Desulfovibrio vulgaris

Taxonomy
Taxonomy database identifier: 881
Superkingdom Bacteria
Phylum Proteobacteria
Species vulgaris
Class Deltaproteobacteria
Order Desulfovibrionales
Family Desulfovibrionaceae
Genus Desulfovibrio
Peptidase View peptidase sequences from Desulfovibrio vulgaris
Count of known and putative peptidases: 149, non-peptidase homologues 58
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0151720 lspA DvMF_0265
AC A8 unassigned family A8 unassigned peptidases MER0040280 lspA Dvul_1239
AD A24 A24.019 ComC peptidase MER0151759 DvMF_1037
AD A24 A24.019 ComC peptidase MER0040281 Deval_1163
AD A24 unassigned subfamily A24A unassigned peptidases MER0040282 Deval_1967 Dvul_1114
AD A24 unassigned subfamily A24A unassigned peptidases MER0151831 DvMF_2743
AE A31 unassigned family A31 unassigned peptidases MER0040305 DvMF_0269
AE A31 unassigned family A31 unassigned peptidases MER0151721 DvMF_0272
AE A31 unassigned family A31 unassigned peptidases MER0040306 Deval_1390
AE A31 unassigned family A31 unassigned peptidases MER0184883 Deval_1387
CA C39 non-peptidase homologue family C39 non-peptidase homologues MER0151764 DvMF_1104
CA C93 unassigned family C93 unassigned peptidases MER0393583 DvMF_1158
CA C93 unassigned family C93 unassigned peptidases MER0152754 DVU_1019
CL C82 unassigned subfamily C82A unassigned peptidases MER0151780 DvMF_1470
CO C40 C40.006 PgpA peptidase MER0151748 DvMF_0781
CO C40 C40.006 PgpA peptidase MER0040288 DVU_1392
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0151776
CO C40 unassigned family C40 unassigned peptidases MER0151799 DvMF_2028
CO C40 unassigned family C40 unassigned peptidases MER0040287 Dvul_2088
CO C40 unassigned family C40 unassigned peptidases MER0453749
CO C40 unassigned family C40 unassigned peptidases MER0040289 Dvul_0199
G- G5 unassigned family G5 unassigned peptidases MER0076747 Dvul_3086
G- G5 unassigned family G5 unassigned peptidases MER0151746 DvMF_0695
MA M41 M41.001 FtsH peptidase MER0042305 ftsH Deval_1177
MA M41 unassigned family M41 unassigned peptidases MER0151712 ftsH DvMF_0055
MA M48 non-peptidase homologue family M48 non-peptidase homologues MER0888663 DvMF_2664
MA M48 unassigned subfamily M48B unassigned peptidases MER0151755 htpX DvMF_0946
MA M48 unassigned subfamily M48B unassigned peptidases MER0042361 htpX Dvul_0750
MA M48 unassigned subfamily M48C unassigned peptidases MER0042393 DVU_3388
MA M48 unassigned subfamily M48C unassigned peptidases MER0151735 DvMF_0483
MA M48 unassigned subfamily M48C unassigned peptidases MER0042392 DVU_1578
MA M48 unassigned family M48 unassigned peptidases MER0151800 DvMF_2068
MA M61 non-peptidase homologue family M61 non-peptidase homologues MER0903453 Deval_2165/DVU_2336
MA M61 non-peptidase homologue family M61 non-peptidase homologues MER0901190 DvMF_3158
MD M15 unassigned subfamily M15B unassigned peptidases MER0151808 DvMF_2267
MD M15 unassigned family M15 unassigned peptidases MER0042070 Dvul_0191
ME M16 M16.012 PreP1 peptidase (Arabidopsis-type) MER0151774 DvMF_1365
ME M16 M16.012 PreP1 peptidase (Arabidopsis-type) MER0040294 DVU_0941
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0151719 DvMF_0236
ME M16 unassigned subfamily M16B unassigned peptidases MER0151718 DvMF_0236
ME M16 unassigned subfamily M16B unassigned peptidases MER0040292 Dvul_1646
ME M16 unassigned subfamily M16B unassigned peptidases MER0040293 Dvul_0850
MF M17 unassigned family M17 unassigned peptidases MER0151784 pepA DvMF_1538
MF M17 unassigned family M17 unassigned peptidases MER0040295 pepA DVU_0415
MG M24 non-peptidase homologue subfamily M24B non-peptidase homologues MER0151842 DvMF_3039
MG M24 non-peptidase homologue subfamily M24B non-peptidase homologues MER0040302 DVU_1000
MG M24 unassigned subfamily M24A unassigned peptidases MER0151713 DvMF_0100
MG M24 unassigned subfamily M24A unassigned peptidases MER0042215 map DVU_1324
MG M24 unassigned subfamily M24B unassigned peptidases MER0151797 DvMF_1929
MG M24 unassigned subfamily M24B unassigned peptidases MER0040303 DVU_0296
MH M18 unassigned family M18 unassigned peptidases MER0151773 DvMF_1314
MH M18 unassigned family M18 unassigned peptidases MER0040296 Deval_2664
MH M20 unassigned family M20D unassigned peptidases MER0040299 Dvul_0678
MH M20 unassigned family M20D unassigned peptidases MER0151757 DvMF_1012
MH M20 unassigned family M20 unassigned peptidases MER0151740 DvMF_0550
MH M20 unassigned family M20 unassigned peptidases MER0151758 DvMF_1019
MH M20 unassigned family M20 unassigned peptidases MER0040298 DVU_1827
MH M20 unassigned family M20 unassigned peptidases MER0040297 DVU_2575
MJ M38 M38.981 guanine deaminase MER0042766 mtaD DVU_1825
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0076506 Dvul_0465
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0076530 mtaD Dvul_1335
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0076566 ade Dvul_2495
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0151739 mtaD DvMF_0548
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0151777 DvMF_1424
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0151778 DvMF_1426
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0038332 Dvul_0463
MJ M38 unassigned family M38 unassigned peptidases MER0042765 ade DVU_0441
MJ M38 unassigned family M38 unassigned peptidases MER0042767 DVU_2900
MM M50 unassigned subfamily M50A unassigned peptidases MER0151837 DvMF_2914
MM M50 unassigned subfamily M50B unassigned peptidases MER0151814 DvMF_2335
MM M50 unassigned subfamily M50B unassigned peptidases MER0042449 Dvul_2826
MM M50 unassigned subfamily M50B unassigned peptidases MER0042450 Dvul_2117
MO M23 M23.009 Mername-AA292 peptidase MER0042095 DVU_3395
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0151850 DvMF_3157
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0151801 DvMF_2080
MO M23 non-peptidase homologue family M23 non-peptidase homologues MER0042648 Dvul_0922
MO M23 unassigned subfamily M23B unassigned peptidases MER0042145 Dvul_0148
MO M23 unassigned subfamily M23B unassigned peptidases MER0151728 DvMF_0414
MO M23 unassigned subfamily M23B unassigned peptidases MER0151809 DvMF_2292
MO M23 unassigned subfamily M23B unassigned peptidases MER0151820 DvMF_2522
MO M23 unassigned subfamily M23B unassigned peptidases MER0151716 DvMF_0123
MO M23 unassigned subfamily M23B unassigned peptidases MER0042144 Dvul_2424
MO M23 unassigned subfamily M23B unassigned peptidases MER0042146 Dvul_1311
MO M23 unassigned subfamily M23B unassigned peptidases MER0042147 DVU_3240
MQ M29 unassigned family M29 unassigned peptidases MER0151833 DvMF_2795
MQ M29 unassigned family M29 unassigned peptidases MER0040304 DVU_0759
NB N6 N06.001 YscU protein MER0326817
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0405378 flhB DvMF_2015
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0327380
PA S1 S01.453 MucD peptidase MER0040307 DVU_1468
PA S1 unassigned subfamily S1C unassigned peptidases MER0151723 DvMF_0308 DvMF_0308
PA S1 unassigned subfamily S1C unassigned peptidases MER0151803 DvMF_2121 DvMF_2121
PA S1 unassigned subfamily S1C unassigned peptidases MER0040308 Dvul_0112
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0151812 DvMF_2307
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0041871 purF DVU_0161
PB C44 C44.A09 PF0204 protein (Pyrococcus furiosus ) MER0151737 DvMF_0545
PB C44 C44.A09 PF0204 protein (Pyrococcus furiosus ) MER0038388 Dvul_1338
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0151790 DvMF_1706
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0041952 glmS DVU_3156
PB C44 unassigned family C44 unassigned peptidases MER0076493 Dvul_0104
PB C44 unassigned family C44 unassigned peptidases MER0151818 DvMF_2387
PB C44 unassigned family C44 unassigned peptidases MER0076746 Dvul_3035
PB C44 unassigned family C44 unassigned peptidases MER0041951 DVU_3014
PB T1 T01.007 CodW component of CodWX peptidase MER0151736 hslV DvMF_0485
PB T1 T01.007 CodW component of CodWX peptidase MER0042528 hslV Dvul_1556
PB T2 unassigned family T2 unassigned peptidases MER0151751 DvMF_0839
PB T2 unassigned family T2 unassigned peptidases MER0042541 DVU_2242
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0151848 DvMF_3118
PC C26 C26.954 carA protein MER0040284 carA Dvul_0268
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0151792 DvMF_1745
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0040286 Dvul_2471
PC C26 C26.964 CTP synthetase MER0151729 pyrG DvMF_0433
PC C26 C26.A04 At3g27740 (Arabidopsis thaliana) MER0042866 carA DvMF_2370
PC C26 C26.A07 At1g63660 (Arabidopsis thaliana) MER0151849 guaA DvMF_3125
PC C26 non-peptidase homologue family C26 non-peptidase homologues MER0151834 cobQ DvMF_2864
PC C26 unassigned family C26 unassigned peptidases MER0151711 DvMF_0015
PC C26 unassigned family C26 unassigned peptidases MER0151811 hisH DvMF_2305
PC C26 unassigned family C26 unassigned peptidases MER0151813 DvMF_2316
PC C26 unassigned family C26 unassigned peptidases MER0151770 DvMF_1245
PC C26 unassigned family C26 unassigned peptidases MER0040285 Dvul_2620
PC C26 unassigned family C26 unassigned peptidases MER0040283 guaA Dvul_1950
PC C56 C56.001 PfpI peptidase MER0040290 DVU_1933
PC C56 C56.001 PfpI peptidase MER0151743 DvMF_0594
PC C56 C56.A06 DDB_G0276405 (Dictyostelium discoideum) MER0151840 DvMF_3031
PC C56 C56.A06 DDB_G0276405 (Dictyostelium discoideum) MER0040291 Dvul_1994
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0151730 DvMF_0434
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0151806 DvMF_2185
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0151822 DvMF_2560
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0151823 DvMF_2562
PE T5 unassigned family T5 unassigned peptidases MER0151835 argJ DvMF_2872
PE T5 unassigned family T5 unassigned peptidases MER0042564 argJ DVU_0823
SB S8 unassigned subfamily S8A unassigned peptidases MER0076571 Dvul_2776
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0076510 Dvul_0630
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0151810 DvMF_2303
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0151838 DvMF_2946
SC S9 unassigned family S9 unassigned peptidases MER0151738 DvMF_0547
SC S9 unassigned family S9 unassigned peptidases MER0151762 DvMF_1076
SC S9 unassigned family S9 unassigned peptidases MER0151841 DvMF_3032
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0040327 DVU_0642
SC S33 unassigned family S33 unassigned peptidases MER0076519 Dvul_1008
SC S33 unassigned family S33 unassigned peptidases MER0151750 DvMF_0829
SC S33 unassigned family S33 unassigned peptidases MER0151771 DvMF_1247
SE S11 S11.005 D-Ala-D-Ala carboxypeptidase DacF MER0151766 DvMF_1122
SE S11 S11.005 D-Ala-D-Ala carboxypeptidase DacF MER0040310 DVU_2655
SF S24 S24.003 UmuD protein MER0040320 umuD DVU_2907
SF S24 S24.003 UmuD protein MER0151779 DvMF_1435
SF S24 unassigned family S24 unassigned peptidases MER0040323 DVU_1674
SF S24 unassigned family S24 unassigned peptidases MER0151725 DvMF_0352
SF S24 unassigned family S24 unassigned peptidases MER0151747 DvMF_0710
SF S24 unassigned family S24 unassigned peptidases MER0151763 DvMF_1094
SF S24 unassigned family S24 unassigned peptidases MER0151772 DvMF_1261
SF S24 unassigned family S24 unassigned peptidases MER0151787 DvMF_1678
SF S24 unassigned family S24 unassigned peptidases MER1331059
SF S24 unassigned family S24 unassigned peptidases MER0040322 DVU_1144
SF S24 unassigned family S24 unassigned peptidases MER0040324 DVU_1519
SF S24 unassigned family S24 unassigned peptidases MER0040321 DVU_2633
SF S24 unassigned family S24 unassigned peptidases MER0040325 DVU_2686
SF S26 S26.025 signal peptidase sipX MER0151829 DvMF_2718
SF S26 S26.025 signal peptidase sipX MER0040326 Deval_0649
SH S73 S73.001 gpO peptidase (Enterobacteria phage P2) MER0151001 Dvul_2766
SH S78 S78.001 prohead peptidase (bacteriophage HK97) MER0076515 Dvul_0868
SH S78 S78.001 prohead peptidase (bacteriophage HK97) MER0151786 DvMF_1656
SJ S16 S16.001 Lon-A peptidase MER0151715 DvMF_0112
SJ S16 S16.001 Lon-A peptidase MER0040313 Dvul_1866
SJ S16 S16.001 Lon-A peptidase MER0040314 Deval_1231
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0151734 DvMF_0471
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0040315 Dvul_1543
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0151830 DvMF_2719
SJ S16 unassigned family S16 unassigned peptidases MER0151724 DvMF_0312
SJ S16 unassigned family S16 unassigned peptidases MER0151742 DvMF_0590
SJ S16 unassigned family S16 unassigned peptidases MER0151802 DvMF_2107
SJ S16 unassigned family S16 unassigned peptidases MER0151845 DvMF_3084
SJ S16 unassigned family S16 unassigned peptidases MER0040318 DVU_1472
SJ S16 unassigned family S16 unassigned peptidases MER0040317 Dvul_1270
SJ S16 unassigned family S16 unassigned peptidases MER0040319 Dvul_0092
SK S14 S14.001 peptidase Clp (type 1) MER0151714 clpP DvMF_0110
SK S14 S14.001 peptidase Clp (type 1) MER0040311 clpP Dvul_1734
SK S14 non-peptidase homologue family S14 non-peptidase homologues MER0040312 DVU_1501
SK S41 S41.004 C-terminal processing peptidase-3 MER0151851 DvMF_3158
SK S41 S41.004 C-terminal processing peptidase-3 MER0040328 Dvul_0923
SK S49 S49.003 protein C (bacteriophage lambda) MER0040329 DVU_0198
SK S49 S49.003 protein C (bacteriophage lambda) MER0040330 Dvul_1063
SK S49 S49.A08 BSn5_05605 g.p. (Bacillus subtilis) MER0151852 DvMF_3163
SK S49 non-peptidase homologue subfamily S49A unassigned non-peptidase homologues MER0151789 DvMF_1703
SK S49 non-peptidase homologue subfamily S49A unassigned non-peptidase homologues MER1068371 Deval_1791/DVU_1501
SK S49 unassigned subfamily S49B unassigned peptidases MER1356051
SK S49 unassigned subfamily S49B unassigned peptidases MER1354442
SK S49 unassigned subfamily S49B unassigned peptidases MER1355940
SK S49 unassigned subfamily S49B unassigned peptidases MER0040332 sppA DVU_3149
ST S54 S54.027 RhoII peptidase (Haloferax volcanii) and similar MER0151753 DvMF_0913
ST S54 S54.027 RhoII peptidase (Haloferax volcanii) and similar MER0040334 DVU_1023
ST S54 unassigned family S54 unassigned peptidases MER0151847 DvMF_3108
ST S54 unassigned family S54 unassigned peptidases MER0040333 Dvul_1844
U- U32 unassigned family U32 unassigned peptidases MER0040336 DVU_3314
U- U32 unassigned family U32 unassigned peptidases MER0151804 DvMF_2141
U- U32 unassigned family U32 unassigned peptidases MER0151825 DvMF_2645
U- U32 unassigned family U32 unassigned peptidases MER0040335 DVU_0654

GENOME ANALYSIS: Comparison with 19 completely sequenced genomes from genus Desulfovibrio
Family Comment
A24 lineage specific expansion (4 homologues)
C40 lineage specific expansion (7 homologues)
C44 lineage specific expansion (10 homologues)
C56 lineage specific expansion (8 homologues)
M38 lineage specific expansion (10 homologues)
S24 lineage specific expansion (13 homologues)
S49 lineage specific expansion (9 homologues)
S73 significant presence (1 homologues)
S78 significant presence (2 homologues)
T2 significant presence (2 homologues)