Plesiocystis pacifica

Taxonomy
Taxonomy database identifier: 191768
Superkingdom Bacteria
Phylum Proteobacteria
Class Deltaproteobacteria
Order Myxococcales
Species pacifica
Suborder Nannocystineae
Family Nannocystaceae
Genus Plesiocystis
Peptidase View peptidase sequences from Plesiocystis pacifica
Count of known and putative peptidases: 129, non-peptidase homologues 52
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0142950 lspA1 PPSIR1_03508
AC A8 unassigned family A8 unassigned peptidases MER0336124
AD A24 unassigned subfamily A24A unassigned peptidases MER0161124 PPSIR1_03803
AE A31 unassigned family A31 unassigned peptidases MER0427659 PPSIR1_39885
CA C1 unassigned subfamily C1A unassigned peptidases MER0161695 PPSIR1_33706
CA C39 C39.005 colicin V processing peptidase MER0122712 PPSIR1_22636
CA C39 unassigned family C39 unassigned peptidases MER0138728 PPSIR1_09465
CA C83 unassigned family C83 unassigned peptidases MER0100399 PPSIR1_36672
CD C13 unassigned family C13 unassigned peptidases MER0108264 PPSIR1_00105
CD C14 unassigned subfamily C14B unassigned peptidases MER0144695 PPSIR1_20979
CL C82 unassigned subfamily C82A unassigned peptidases MER0125485 PPSIR1_22581
CL C82 unassigned subfamily C82A unassigned peptidases MER0462003
CL C82 unassigned subfamily C82A unassigned peptidases MER0462004
CL C82 unassigned subfamily C82A unassigned peptidases MER0462005
CO C40 unassigned family C40 unassigned peptidases MER0180378
G- G5 unassigned family G5 unassigned peptidases MER0938645 PPSIR1_25034
G- G5 unassigned family G5 unassigned peptidases MER0939657 PPSIR1_18132
G- G5 unassigned family G5 unassigned peptidases MER0911705 PPSIR1_34193
G- G5 unassigned family G5 unassigned peptidases MER0938095 PPSIR1_41124
GC G4 non-peptidase homologue family G4 non-peptidase homologues MER0318977
MA M1 M01.031 cold-active aminopeptidase (Colwellia psychrerythraea)-type peptidase MER0160424 PPSIR1_36167
MA M1 unassigned family M1 unassigned peptidases MER0464973
MA M1 unassigned family M1 unassigned peptidases MER0464974
MA M1 unassigned family M1 unassigned peptidases MER0162923 PPSIR1_17000
MA M2 unassigned family M2 unassigned peptidases MER0105802 PPSIR1_34682
MA M3 unassigned subfamily M3A unassigned peptidases MER0108229 PPSIR1_00590
MA M3 unassigned subfamily M3A unassigned peptidases MER0103305 PPSIR1_20304
MA M4 unassigned family M4 unassigned peptidases MER0160603 PPSIR1_20244
MA M12 unassigned subfamily M12A unassigned peptidases MER0124720 PPSIR1_12188
MA M13 unassigned family M13 unassigned peptidases MER0109667 PPSIR1_33194
MA M13 unassigned family M13 unassigned peptidases MER0109836 PPSIR1_16610
MA M41 M41.001 FtsH peptidase MER0105618 ftsH PPSIR1_09500
MA M41 unassigned family M41 unassigned peptidases MER0169715 PPSIR1_14385
MA M48 non-peptidase homologue subfamily M48B non-peptidase homologues MER0886360 PPSIR1_02516
MA M49 M49.003 dipeptidyl-peptidase IIIB (Bacteroides thetaiotaomicron-type) MER0107856 PPSIR1_29750
MA M54 unassigned family M54 unassigned peptidases MER0126073 PPSIR1_23269
MA M54 unassigned family M54 unassigned peptidases MER0305928 PPSIR1_22344
MA M56 unassigned family M56 unassigned peptidases MER0934260 PPSIR1_35697
MA M56 unassigned family M56 unassigned peptidases MER0934749 PPSIR1_29583
MA M57 M57.001 prtB g.p. (Myxococcus xanthus) MER0117861 PPSIR1_01372
MA M57 M57.001 prtB g.p. (Myxococcus xanthus) MER0117744 PPSIR1_41704
MA M57 unassigned family M57 unassigned peptidases MER0136174 PPSIR1_25111
MA M61 unassigned family M61 unassigned peptidases MER0139172 PPSIR1_40735
MA M61 unassigned family M61 unassigned peptidases MER0160732 PPSIR1_22826
MA M90 unassigned family M90 unassigned peptidases MER0286955 PPSIR1_20519
MC M14 non-peptidase homologue subfamily M14B non-peptidase homologues MER0835798 PPSIR1_36127
MC M14 non-peptidase homologue subfamily M14D non-peptidase homologues MER0309068 PPSIR1_21919
MC M14 unassigned family M14 unassigned peptidases MER0242627 PPSIR1_10560
MC M86 unassigned family M86 unassigned peptidases MER0327969 PPSIR1_23091
MD M15 unassigned subfamily M15B unassigned peptidases MER0469695 PPSIR1_00165
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0126651 PPSIR1_33786
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0168881 PPSIR1_31468
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0159975 PPSIR1_39240
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0161817
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0162001
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0173020
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0173132
ME M16 unassigned subfamily M16B unassigned peptidases MER0161051 PPSIR1_21314
ME M16 unassigned subfamily M16B unassigned peptidases MER0122933 PPSIR1_18120
ME M16 unassigned subfamily M16B unassigned peptidases MER0180350 PPSIR1_22466
ME M16 unassigned family M16 unassigned peptidases MER0160043 PPSIR1_39410
ME M16 unassigned family M16 unassigned peptidases MER0168774
MF M17 unassigned family M17 unassigned peptidases MER0105926 PPSIR1_04268
MF M17 unassigned family M17 unassigned peptidases MER0105927 PPSIR1_32864
MF M17 unassigned family M17 unassigned peptidases MER0162975 PPSIR1_17005
MF M17 unassigned family M17 unassigned peptidases MER0169665 PPSIR1_27903
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0141014 PPSIR1_39060
MG M24 unassigned subfamily M24A unassigned peptidases MER0160497 map PPSIR1_36337
MG M24 unassigned subfamily M24B unassigned peptidases MER0105213 PPSIR1_12373
MG M24 unassigned subfamily M24B unassigned peptidases MER0168074 PPSIR1_12868
MG M24 unassigned subfamily M24B unassigned peptidases MER0172944 PPSIR1_33506
MH M20 non-peptidase homologue subfamily M20F non-peptidase homologues MER0852020 PPSIR1_40994
MH M20 unassigned subfamily M20C unassigned peptidases MER0100597 PPSIR1_33264
MH M20 unassigned family M20D unassigned peptidases MER0126729 PPSIR1_38876
MH M28 unassigned subfamily M28C unassigned peptidases MER1247005
MH M28 unassigned subfamily M28D unassigned peptidases MER0100713 PPSIR1_03213
MH M28 unassigned subfamily M28D unassigned peptidases MER0117743 PPSIR1_34522
MH M28 unassigned subfamily M28F unassigned peptidases MER0100714 PPSIR1_41374
MH M28 unassigned subfamily M28F unassigned peptidases MER0105981 PPSIR1_03558
MH M28 unassigned subfamily M28F unassigned peptidases MER0100715 PPSIR1_04693
MH M28 unassigned subfamily M28F unassigned peptidases MER0105980 PPSIR1_34223
MH M28 unassigned family M28 unassigned peptidases MER0117742 PPSIR1_08496
MJ M19 non-peptidase homologue family M19 non-peptidase homologues MER0766837 PPSIR1_02551
MJ M19 unassigned family M19 unassigned peptidases MER0137726 PPSIR1_18462
MJ M38 M38.978 dihydropyrimidinase related protein-5 MER0863672 PPSIR1_40959
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0860288 hutI
MJ M38 unassigned family M38 unassigned peptidases MER0108038 PPSIR1_16200
MM M50 non-peptidase homologue subfamily M50B non-peptidase homologues MER0896181 PPSIR1_09016
MM M50 unassigned subfamily M50B unassigned peptidases MER0891719 PPSIR1_04333
MM M50 unassigned subfamily M50B unassigned peptidases MER0119133 PPSIR1_31598
MM M50 unassigned family M50 unassigned peptidases MER0895412 PPSIR1_35987
MM M50 unassigned family M50 unassigned peptidases MER0898790 PPSIR1_31793
MO M23 unassigned subfamily M23B unassigned peptidases MER0479586
MO M23 unassigned subfamily M23B unassigned peptidases MER0168309 PPSIR1_29358
MO M23 unassigned family M23 unassigned peptidases MER0479802 PPSIR1_12823
MS M75 unassigned family M75 unassigned peptidases MER0109763 PPSIR1_24909
MU M103 M103.UNW family M103 non-peptidase homologues MER0105803 PPSIR1_09051
MU M103 M103.UPW family M103 unassigned peptidases MER0142417 PPSIR1_09046
PA S1 non-peptidase homologue subfamily S1C non-peptidase homologues MER0407877
PA S1 unassigned subfamily S1A unassigned peptidases MER0159726 PPSIR1_04688
PA S1 unassigned subfamily S1A unassigned peptidases MER0217020
PA S1 unassigned subfamily S1A unassigned peptidases MER0217338
PA S1 unassigned subfamily S1A unassigned peptidases MER0216379
PA S1 unassigned subfamily S1A unassigned peptidases MER0488526
PA S1 unassigned subfamily S1A unassigned peptidases MER0217235
PA S1 unassigned subfamily S1A unassigned peptidases MER0488527
PA S1 unassigned subfamily S1A unassigned peptidases MER0216487
PA S1 unassigned subfamily S1A unassigned peptidases MER0217659
PA S1 unassigned subfamily S1A unassigned peptidases MER0216646 PPSIR1_19599
PA S1 unassigned subfamily S1A unassigned peptidases MER0210590
PA S1 unassigned subfamily S1A unassigned peptidases MER0211433
PA S1 unassigned subfamily S1A unassigned peptidases MER0162399
PA S1 unassigned subfamily S1A unassigned peptidases MER0488528
PA S1 unassigned subfamily S1A unassigned peptidases MER0216727
PA S1 unassigned subfamily S1A unassigned peptidases MER0217176
PA S1 unassigned subfamily S1A unassigned peptidases MER0216866
PA S1 unassigned subfamily S1A unassigned peptidases MER0216237
PA S1 unassigned subfamily S1B unassigned peptidases MER0961253 PPSIR1_32023
PA S1 unassigned subfamily S1B unassigned peptidases MER0216525
PA S1 unassigned subfamily S1C unassigned peptidases MER0901665 PPSIR1_40140
PA S1 unassigned subfamily S1C unassigned peptidases MER0488525
PA S1 unassigned subfamily S1C unassigned peptidases MER0216956
PA S1 unassigned subfamily S1C unassigned peptidases MER0216079 PPSIR1_31773
PA S1 unassigned subfamily S1C unassigned peptidases MER0210501 PPSIR1_26703
PA S1 unassigned subfamily S1D unassigned peptidases MER0119134 PPSIR1_19299
PA S46 S46.003 dipeptidyl-peptidase BII (Pseudoxanthomonas mexicana) MER0109543 PPSIR1_17065
PA S46 S46.003 dipeptidyl-peptidase BII (Pseudoxanthomonas mexicana) MER0109737 PPSIR1_31063
PA S55 unassigned family S55 unassigned peptidases MER0316270 PPSIR1_34542
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0139959 PPSIR1_10080
PB C44 unassigned family C44 unassigned peptidases MER0161876
PB C44 unassigned family C44 unassigned peptidases MER0458834
PB C45 non-peptidase homologue family C45 non-peptidase homologues MER0725632 PPSIR1_11435
PB C45 unassigned family C45 unassigned peptidases MER0168438 PPSIR1_18687
PB S45 S45.002 cephalosporin acylase precursor MER0109479 PPSIR1_20139
PB S45 S45.003 cephalosporin C acylase precursor MER0108998 PPSIR1_20809
PB S45 S45.003 cephalosporin C acylase precursor MER0109544 PPSIR1_24419
PB S45 S45.004 acyl-homoserine lactone acylase MER0109668 PPSIR1_25901
PB T1 unassigned subfamily T1B unassigned peptidases MER0137032 PPSIR1_12143
PB T2 unassigned family T2 unassigned peptidases MER1094885 PPSIR1_10850
PB T2 unassigned family T2 unassigned peptidases MER0180047
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0107403 PPSIR1_10715
PB T3 T03.013 gamma-glutamyltransferase (Synechocystis-type) MER0107537 PPSIR1_04023
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0107538 PPSIR1_05788
PC C26 C26.959 TRP3 protein MER0439006
PC C26 C26.964 CTP synthetase MER0451057
PC C26 C26.A07 At1g63660 (Arabidopsis thaliana) MER0444516 guaA
PC C26 unassigned family C26 unassigned peptidases MER0445533
PC C26 unassigned family C26 unassigned peptidases MER0446235
PC C26 unassigned family C26 unassigned peptidases MER0449872
PC C26 unassigned family C26 unassigned peptidases MER0441410
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0913326 PPSIR1_39460
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0172760
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0160202 PPSIR1_29890
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0160258
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0161641
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0163147
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0169614
PC S51 unassigned family S51 unassigned peptidases MER1055513 PPSIR1_16170
PE P1 unassigned family P01 unassigned peptidases MER0142148 PPSIR1_23139
PE T5 unassigned family T5 unassigned peptidases MER0139067 PPSIR1_28896
SB S8 S08.050 secreted peptidase A MER0173071 PPSIR1_31533
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0974584 PPSIR1_03933
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0970850 PPSIR1_32407
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0988697 PPSIR1_30514
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0968327 PPSIR1_13745
SB S8 unassigned subfamily S8A unassigned peptidases MER0980028 PPSIR1_17185
SB S8 unassigned subfamily S8A unassigned peptidases MER0141198 PPSIR1_33811
SB S8 unassigned subfamily S8A unassigned peptidases MER0159848 PPSIR1_05528
SB S8 unassigned subfamily S8A unassigned peptidases MER0168020 PPSIR1_12763
SB S8 unassigned subfamily S8A unassigned peptidases MER0168940 PPSIR1_02286
SB S8 unassigned subfamily S8A unassigned peptidases MER0162331 PPSIR1_07912
SB S8 unassigned subfamily S8A unassigned peptidases MER0163081 PPSIR1_06401
SB S53 S53.004 kumamolisin MER0162581
SB S53 non-peptidase homologue family S53 non-peptidase homologues MER0123755 PPSIR1_24289
SC S9 S09.010 oligopeptidase B MER0144464 PPSIR1_05683
SC S9 S09.010 oligopeptidase B MER0138974 PPSIR1_27068
SC S9 S09.012 dipeptidyl-peptidase 5 MER0123614 PPSIR1_32213
SC S9 S09.012 dipeptidyl-peptidase 5 MER0138377 PPSIR1_04788
SC S9 S09.021 glutamyl endopeptidase C MER0105867 PPSIR1_04583
SC S9 S09.076 prolyl oligopeptidase (Myxococcus xanthus) MER0180019 PPSIR1_14115
SC S9 S09.A03 At5g24260 (Arabidopsis thaliana) MER0142767 PPSIR1_04468 PPSIR1_04468
SC S9 S09.A96 DDB_G0281415 g.p. (Dictyostelium discoideum) MER0168554 PPSIR1_32974
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0213628
SC S9 unassigned subfamily S9A unassigned peptidases MER0138636 PPSIR1_26313 PPSIR1_26313
SC S9 unassigned subfamily S9A unassigned peptidases MER0109599 PPSIR1_11150
SC S9 unassigned subfamily S9C unassigned peptidases MER1303126
SC S9 unassigned family S9 unassigned peptidases MER0477538
SC S9 unassigned family S9 unassigned peptidases MER0213516
SC S9 unassigned family S9 unassigned peptidases MER0209768
SC S10 unassigned family S10 unassigned peptidases MER0490408
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1023447 PPSIR1_40115
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1019679 PPSIR1_01799
SC S33 S33.001 prolyl aminopeptidase MER0100598 PPSIR1_40320
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0214732
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0208754
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0210130
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0210997
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0118742 PPSIR1_01062
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0209019
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0209020
SC S33 unassigned family S33 unassigned peptidases MER0215534
SC S33 unassigned family S33 unassigned peptidases MER0209267
SC S33 unassigned family S33 unassigned peptidases MER0215404
SC S33 unassigned family S33 unassigned peptidases MER0213065
SE S12 non-peptidase homologue family S12 non-peptidase homologues MER0945905 PPSIR1_02703
SE S12 unassigned family S12 unassigned peptidases MER1009481 PPSIR1_24949
SE S12 unassigned family S12 unassigned peptidases MER1003714 PPSIR1_24674
SE S12 unassigned family S12 unassigned peptidases MER1028620 PPSIR1_26878
SE S12 unassigned family S12 unassigned peptidases MER0987958 PPSIR1_41444
SE S12 unassigned family S12 unassigned peptidases MER0122070 PPSIR1_26803
SE S12 unassigned family S12 unassigned peptidases MER0125948 PPSIR1_16660
SE S12 unassigned family S12 unassigned peptidases MER0420302
SE S12 unassigned family S12 unassigned peptidases MER0168611 PPSIR1_19919
SE S12 unassigned family S12 unassigned peptidases MER0168719 PPSIR1_17755
SE S12 unassigned family S12 unassigned peptidases MER0180241 PPSIR1_26006
SE S12 unassigned family S12 unassigned peptidases MER0180317 PPSIR1_22441
SE S12 unassigned family S12 unassigned peptidases MER0355022 PPSIR1_31028
SE S13 S13.004 penillin-binding protein 4 MER0124619 PPSIR1_19659
SE S13 S13.004 penillin-binding protein 4 MER0105524 PPSIR1_02306
SE S13 unassigned family S13 unassigned peptidases MER0105523 PPSIR1_01909
SF S24 S24.001 repressor LexA MER0125372 lexA PPSIR1_42079
SF S26 non-peptidase homologue subfamily S26A non-peptidase homologues MER1047767 PPSIR1_11500
SF S26 unassigned subfamily S26A unassigned peptidases MER0105297 PPSIR1_10795
SJ S16 S16.001 Lon-A peptidase MER0108861 PPSIR1_39370
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER1034289 PPSIR1_27313
SJ S16 unassigned family S16 unassigned peptidases MER0109312 PPSIR1_13240
SJ S16 unassigned family S16 unassigned peptidases MER0108919 PPSIR1_41599
SJ S16 unassigned family S16 unassigned peptidases MER0109925 PPSIR1_12563
SK S14 S14.001 peptidase Clp (type 1) MER0119477 clpP PPSIR1_35517
SK S14 unassigned family S14 unassigned peptidases MER1321226
SK S41 S41.012 Pep putative peptidase (Vibrio-type) MER1056401 PPSIR1_40485
SK S41 non-peptidase homologue subfamily S41A non-peptidase homologues MER1057413 PPSIR1_39860
SK S41 non-peptidase homologue subfamily S41A non-peptidase homologues MER0338247 PPSIR1_32437
SK S41 unassigned subfamily S41A unassigned peptidases MER0105453 PPSIR1_35557
SK S41 unassigned subfamily S41A unassigned peptidases MER0160783 PPSIR1_32123
SK S41 unassigned subfamily S41A unassigned peptidases MER0141853 PPSIR1_32452
SK S41 unassigned subfamily S41A unassigned peptidases MER0120228 PPSIR1_33526
SK S49 non-peptidase homologue subfamily S49B non-peptidase homologues MER0105114 PPSIR1_34317
SK S49 unassigned subfamily S49A unassigned peptidases MER0105113 PPSIR1_02081
SK S49 unassigned subfamily S49A unassigned peptidases MER1352207
SK S49 unassigned subfamily S49A unassigned peptidases MER1352013
SK S49 unassigned subfamily S49B unassigned peptidases MER0105115 PPSIR1_15100
SS S66 S66.001 murein tetrapeptidase LD-carboxypeptidase (Pseudomonas-type) MER0160551 PPSIR1_35962
ST S54 S54.027 RhoII peptidase (Haloferax volcanii) and similar MER0109259 PPSIR1_37564
ST S54 non-peptidase homologue family S54 non-peptidase homologues MER1081228 PPSIR1_08766
ST S54 unassigned family S54 unassigned peptidases MER1079251 PPSIR1_05193
ST S54 unassigned family S54 unassigned peptidases MER1082730 PPSIR1_02341
ST S54 unassigned family S54 unassigned peptidases MER1081825 PPSIR1_26658
ST S54 unassigned family S54 unassigned peptidases MER0112291 PPSIR1_32804
U- U72 unassigned family U72 unassigned peptidases MER0398212

GENOME ANALYSIS: Comparison with 20 completely sequenced genomes from order Myxococcales
Family Comment
A31 significant decrease in homologues (1 homologues)
C13 significant presence (1 homologues)
C83 significant presence (1 homologues)
G4 significant presence (1 homologues)
M17 lineage specific expansion (4 homologues)
M20 significant decrease in homologues (3 homologues)
M23 significant decrease in homologues (3 homologues)
M38 significant decrease in homologues (3 homologues)
M48 significant decrease in homologues (1 homologues)
M49 significant presence (1 homologues)
M75 significant presence (1 homologues)
M86 significant presence (1 homologues)
S10 significant presence (1 homologues)
S51 significant presence (1 homologues)
S55 significant presence (1 homologues)
T5 significant decrease in homologues (1 homologues)
U72 significant presence (1 homologues)