA C110 C110.UPW family C110 unassigned peptidases MER0626645
CL C60 C60.002 sortase B MER0140965 RUMLAC_00152
CL C60 C60.002 sortase B MER0162267 RUMLAC_02615
CL C60 C60.003 sortase C2 MER0140869 RUMLAC_01948
CL C60 unassigned subfamily C60B unassigned peptidases MER0141333 RUMLAC_01620
CL C82 unassigned subfamily C82A unassigned peptidases MER0140756 RUMLAC_02734
CL C82 unassigned subfamily C82A unassigned peptidases MER0140469 RUMLAC_00532
CO C40 C40.007 YddH peptidase MER0168380 RUMLAC_01435
CO C40 unassigned family C40 unassigned peptidases MER0237846 RUMLAC_00801
CO C40 unassigned family C40 unassigned peptidases MER0722192 HMPREF1202_02130
CO C40 unassigned family C40 unassigned peptidases MER0717941 HMPREF1202_01254
CO C40 unassigned family C40 unassigned peptidases MER0161203 RUMLAC_00897
CO C40 unassigned family C40 unassigned peptidases MER0378340 RUMLAC_01276
CR C108 C108.001 Prp peptidase (Staphylococcus aureus) MER0147820
G- G5 unassigned family G5 unassigned peptidases MER0935996 RUMLAC_00125
G- G5 unassigned family G5 unassigned peptidases MER0912370 RUMLAC_02484
MA M41 unassigned family M41 unassigned peptidases MER0160736 RUMLAC_00290
MA M41 unassigned family M41 unassigned peptidases MER0168081 RUMLAC_00492
MA M41 unassigned family M41 unassigned peptidases MER0363072 ftsH RUMLAC_01104
MA M41 unassigned family M41 unassigned peptidases MER0363582 RUMLAC_01148
MA M56 unassigned family M56 unassigned peptidases MER0168318 RUMLAC_01237
MD M15 unassigned subfamily M15B unassigned peptidases MER0837789 HMPREF1202_02600
MD M15 unassigned subfamily M15B unassigned peptidases MER0311776 RUMLAC_01348
ME M16 unassigned subfamily M16C unassigned peptidases MER0316506 RUMLAC_02047
MG M24 unassigned subfamily M24A unassigned peptidases MER0394815 map RUMLAC_01114
MG M24 unassigned subfamily M24B unassigned peptidases MER0161944 RUMLAC_02279
MH M18 unassigned family M18 unassigned peptidases MER0233803 RUMLAC_02081
MH M18 unassigned family M18 unassigned peptidases MER0161128 RUMLAC_00628
MH M20 non-peptidase homologue subfamily M20A non-peptidase homologues MER0809596 HMPREF1202_02583
MH M20 unassigned subfamily M20A unassigned peptidases MER0805195 RUMLAC_02326
MH M20 unassigned subfamily M20C unassigned peptidases MER0143017 RUMLAC_02428
MH M20 unassigned family M20D unassigned peptidases MER0374927 RUMLAC_01376
MH M20 unassigned family M20 unassigned peptidases MER0137172 RUMLAC_01496
MJ M19 unassigned family M19 unassigned peptidases MER0161060 RUMLAC_00568
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0866334 ade
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0869929 HMPREF1202_00736/nagA
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0862243 pyrC
MM M50 unassigned subfamily M50B unassigned peptidases MER0891871 HMPREF1202_02188/rseP
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0237845 RUMLAC_00801
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0479972
MO M23 unassigned subfamily M23B unassigned peptidases MER0161415 RUMLAC_01644
MQ M29 unassigned family M29 unassigned peptidases MER0856811 HMPREF1202_00527/RUMLAC_00358
PA S1 non-peptidase homologue subfamily S1C non-peptidase homologues MER0217968
PA S1 unassigned subfamily S1C unassigned peptidases MER0206074 RUMLAC_01296
PA S55 S55.001 SpoIVB peptidase MER0140088 RUMLAC_00503
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0144191 RUMLAC_01894
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0458961
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0458960
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0162194 RUMLAC_02613
PB C59 C59.951 choloylglycine hydrolase MER0168945 RUMLAC_00842
PC C26 C26.959 TRP3 protein MER0436080
PC C26 C26.964 CTP synthetase MER0451127
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0443932
PC C26 C26.A21 LD42771 g.p. (Drosophila melanogaster) MER0441561
PC C26 C26.A32 imidazoleglycerol-phosphate synthase (Pyrococcus furiosus) MER0451106
PC C26 unassigned family C26 unassigned peptidases MER0446717
PC C26 unassigned family C26 unassigned peptidases MER0441499
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0142724 RUMLAC_01170
PC S51 non-peptidase homologue family S51 non-peptidase homologues MER0161766 RUMLAC_02252
PE T5 T05.002 ArgJ protein (archea) MER0140363 RUMLAC_00581
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0987743 RUMLAC_00313
SB S8 unassigned subfamily S8A unassigned peptidases MER0974774 RUMLAC_02344
SB S8 unassigned subfamily S8A unassigned peptidases MER0161648 RUMLAC_01986
SE S11 S11.004 K15-type DD-transpeptidase MER0160892 RUMLAC_00454
SE S11 S11.005 D-Ala-D-Ala carboxypeptidase DacF MER0161825 RUMLAC_02264
SE S11 unassigned family S11 unassigned peptidases MER0352393 RUMLAC_00907
SE S11 unassigned family S11 unassigned peptidases MER0161884 RUMLAC_02269
SF S24 S24.001 repressor LexA MER0144349 lexA RUMLAC_00443
SF S24 unassigned family S24 unassigned peptidases MER1332291
SF S26 non-peptidase homologue subfamily S26A non-peptidase homologues MER0247027 RUMLAC_01995
SF S26 unassigned subfamily S26A unassigned peptidases MER0138331 RUMLAC_00208
SF S26 unassigned subfamily S26A unassigned peptidases MER0246725 RUMLAC_01997
SJ S16 S16.001 Lon-A peptidase MER0139300 RUMLAC_01174
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER1033647 RUMLAC_02465
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER1039771 radA
SJ S16 unassigned family S16 unassigned peptidases MER0141909 RUMLAC_00043
SK S14 S14.001 peptidase Clp (type 1) MER0168256 RUMLAC_01172
SK S14 unassigned family S14 unassigned peptidases MER0161704 RUMLAC_02236
SK S41 S41.004 C-terminal processing peptidase-3 MER0288645 RUMLAC_01645
SK S49 non-peptidase homologue subfamily S49C non-peptidase homologues MER1072894 clpP
ST S54 unassigned family S54 unassigned peptidases MER1079975 RUMLAC_01016
U- U32 U32.002 collagenase (Helicobacter-type) MER0143613 RUMLAC_02463
U- U32 unassigned family U32 unassigned peptidases MER0138682 RUMLAC_00390
U- U32 unassigned family U32 unassigned peptidases MER0138683 RUMLAC_00390

GENOME ANALYSIS: Comparison with 23 completely sequenced genomes from family Ruminococcaceae
Family Comment
C108 significant presence (1 homologues)
C82 significant presence (2 homologues)
M23 significant decrease in homologues (3 homologues)
M50 significant decrease in homologues (1 homologues)