Substrates for peptidase S41.011: chlamydial protease-like activity factor
Peptide and protein substrates that are thought to be physiologically relevant are indicated by P. Peptide and protein substrates that are thought to be pathologically relevant are indicated by D. Peptide and protein substrates that are not physiologically relevant are indicated by N. Synthetic substrates are indicated by S. Click on the symbol to show only physiological, non-physiological or synthetic substrates, or here to display all substrates. How cleavage sites have been identified are indicated by the following evidence codes: NT = N-terminal sequencing, MS = mass spectroscopy, MU = mutation, CS = consensus sequence, LC = liquid chromatography. To see all annotated cleavages for a protein substrate, click on the UniProt Accession.
| Substrate | Uniprot | Residue range | Cleavage Site | Cleavage type | Evidence | P4 | P3 | P2 | P1 | P1' | P2' | P3' | P4' | Reference | CutDB | MERNUM |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase | P62707 | 153-167 | peptide-Ala155+Leu-peptide | N | MS | Glu | Ser | Leu | Ala | Leu | Thr | Ile | Asp | Biniossek et al., 2016 | ||
| 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase | P62707 | 153-167 | peptide-Leu156+Thr-peptide | N | MS | Ser | Leu | Ala | Leu | Thr | Ile | Asp | Arg | Biniossek et al., 2016 | ||
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | P37689 | 483-500 | peptide-Ser495+Leu-peptide | N | MS | Thr | Met | Leu | Ser | Leu | Met | Gly | Met | Biniossek et al., 2016 | ||
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | P37689 | 22-53 | peptide-Ala40+Asn-peptide | N | MS | Ala | Leu | Trp | Ala | Asn | Arg | Pro | His | Biniossek et al., 2016 | ||
| 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase | P37769 | 10-44 | peptide-Gly39+Ile-peptide | N | MS | Asp | Ile | Val | Gly | Ile | Asn | Ile | Val | Biniossek et al., 2016 | ||
| 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase | P37769 | 176-203 | peptide-Met191+Ala-peptide | N | MS | Pro | Gly | Tyr | Met | Ala | Thr | Asn | Asn | Biniossek et al., 2016 | ||
| 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase | P37769 | 83-99 | peptide-Ile88+Leu-peptide | N | MS | His | Ile | Asp | Ile | Leu | Val | Asn | Asn | Biniossek et al., 2016 | ||
| 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase | P37769 | 176-203 | peptide-Ala192+Thr-peptide | N | MS | Gly | Tyr | Met | Ala | Thr | Asn | Asn | Thr | Biniossek et al., 2016 | ||
| 2-dehydro-3-deoxygluconokinase | P37647 | 190-201 | peptide-Phe195+Leu-peptide | N | MS | Asp | Ile | Ala | Phe | Leu | Thr | Leu | Asp | Biniossek et al., 2016 | ||
| 2-dehydro-3-deoxygluconokinase | P37647 | 225-241 | peptide-Ala231+Asp-peptide | N | MS | Lys | Arg | Gly | Ala | Asp | Ser | Cys | Leu | Biniossek et al., 2016 | ||
| 2-dehydro-3-deoxyphosphooctonate aldolase | P0A715 | 1-29 | peptide-Leu21+Phe-peptide | N | MS | Pro | Phe | Val | Leu | Phe | Gly | Gly | Met | Biniossek et al., 2016 | ||
| 2-dehydro-3-deoxyphosphooctonate aldolase | P0A715 | 262-278 | peptide-Met267+Lys-peptide | N | MS | Leu | Lys | Gln | Met | Lys | Ala | Ile | Asp | Biniossek et al., 2016 | ||
| 2-iminobutanoate/2-iminopropanoate deaminase | P0AF93 | 93-97 | peptide-Phe94+Phe-peptide | N | MS | Tyr | Glu | Ala | Phe | Phe | Thr | Glu | His | Biniossek et al., 2016 | ||
| 3-deoxy-manno-octulosonate cytidylyltransferase | P04951 | 65-77 | peptide-Met67+Thr-peptide | N | MS | Glu | Val | Cys | Met | Thr | Arg | Ala | Asp | Biniossek et al., 2016 | ||
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ | P0A6Q6 | 16-33 | peptide-Leu24+Leu-peptide | N | MS | Phe | Pro | Phe | Leu | Leu | Val | Asp | Arg | Biniossek et al., 2016 | ||
| 3-hydroxyadipyl-CoA dehydrogenase | P76083 | 268-288 | peptide-Gly275+Lys-peptide | N | MS | Gly | Arg | Leu | Gly | Lys | Lys | Ser | Gly | Biniossek et al., 2016 | ||
| 3-mercaptopyruvate sulfurtransferase | P31142 | 2-14 | peptide-Gly8+Ala-peptide | N | MS | Trp | Phe | Val | Gly | Ala | Asp | Trp | Leu | Biniossek et al., 2016 | ||
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | P31057 | 118-121 | peptide-Trp118+Leu-peptide | N | MS | Gly | Gly | Glu | Trp | Leu | Val | Glu | Thr | Biniossek et al., 2016 | ||
| 3-oxoacyl-[acyl-carrier-protein] reductase FabG | P0AEK2 | 169-185 | peptide-Ile174+Thr-peptide | N | MS | Ser | Arg | Gly | Ile | Thr | Val | Asn | Val | Biniossek et al., 2016 | ||
| 3-oxoacyl-[acyl-carrier-protein] synthase 1 | P0A953 | 201-216 | peptide-Ala203+Met-peptide | N | MS | Glu | Phe | Asp | Ala | Met | Gly | Ala | Leu | Biniossek et al., 2016 | ||
| 3-oxoacyl-[acyl-carrier-protein] synthase 2 | P0AAI5 | 97-116 | peptide-Ala103+Ala-peptide | N | MS | Arg | Ile | Gly | Ala | Ala | Ile | Gly | Ser | Biniossek et al., 2016 | ||
| 30S ribosomal protein S1 | P0AG67 | 195-233 | peptide-Phe208+Val-peptide | N | MS | Tyr | Gly | Ala | Phe | Val | Asp | Leu | Gly | Biniossek et al., 2016 | ||
| 30S ribosomal protein S1 | P0AG67 | 528-538 | peptide-Ala530+Ile-peptide | N | MS | Glu | Lys | Asp | Ala | Ile | Ala | Thr | Val | Biniossek et al., 2016 | ||
| 30S ribosomal protein S1 | P0AG67 | 309-329 | peptide-Ser319+Lys-peptide | N | MS | Ile | His | Pro | Ser | Lys | Val | Val | Asn | Biniossek et al., 2016 | ||
| 30S ribosomal protein S1 | P0AG67 | 415-425 | peptide-Ala417+Val-peptide | N | MS | Glu | Ile | Ala | Ala | Val | Val | Leu | Gln | Biniossek et al., 2016 | ||
| 30S ribosomal protein S1 | P0AG67 | 252-264 | peptide-Leu257+Gly-peptide | N | MS | Arg | Val | Ser | Leu | Gly | Leu | Lys | Gln | Biniossek et al., 2016 | ||
| 30S ribosomal protein S10 | P0A7R5 | 1-24 | peptide-Ala12+Phe-peptide | N | MS | Arg | Leu | Lys | Ala | Phe | Asp | His | Arg | Biniossek et al., 2016 | ||
| 30S ribosomal protein S10 | P0A7R5 | 48-66 | peptide-Leu52+Ile-peptide | N | MS | Phe | Thr | Val | Leu | Ile | Ser | Pro | His | Biniossek et al., 2016 | ||
| 30S ribosomal protein S10 | P0A7R5 | 28-47 | peptide-Ala34+Gln-peptide | N | MS | Arg | Thr | Gly | Ala | Gln | Val | Arg | Gly | Biniossek et al., 2016 | ||
| 30S ribosomal protein S10 | P0A7R5 | 48-66 | peptide-Val51+Leu-peptide | N | MS | Arg | Phe | Thr | Val | Leu | Ile | Ser | Pro | Biniossek et al., 2016 | ||
| 30S ribosomal protein S12 | P0A7S3 | 26-62 | peptide-Val55+Arg-peptide | N | MS | Val | Cys | Arg | Val | Arg | Leu | Thr | Asn | Biniossek et al., 2016 | ||
| 30S ribosomal protein S13 | P0A7S9 | 1-41 | peptide-Ala18+Leu-peptide | N | MS | Ala | Val | Ile | Ala | Leu | Thr | Ser | Ile | Biniossek et al., 2016 | ||
| 30S ribosomal protein S13 | P0A7S9 | 1-41 | peptide-Ala32+Ile-peptide | N | MS | Arg | Ser | Lys | Ala | Ile | Leu | Ala | Ala | Biniossek et al., 2016 | ||
| 30S ribosomal protein S14 | P0AG59 | 27-39 | peptide-Ala29+Ile-peptide | N | MS | Glu | Leu | Lys | Ala | Ile | Ile | Ser | Asp | Biniossek et al., 2016 | ||
| 30S ribosomal protein S19 | P0A7U3 | 25-65 | peptide-Gly46+Leu-peptide | N | MS | Asn | Met | Ile | Gly | Leu | Thr | Ile | Ala | Biniossek et al., 2016 | ||
| 30S ribosomal protein S3 | P0A7V3 | 86-105 | peptide-Ala92+Asp-peptide | N | MS | Lys | Val | Val | Ala | Asp | Ile | Ala | Gly | Biniossek et al., 2016 | ||
| 30S ribosomal protein S3 | P0A7V3 | 111-125 | peptide-Ala113+Lys-peptide | N | MS | Glu | Leu | Asp | Ala | Lys | Leu | Val | Ala | Biniossek et al., 2016 | ||
| 30S ribosomal protein S3 | P0A7V3 | 47-58 | peptide-Ala50+Ser-peptide | N | MS | Leu | Ala | Lys | Ala | Ser | Val | Ser | Arg | Biniossek et al., 2016 | ||
| 30S ribosomal protein S4 | P0A7V8 | 96-113 | peptide-Met105+Gly-peptide | N | MS | Val | Tyr | Arg | Met | Gly | Phe | Gly | Ala | Biniossek et al., 2016 | ||
| 30S ribosomal protein S6 | P02358 | 41-65 | peptide-Leu61+Met-peptide | N | MS | His | Tyr | Val | Leu | Met | Asn | Val | Glu | Biniossek et al., 2016 | ||
| 30S ribosomal protein S6 | P02358 | 6-16 | peptide-Phe8+Met-peptide | N | MS | Glu | Ile | Val | Phe | Met | Val | His | Pro | Biniossek et al., 2016 | ||
| 30S ribosomal protein S7 | P02359 | 61-63 | peptide-Ala61+Phe-peptide | N | MS | Glu | Leu | Glu | Ala | Phe | Glu | Val | Ala | Biniossek et al., 2016 | ||
| 30S ribosomal protein S7 | P02359 | 61-63 | peptide-Phe62+Glu-peptide | N | MS | Leu | Glu | Ala | Phe | Glu | Val | Ala | Leu | Biniossek et al., 2016 | ||
| 30S ribosomal protein S9 | P0A7X3 | 43-53 | peptide-Met46+Val-peptide | N | MS | Thr | Ala | Arg | Met | Val | Val | Arg | Gln | Biniossek et al., 2016 | ||
| 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase | Q46938 | 113-146 | peptide-Asn129+Cys-peptide | N | MS | Phe | Tyr | Tyr | Asn | Cys | Ala | Pro | Ala | Biniossek et al., 2016 | ||
| 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase | Q46938 | 63-74 | peptide-Leu67+Gly-peptide | N | MS | Gly | Lys | Gln | Leu | Gly | Val | Ser | Tyr | Biniossek et al., 2016 | ||
| 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase | Q46938 | 147-173 | peptide-Asn164+Lys-peptide | N | MS | Arg | Thr | Ile | Asn | Lys | Tyr | Phe | Val | Biniossek et al., 2016 | ||
| 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase | Q46938 | 78-97 | peptide-Gly87+Thr-peptide | N | MS | Gly | Gly | Ala | Gly | Thr | Ile | Thr | Val | Biniossek et al., 2016 | ||
| 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase | P62615 | 222-231 | peptide-Ala224+Val-peptide | N | MS | Glu | Val | Asp | Ala | Val | Leu | Ser | Trp | Biniossek et al., 2016 | ||
| 50S ribosomal protein L1 | P0A7L0 | 109-151 | peptide-Gly135+Leu-peptide | N | MS | Gly | Pro | Arg | Gly | Leu | Met | Pro | Asn | Biniossek et al., 2016 | ||
| 50S ribosomal protein L1 | P0A7L0 | 41-85 | peptide-Ala76+Val-peptide | N | MS | Val | Arg | Val | Ala | Val | Phe | Thr | Gln | Biniossek et al., 2016 | ||
| 50S ribosomal protein L1 | P0A7L0 | 109-151 | peptide-Gly143+Thr-peptide | N | MS | Pro | Lys | Val | Gly | Thr | Val | Thr | Pro | Biniossek et al., 2016 | ||
| 50S ribosomal protein L10 | P0A7J3 | 117-133 | peptide-Ala127+Thr-peptide | N | MS | Asp | Arg | Leu | Ala | Thr | Leu | Pro | Thr | Biniossek et al., 2016 | ||
| 50S ribosomal protein L13 | P0AA10 | 44-90 | peptide-Tyr53+Ile-peptide | N | MS | Thr | Gly | Asp | Tyr | Ile | Ile | Val | Leu | Biniossek et al., 2016 | ||
| 50S ribosomal protein L13 | P0AA10 | 44-90 | peptide-Leu57+Asn-peptide | N | MS | Ile | Ile | Val | Leu | Asn | Ala | Asp | Lys | Biniossek et al., 2016 | ||
| 50S ribosomal protein L14 | P0ADY3 | 46-92 | peptide-Ala83+Cys-peptide | N | MS | Asp | Gly | Asn | Ala | Cys | Val | Leu | Leu | Biniossek et al., 2016 | ||
| 50S ribosomal protein L15 | P02413 | 87-106 | peptide-Ala97+Ala-peptide | N | MS | Thr | Leu | Lys | Ala | Ala | Asn | Ile | Ile | Biniossek et al., 2016 | ||
| 50S ribosomal protein L15 | P02413 | 87-106 | peptide-Ala98+Asn-peptide | N | MS | Leu | Lys | Ala | Ala | Asn | Ile | Ile | Gly | Biniossek et al., 2016 | ||
| 50S ribosomal protein L16 | P0ADY7 | 91-104 | peptide-Tyr91+Trp-peptide | N | MS | Asn | Val | Glu | Tyr | Trp | Val | Ala | Leu | Biniossek et al., 2016 | ||
| 50S ribosomal protein L17 | P0AG44 | 50-74 | peptide-Ala55+Lys-peptide | N | MS | Ile | Thr | Leu | Ala | Lys | Thr | Asp | Ser | Biniossek et al., 2016 | ||
| 50S ribosomal protein L18 | P0C018 | 61-80 | peptide-Asp69+Ala-peptide | N | MS | Gly | Asn | Lys | Asp | Ala | Ala | Ala | Ala | Biniossek et al., 2016 | ||
| 50S ribosomal protein L18 | P0C018 | 85-112 | peptide-Gly96+Phe-peptide | N | MS | Asp | Arg | Ser | Gly | Phe | Gln | Tyr | His | Biniossek et al., 2016 | ||
| 50S ribosomal protein L18 | P0C018 | 61-80 | peptide-Ala70+Ala-peptide | N | MS | Asn | Lys | Asp | Ala | Ala | Ala | Ala | Val | Biniossek et al., 2016 | ||
| 50S ribosomal protein L18 | P0C018 | 85-112 | peptide-Gly101+Arg-peptide | N | MS | Gln | Tyr | His | Gly | Arg | Val | Gln | Ala | Biniossek et al., 2016 | ||
| 50S ribosomal protein L2 | P60422 | 101-145 | peptide-Met132+Arg-peptide | N | MS | Thr | Leu | Pro | Met | Arg | Asn | Ile | Pro | Biniossek et al., 2016 | ||
| 50S ribosomal protein L2 | P60422 | 200-236 | peptide-Gly222+Thr-peptide | N | MS | Thr | Val | Arg | Gly | Thr | Ala | Met | Asn | Biniossek et al., 2016 | ||
| 50S ribosomal protein L2 | P60422 | 200-236 | peptide-Ala224+Met-peptide | N | MS | Arg | Gly | Thr | Ala | Met | Asn | Pro | Val | Biniossek et al., 2016 | ||
| 50S ribosomal protein L2 | P60422 | 1-23 | peptide-His15+Val-peptide | N | MS | Gly | Arg | Arg | His | Val | Val | Lys | Val | Biniossek et al., 2016 | ||
| 50S ribosomal protein L2 | P60422 | 1-23 | peptide-Gly12+Arg-peptide | N | MS | Thr | Ser | Pro | Gly | Arg | Arg | His | Val | Biniossek et al., 2016 | ||
| 50S ribosomal protein L23 | P0ADZ0 | 26-42 | peptide-Leu32+Lys-peptide | N | MS | Thr | Ile | Val | Leu | Lys | Val | Ala | Lys | Biniossek et al., 2016 | ||
| 50S ribosomal protein L24 | P60624 | 38-60 | peptide-Ala51+Leu-peptide | N | MS | Pro | Val | Pro | Ala | Leu | Asn | Gln | Pro | Biniossek et al., 2016 | ||
| 50S ribosomal protein L24 | P60624 | 63-88 | peptide-Ala71+Ile-peptide | N | MS | Ser | Asn | Val | Ala | Ile | Phe | Asn | Ala | Biniossek et al., 2016 | ||
| 50S ribosomal protein L25 | P68919 | 42-55 | peptide-Met48+Asn-peptide | N | MS | Asp | Lys | Val | Met | Asn | Met | Gln | Ala | Biniossek et al., 2016 | ||
| 50S ribosomal protein L3 | P60438 | 31-64 | peptide-Ala47+Ile-peptide | N | MS | Gly | Tyr | Arg | Ala | Ile | Gln | Val | Thr | Biniossek et al., 2016 | ||
| 50S ribosomal protein L3 glutamine methyltransferase | P39199 | 45-61 | peptide-Leu48+Val-peptide | N | MS | Ala | Val | Gln | Leu | Val | Leu | Pro | Ser | Biniossek et al., 2016 | ||
| 50S ribosomal protein L4 | P60723 | 52-111 | peptide-Gly103+Ala-peptide | N | MS | Met | Tyr | Arg | Gly | Ala | Leu | Lys | Ser | Biniossek et al., 2016 | ||
| 50S ribosomal protein L6 | P0AG55 | 131-155 | peptide-Gly142+Gln-peptide | N | MS | Gln | Val | Ile | Gly | Gln | Val | Ala | Ala | Biniossek et al., 2016 | ||
| 50S ribosomal protein L6 | P0AG55 | 82-124 | peptide-Gly100+Asn-peptide | N | MS | Ala | Val | Lys | Gly | Asn | Val | Ile | Asn | Biniossek et al., 2016 | ||
| 50S ribosomal protein L6 | P0AG55 | 1-32 | peptide-Gly21+Gln-peptide | N | MS | Lys | Ile | Asn | Gly | Gln | Val | Ile | Thr | Biniossek et al., 2016 | ||
| 50S ribosomal protein L6 | P0AG55 | 82-124 | peptide-Leu105+Ser-peptide | N | MS | Val | Ile | Asn | Leu | Ser | Leu | Gly | Phe | Biniossek et al., 2016 | ||
| 50S ribosomal protein L6 | P0AG55 | 43-81 | peptide-Ala65+Gly-peptide | N | MS | Trp | Ala | Gln | Ala | Gly | Thr | Ala | Arg | Biniossek et al., 2016 | ||
| 50S ribosomal protein L6 | P0AG55 | 43-81 | peptide-Ser74+Met-peptide | N | MS | Leu | Leu | Asn | Ser | Met | Val | Ile | Gly | Biniossek et al., 2016 | ||
| 50S ribosomal protein L7/L12 | P0A7K2 | 11-22 | peptide-Ala13+Ala-peptide | N | MS | Glu | Ala | Val | Ala | Ala | Met | Ser | Val | Biniossek et al., 2016 | ||
| 50S ribosomal protein L7/L12 | P0A7K2 | 55-83 | peptide-Ala68+Val-peptide | N | MS | Asn | Lys | Val | Ala | Val | Ile | Lys | Ala | Biniossek et al., 2016 | ||
| 50S ribosomal protein L7/L12 | P0A7K2 | 55-83 | peptide-Ala61+Ala-peptide | N | MS | Ile | Leu | Lys | Ala | Ala | Gly | Ala | Asn | Biniossek et al., 2016 | ||
| 50S ribosomal protein L7/L12 | P0A7K2 | 11-22 | peptide-Met15+Ser-peptide | N | MS | Val | Ala | Ala | Met | Ser | Val | Met | Asp | Biniossek et al., 2016 | ||
| 50S ribosomal protein L7/L12 | P0A7K2 | 11-22 | peptide-Ala14+Met-peptide | N | MS | Ala | Val | Ala | Ala | Met | Ser | Val | Met | Biniossek et al., 2016 | ||
| 50S ribosomal protein L7/L12 | P0A7K2 | 55-83 | peptide-Ala64+Asn-peptide | N | MS | Ala | Ala | Gly | Ala | Asn | Lys | Val | Ala | Biniossek et al., 2016 | ||
| 50S ribosomal protein L7/L12 | P0A7K2 | 55-83 | peptide-Ala62+Gly-peptide | N | MS | Leu | Lys | Ala | Ala | Gly | Ala | Asn | Lys | Biniossek et al., 2016 | ||
| 50S ribosomal protein L9 | P0A7R1 | 1-45 | peptide-Phe29+Leu-peptide | N | MS | Ala | Arg | Asn | Phe | Leu | Val | Pro | Gln | Biniossek et al., 2016 | ||
| 6,7-dimethyl-8-ribityllumazine synthase | P61714 | 6-32 | peptide-Ala20+Arg-peptide | N | MS | Ile | Thr | Ile | Ala | Arg | Phe | Asn | Asn | Biniossek et al., 2016 | ||
| 6-phosphogluconate dehydrogenase, decarboxylating | P00350 | 119-131 | peptide-Gly124+Thr-peptide | N | MS | Asn | Phe | Ile | Gly | Thr | Gly | Val | Ser | Biniossek et al., 2016 | ||
| 6-phosphogluconate dehydrogenase, decarboxylating | P00350 | 245-256 | peptide-Asp251+Val-peptide | N | MS | Tyr | Leu | Val | Asp | Val | Ile | Leu | Asp | Biniossek et al., 2016 | ||
| 6-phosphogluconate dehydrogenase, decarboxylating | P00350 | 42-45 | peptide-Ala44+Glu-peptide | N | MS | Glu | Val | Ile | Ala | Glu | Asn | Pro | Gly | Biniossek et al., 2016 | ||
| 6-phosphogluconate dehydrogenase, decarboxylating | P00350 | 200-213 | peptide-Leu203+Leu-peptide | N | MS | Ala | Tyr | Ser | Leu | Leu | Lys | Gly | Gly | Biniossek et al., 2016 | ||
| 6-phosphogluconate dehydrogenase, decarboxylating | P00350 | 151-164 | peptide-Thr157+Lys-peptide | N | MS | Pro | Ile | Leu | Thr | Lys | Ile | Ala | Ala | Biniossek et al., 2016 | ||
| 6-phosphogluconate dehydrogenase, decarboxylating | P00350 | 151-164 | peptide-Ala160+Ala-peptide | N | MS | Thr | Lys | Ile | Ala | Ala | Val | Ala | Glu | Biniossek et al., 2016 | ||
| 6-phosphogluconolactonase | P52697 | 78-112 | peptide-Gly99+Ser-peptide | N | MS | Val | Phe | Val | Gly | Ser | Tyr | Asn | Ala | Biniossek et al., 2016 | ||
| 6-phosphogluconolactonase | P52697 | 58-77 | peptide-Ala62+Tyr-peptide | N | MS | Arg | Val | Leu | Ala | Tyr | Arg | Ile | Ala | Biniossek et al., 2016 | ||
| 60 kDa chaperonin | P0A6F5 | 256-257 | peptide-Gly256+Glu-peptide | N | MS | Asp | Val | Glu | Gly | Glu | Ala | Leu | Ala | Biniossek et al., 2016 | ||
| 60 kDa chaperonin | P0A6F5 | 462-483 | peptide-Ala466+Asn-peptide | N | MS | Ser | Val | Val | Ala | Asn | Thr | Val | Lys | Biniossek et al., 2016 | ||
| 60 kDa chaperonin | P0A6F5 | 239-252 | peptide-Ala243+Gly-peptide | N | MS | Val | Ala | Lys | Ala | Gly | Lys | Pro | Leu | Biniossek et al., 2016 | ||
| 60 kDa chaperonin | P0A6F5 | 131-156 | peptide-Ala143+Ile-peptide | N | MS | Asp | Ser | Lys | Ala | Ile | Ala | Gln | Val | Biniossek et al., 2016 | ||
| 60 kDa chaperonin | P0A6F5 | 410-434 | peptide-Ser424+Lys-peptide | N | MS | Arg | Val | Ala | Ser | Lys | Leu | Ala | Asp | Biniossek et al., 2016 | ||
| 60 kDa chaperonin | P0A6F5 | 217-232 | peptide-Leu221+Leu-peptide | N | MS | Pro | Phe | Ile | Leu | Leu | Ala | Asp | Lys | Biniossek et al., 2016 | ||
| 60 kDa chaperonin | P0A6F5 | 340-354 | peptide-Gly344+Arg-peptide | N | MS | Ala | Ile | Gln | Gly | Arg | Val | Ala | Gln | Biniossek et al., 2016 | ||
| 60 kDa chaperonin | P0A6F5 | 77-102 | peptide-Ala98+Ile-peptide | N | MS | Leu | Ala | Gln | Ala | Ile | Ile | Thr | Glu | Biniossek et al., 2016 | ||
| 60 kDa chaperonin | P0A6F5 | 77-102 | peptide-Ala92+Thr-peptide | N | MS | Thr | Thr | Thr | Ala | Thr | Val | Leu | Ala | Biniossek et al., 2016 | ||
| 60 kDa chaperonin | P0A6F5 | 192-209 | peptide-Gly198+Tyr-peptide | N | MS | Phe | Asp | Arg | Gly | Tyr | Leu | Ser | Pro | Biniossek et al., 2016 | ||
| 60 kDa chaperonin | P0A6F5 | 217-232 | peptide-Ala223+Asp-peptide | N | MS | Ile | Leu | Leu | Ala | Asp | Lys | Lys | Ile | Biniossek et al., 2016 | ||
| 60 kDa chaperonin | P0A6F5 | 131-156 | peptide-Ala145+Gln-peptide | N | MS | Lys | Ala | Ile | Ala | Gln | Val | Gly | Thr | Biniossek et al., 2016 | ||
| Acetate kinase | P0A6A3 | 29-35 | peptide-Gly32+Leu-peptide | N | MS | Tyr | Leu | Ser | Gly | Leu | Ala | Glu | Cys | Biniossek et al., 2016 | ||
| Acetate kinase | P0A6A3 | 108-132 | peptide-Ser118+Phe-peptide | N | MS | Asp | Ala | Ala | Ser | Phe | Ala | Pro | Leu | Biniossek et al., 2016 | ||
| Acetate kinase | P0A6A3 | 108-132 | peptide-Ala117+Ser-peptide | N | MS | Lys | Asp | Ala | Ala | Ser | Phe | Ala | Pro | Biniossek et al., 2016 | ||
| Acetate kinase | P0A6A3 | 66-80 | peptide-Ala76+Gln-peptide | N | MS | Thr | Ile | Leu | Ala | Gln | Lys | Pro | Glu | Biniossek et al., 2016 | ||
| Acetyl-coenzyme A synthetase | P27550 | 545-569 | peptide-Ala561+Tyr-peptide | N | MS | Ala | Ile | Tyr | Ala | Tyr | Val | Thr | Leu | Biniossek et al., 2016 | ||
| Acid stress chaperone HdeA | P0AES9 | 41-47 | peptide-Phe42+Leu-peptide | N | MS | Cys | Glu | Asp | Phe | Leu | Ala | Val | Asp | Biniossek et al., 2016 | ||
| Acid stress chaperone HdeA | P0AES9 | 68-102 | peptide-Ala93+Asn-peptide | N | MS | Asp | Lys | Gln | Ala | Asn | Phe | Lys | Asp | Biniossek et al., 2016 | ||
| Acid stress chaperone HdeA | P0AES9 | 48-58 | peptide-Gly55+Phe-peptide | N | MS | Thr | Ala | Val | Gly | Phe | Ala | Glu | Ala | Biniossek et al., 2016 | ||
| Acid stress chaperone HdeB | P0AET2 | 42-60 | peptide-Ala49+Met-peptide | N | MS | Asn | Pro | Lys | Ala | Met | Thr | Pro | Val | Biniossek et al., 2016 | ||
| Acidic protein MsyB | P25738 | 29-52 | peptide-Ala37+Gln-peptide | N | MS | Gln | Phe | Asn | Ala | Gln | Lys | Tyr | Val | Biniossek et al., 2016 | ||
| Aconitate hydratase B | P36683 | 766-809 | peptide-Phe804+Leu-peptide | N | MS | Ala | Asn | Val | Phe | Leu | Ala | Ser | Ala | Biniossek et al., 2016 | ||
| Aconitate hydratase B | P36683 | 89-133 | peptide-Leu123+Leu-peptide | N | MS | Ser | His | Thr | Leu | Leu | Met | Phe | Asp | Biniossek et al., 2016 | ||
| Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase | P0A722 | 1-15 | peptide-Ala6+Phe-peptide | N | MS | Asp | Lys | Ser | Ala | Phe | Val | His | Pro | Biniossek et al., 2016 | ||
| Adenine phosphoribosyltransferase | P69503 | 149-164 | peptide-Phe154+Ile-peptide | N | MS | Asp | Ala | Ala | Phe | Ile | Ile | Asn | Leu | Biniossek et al., 2016 | ||
| Adenosine deaminase | P22333 | 269-290 | peptide-Ala273+Ser-peptide | N | MS | Gly | Ile | Arg | Ala | Ser | Ile | Asn | Thr | Biniossek et al., 2016 | ||
| Adenylate kinase | P69441 | 115-143 | peptide-Gly130+Arg-peptide | N | MS | Ala | Pro | Ser | Gly | Arg | Val | Tyr | His | Biniossek et al., 2016 | ||
| Adenylosuccinate lyase | P0AB89 | 257-292 | peptide-Tyr278+Ile-peptide | N | MS | Val | Trp | Gly | Tyr | Ile | Ala | Leu | Asn | Biniossek et al., 2016 | ||
| Adenylosuccinate synthetase | P0A7D4 | 382-404 | peptide-Ala395+Ala-peptide | N | MS | Leu | Pro | Gln | Ala | Ala | Leu | Asn | Tyr | Biniossek et al., 2016 | ||
| Adenylosuccinate synthetase | P0A7D4 | 223-282 | peptide-Gly247+Gly-peptide | N | MS | Thr | Thr | Ala | Gly | Gly | Val | Ala | Thr | Biniossek et al., 2016 | ||
| Adenylosuccinate synthetase | P0A7D4 | 223-282 | peptide-Ser241+Ser-peptide | N | MS | Tyr | Val | Thr | Ser | Ser | Asn | Thr | Thr | Biniossek et al., 2016 | ||
| Adenylosuccinate synthetase | P0A7D4 | 168-180 | peptide-Phe171+Gln-peptide | N | MS | Tyr | His | Asn | Phe | Gln | Leu | Val | Asn | Biniossek et al., 2016 | ||
| Aerobic respiration control protein ArcA | P0A9Q1 | 166-174 | peptide-Ala168+Met-peptide | N | MS | Glu | Phe | Arg | Ala | Met | Leu | His | Phe | Biniossek et al., 2016 | ||
| Alanine--tRNA ligase | P00957 | 243-304 | peptide-Phe293+Leu-peptide | N | MS | Ser | Cys | Ala | Phe | Leu | Ile | Ala | Asp | Biniossek et al., 2016 | ||
| Alanine--tRNA ligase | P00957 | 466-488 | peptide-Ala472+Leu-peptide | N | MS | Lys | Val | Thr | Ala | Leu | Phe | Val | Asp | Biniossek et al., 2016 | ||
| Alanine--tRNA ligase | P00957 | 702-716 | peptide-Ala705+Thr-peptide | N | MS | Gly | Ala | Ile | Ala | Thr | Val | His | Ala | Biniossek et al., 2016 | ||
| Alcohol dehydrogenase YqhD | Q46856 | 273-295 | peptide-Leu285+Ala-peptide | N | MS | Ala | Gln | Thr | Leu | Ala | Ile | Val | Leu | Biniossek et al., 2016 | ||
| Alcohol dehydrogenase YqhD | Q46856 | 273-295 | peptide-Ala286+Ile-peptide | N | MS | Gln | Thr | Leu | Ala | Ile | Val | Leu | Pro | Biniossek et al., 2016 | ||
| Aldehyde reductase Ahr | P27250 | 127-140 | peptide-Ala130+Asp-peptide | N | MS | Lys | Leu | Arg | Ala | Asp | Trp | Gln | Trp | Biniossek et al., 2016 | ||
| Aldehyde-alcohol dehydrogenase | P0A9Q7 | 315-322 | peptide-Gly321+Glu-peptide | N | MS | Ile | Leu | Ile | Gly | Glu | Val | Thr | Val | Biniossek et al., 2016 | ||
| Aldehyde-alcohol dehydrogenase | P0A9Q7 | 279-306 | peptide-Ala294+Ala-peptide | N | MS | Ala | Leu | Asn | Ala | Ala | Ile | Val | Gly | Biniossek et al., 2016 | ||
| Alkyl hydroperoxide reductase C | P0AE08 | 21-23 | peptide-Phe21+Ile-peptide | N | MS | Asn | Gly | Glu | Phe | Ile | Glu | Ile | Thr | Biniossek et al., 2016 | ||
| Alkyl hydroperoxide reductase C | P0AE08 | 1-20 | peptide-Gln14+Ala-peptide | N | MS | Phe | Lys | Asn | Gln | Ala | Phe | Lys | Asn | Biniossek et al., 2016 | ||
| Alkyl hydroperoxide reductase C | P0AE08 | 31-50 | peptide-Phe37+Phe-peptide | N | MS | Ser | Val | Phe | Phe | Phe | Tyr | Pro | Ala | Biniossek et al., 2016 | ||
| Alkyl hydroperoxide reductase C | P0AE08 | 88-113 | peptide-Ala103+Leu-peptide | N | MS | Pro | Thr | Gly | Ala | Leu | Thr | Arg | Asn | Biniossek et al., 2016 | ||
| Alkyl hydroperoxide reductase C | P0AE08 | 116-135 | peptide-Ala121+Thr-peptide | N | MS | Ala | Asp | Arg | Ala | Thr | Phe | Val | Val | Biniossek et al., 2016 | ||
| Alkyl hydroperoxide reductase C | P0AE08 | 140-164 | peptide-Ala155+Gln-peptide | N | MS | Ile | Lys | Ala | Ala | Gln | Tyr | Val | Ala | Biniossek et al., 2016 | ||
| Alkyl hydroperoxide reductase C | P0AE08 | 116-135 | peptide-Phe123+Val-peptide | N | MS | Arg | Ala | Thr | Phe | Val | Val | Asp | Pro | Biniossek et al., 2016 | ||
| Alpha-galactosidase | P06720 | 364-401 | peptide-Ala387+Leu-peptide | N | MS | His | Leu | Ala | Ala | Leu | Met | Gln | Thr | Biniossek et al., 2016 | ||
| Amidophosphoribosyltransferase | P0AG16 | 86-110 | peptide-Leu99+Ala-peptide | N | MS | Gly | Ile | Thr | Leu | Ala | His | Asn | Gly | Biniossek et al., 2016 | ||
| Aminomethyltransferase | P27248 | 243-258 | peptide-Met251+Gly-peptide | N | MS | Ala | Ala | Asn | Met | Gly | Trp | Thr | Ile | Biniossek et al., 2016 | ||
| Aminomethyltransferase | P27248 | 243-258 | peptide-Ala249+Asn-peptide | N | MS | Pro | Leu | Ala | Ala | Asn | Met | Gly | Trp | Biniossek et al., 2016 | ||
| Aminopeptidase N | P04825 | 460-477 | peptide-Leu463+Thr-peptide | N | MS | Gln | Tyr | Thr | Leu | Thr | Ile | Ser | Gln | Biniossek et al., 2016 | ||
| Aminopeptidase N | P04825 | 494-516 | peptide-Ser508+Val-peptide | N | MS | Pro | Val | Asn | Ser | Val | Leu | Asn | Val | Biniossek et al., 2016 | ||
| Anaerobic glycerol-3-phosphate dehydrogenase subunit A | P0A9C0 | 523-535 | peptide-Gly530+Leu-peptide | N | MS | Val | Tyr | Gln | Gly | Leu | Cys | Gly | Leu | Biniossek et al., 2016 | ||
| Anaerobic glycerol-3-phosphate dehydrogenase subunit A | P0A9C0 | 181-196 | peptide-Gly186+Val-peptide | N | MS | Thr | Val | Cys | Gly | Val | Arg | Val | Arg | Biniossek et al., 2016 | ||
| Anaerobic glycerol-3-phosphate dehydrogenase subunit B | P13033 | 344-364 | peptide-Gly347+Asp-peptide | N | MS | Trp | Tyr | Lys | Gly | Asp | Phe | Phe | Ala | Biniossek et al., 2016 | ||
| Anti-adapter protein IraP | P0AAN9 | 31-53 | peptide-Gln45+Gln-peptide | N | MS | Gln | Asn | Asp | Gln | Gln | Arg | Leu | Ile | Biniossek et al., 2016 | ||
| Arginine ABC transporter permease protein ArtM | P0AE30 | 173-212 | peptide-Leu204+Thr-peptide | N | MS | Asn | Gly | Leu | Leu | Thr | Leu | Met | Met | Biniossek et al., 2016 | ||
| Arginine--tRNA ligase | P11875 | 77-94 | peptide-Gly81+Phe-peptide | N | MS | Ala | Gly | Pro | Gly | Phe | Ile | Asn | Ile | Biniossek et al., 2016 | ||
| Aromatic-amino-acid aminotransferase | P04693 | 1-18 | peptide-Ala7+Tyr-peptide | N | MS | Lys | Val | Asp | Ala | Tyr | Ala | Gly | Asp | Biniossek et al., 2016 | ||
| Asparagine synthetase B [glutamine-hydrolyzing] | P22106 | 263-286 | peptide-Ser270+Phe-peptide | N | MS | Gln | Leu | His | Ser | Phe | Ala | Val | Gly | Biniossek et al., 2016 | ||
| Asparagine--tRNA ligase | P0A8M0 | 64-91 | peptide-Gly78+Lys-peptide | N | MS | Ile | Val | Thr | Gly | Lys | Val | Val | Ala | Biniossek et al., 2016 | ||
| Aspartate ammonia-lyase | P0AC38 | 366-374 | peptide-Gly369+Gln-peptide | N | MS | Pro | Val | Ile | Gly | Gln | Ala | Met | Phe | Biniossek et al., 2016 | ||
| Aspartate ammonia-lyase | P0AC38 | 317-334 | peptide-Ala319+Gly-peptide | N | MS | Glu | Leu | Gln | Ala | Gly | Ser | Ser | Ile | Biniossek et al., 2016 | ||
| Aspartate ammonia-lyase | P0AC38 | 453-475 | peptide-Leu462+Met-peptide | N | MS | Val | Gln | Asn | Leu | Met | His | Pro | Ala | Biniossek et al., 2016 | ||
| Aspartate ammonia-lyase | P0AC38 | 33-46 | peptide-Ser37+Asn-peptide | N | MS | Phe | Tyr | Ile | Ser | Asn | Asn | Lys | Ile | Biniossek et al., 2016 | ||
| Aspartate ammonia-lyase | P0AC38 | 356-365 | peptide-Leu359+Gln-peptide | N | MS | Ala | Gly | Gln | Leu | Gln | Leu | Asn | Val | Biniossek et al., 2016 | ||
| Aspartate ammonia-lyase | P0AC38 | 375-388 | peptide-Ala382+Cys-peptide | N | MS | Leu | Thr | Asn | Ala | Cys | Tyr | Asn | Leu | Biniossek et al., 2016 | ||
| Aspartate ammonia-lyase | P0AC38 | 17-32 | peptide-Ala21+Tyr-peptide | N | MS | Pro | Ala | Asp | Ala | Tyr | Tyr | Gly | Val | Biniossek et al., 2016 | ||
| Aspartate ammonia-lyase | P0AC38 | 204-213 | peptide-Ala206+Phe-peptide | N | MS | Glu | Phe | Arg | Ala | Phe | Ser | Ile | Leu | Biniossek et al., 2016 | ||
| Aspartate--ammonia ligase | P00963 | 32-52 | peptide-Ser38+Arg-peptide | N | MS | Pro | Ile | Leu | Ser | Arg | Val | Gly | Asp | Biniossek et al., 2016 | ||
| Aspartate--tRNA ligase | P21889 | 304-336 | peptide-Phe304+Ala-peptide | N | MS | Ser | Val | Glu | Phe | Ala | Val | Phe | Ala | Biniossek et al., 2016 | ||
| Aspartate--tRNA ligase | P21889 | 483-507 | peptide-Met495+Gln-peptide | N | MS | Asn | Gly | Asp | Met | Gln | Gln | Thr | Val | Biniossek et al., 2016 | ||
| Aspartate--tRNA ligase | P21889 | 483-507 | peptide-Gln497+Thr-peptide | N | MS | Asp | Met | Gln | Gln | Thr | Val | Phe | Gly | Biniossek et al., 2016 | ||
| ATP synthase epsilon chain | P0A6E6 | 33-60 | peptide-Ala45+Ile-peptide | N | MS | Leu | Leu | Thr | Ala | Ile | Lys | Pro | Gly | Biniossek et al., 2016 | ||
| ATP synthase subunit alpha | P0ABB0 | 332-356 | peptide-Ala339+Phe-peptide | N | MS | Asp | Val | Ser | Ala | Phe | Val | Pro | Thr | Biniossek et al., 2016 | ||
| ATP synthase subunit alpha | P0ABB0 | 139-165 | peptide-Ser155+Met-peptide | N | MS | Ala | Val | Asp | Ser | Met | Ile | Pro | Ile | Biniossek et al., 2016 | ||
| ATP synthase subunit beta | P0ABB4 | 1-17 | peptide-Gly11+Ala-peptide | N | MS | Gln | Val | Ile | Gly | Ala | Val | Val | Asp | Biniossek et al., 2016 | ||
| ATP synthase subunit beta | P0ABB4 | 107-118 | peptide-Ala109+Ile-peptide | N | MS | Glu | Arg | Trp | Ala | Ile | His | Arg | Ala | Biniossek et al., 2016 | ||
| ATP synthase subunit beta | P0ABB4 | 282-353 | peptide-Ser328+Leu-peptide | N | MS | Gln | Ile | Ala | Ser | Leu | Gly | Ile | Tyr | Biniossek et al., 2016 | ||
| ATP synthase subunit beta | P0ABB4 | 213-229 | peptide-Ala221+Leu-peptide | N | MS | Leu | Arg | Val | Ala | Leu | Thr | Gly | Leu | Biniossek et al., 2016 | ||
| ATP synthase subunit beta | P0ABB4 | 387-409 | peptide-Ser402+Gln-peptide | N | MS | Arg | Phe | Leu | Ser | Gln | Pro | Phe | Phe | Biniossek et al., 2016 | ||
| ATP synthase subunit beta | P0ABB4 | 255-274 | peptide-Gly260+Arg-peptide | N | MS | Ala | Leu | Leu | Gly | Arg | Met | Pro | Ser | Biniossek et al., 2016 | ||
| ATP synthase subunit beta | P0ABB4 | 43-73 | peptide-Ala56+Met-peptide | N | MS | Arg | Thr | Ile | Ala | Met | Gly | Ser | Ser | Biniossek et al., 2016 | ||
| ATP synthase subunit delta | P0ABA4 | 95-104 | peptide-Ala101+Val-peptide | N | MS | His | Leu | Arg | Ala | Val | Ser | Glu | Ala | Biniossek et al., 2016 | ||
| ATP-dependent Clp protease ATP-binding subunit ClpX | P0A6H1 | 329-344 | peptide-Ala332+Leu-peptide | N | MS | Pro | Lys | Asn | Ala | Leu | Thr | Lys | Gln | Biniossek et al., 2016 | ||
| ATP-dependent Clp protease ATP-binding subunit ClpX | P0A6H1 | 160-185 | peptide-Leu166+Gln-peptide | N | MS | Gln | Lys | Leu | Leu | Gln | Lys | Cys | Asp | Biniossek et al., 2016 | ||
| ATP-dependent protease ATPase subunit HslU | P0A6H5 | 48-65 | peptide-Met55+Ile-peptide | N | MS | Asn | Ile | Leu | Met | Ile | Gly | Pro | Thr | Biniossek et al., 2016 | ||
| ATP-dependent protease ATPase subunit HslU | P0A6H5 | 152-165 | peptide-Ala158+Phe-peptide | N | MS | Ala | Arg | Gln | Ala | Phe | Arg | Lys | Lys | Biniossek et al., 2016 | ||
| Autonomous glycyl radical cofactor | P68066 | 1-25 | peptide-Lys9+Ala-peptide | N | MS | Gln | Ile | Thr | Lys | Ala | Ala | Asn | Asp | Biniossek et al., 2016 | ||
| Autonomous glycyl radical cofactor | P68066 | 1-25 | peptide-Ala10+Ala-peptide | N | MS | Ile | Thr | Lys | Ala | Ala | Asn | Asp | Asp | Biniossek et al., 2016 | ||
| Autonomous glycyl radical cofactor | P68066 | 1-25 | peptide-Ala11+Asn-peptide | N | MS | Thr | Lys | Ala | Ala | Asn | Asp | Asp | Leu | Biniossek et al., 2016 | ||
| Autonomous glycyl radical cofactor | P68066 | 1-25 | peptide-Ile7+Thr-peptide | N | MS | Gly | Ile | Gln | Ile | Thr | Lys | Ala | Ala | Biniossek et al., 2016 | ||
| Autonomous glycyl radical cofactor | P68066 | 69-81 | peptide-Leu73+Asn-peptide | N | MS | Gly | Gln | His | Leu | Asn | Val | Asn | Val | Biniossek et al., 2016 | ||
| Beta-galactosidase | P00722 | 463-488 | peptide-Ile476+Lys-peptide | N | MS | Tyr | Arg | Trp | Ile | Lys | Ser | Val | Asp | Biniossek et al., 2016 | ||
| Betaine aldehyde dehydrogenase | P17445 | 125-132 | peptide-Ser126+Gln-peptide | N | MS | Leu | Glu | Gly | Ser | Gln | Ile | Pro | Leu | Biniossek et al., 2016 | ||
| Bifunctional glutathionylspermidine synthetase/amidase | P0AES0 | 93-125 | peptide-Arg110+Ala-peptide | N | MS | Gly | Ser | Pro | Arg | Ala | Pro | Val | Ala | Biniossek et al., 2016 | ||
| Bifunctional purine biosynthesis protein PurH | P15639 | 93-115 | peptide-Met100+Val-peptide | N | MS | Pro | Ile | Asp | Met | Val | Val | Val | Asn | Biniossek et al., 2016 | ||
| Bifunctional purine biosynthesis protein PurH | P15639 | 125-159 | peptide-Ala137+Ala-peptide | N | MS | Val | Arg | Ser | Ala | Ala | Lys | Asn | His | Biniossek et al., 2016 | ||
| Bifunctional purine biosynthesis protein PurH | P15639 | 63-91 | peptide-Gly81+Arg-peptide | N | MS | Gly | Ile | Leu | Gly | Arg | Arg | Gly | Gln | Biniossek et al., 2016 | ||
| Bifunctional purine biosynthesis protein PurH | P15639 | 247-273 | peptide-Gly257+Lys-peptide | N | MS | Gln | Val | Gln | Gly | Lys | Ala | Leu | Ser | Biniossek et al., 2016 | ||
| Biotin carboxyl carrier protein of acetyl-CoA carboxylase | P0ABD8 | 29-71 | peptide-Ala39+Ser-peptide | N | MS | Ala | Pro | Ala | Ala | Ser | Phe | Pro | Val | Biniossek et al., 2016 | ||
| Biotin carboxylase | P24182 | 48-71 | peptide-Ser59+Tyr-peptide | N | MS | Ser | Val | Lys | Ser | Tyr | Leu | Asn | Ile | Biniossek et al., 2016 | ||
| Carbamoyl-phosphate synthase large chain | P00968 | 479-510 | peptide-Ala486+Asp-peptide | N | MS | Gly | Leu | Asn | Ala | Asp | Phe | Leu | Arg | Biniossek et al., 2016 | ||
| Carbon storage regulator | P69913 | 18-39 | peptide-Val30+Arg-peptide | N | MS | Gly | Asn | Gln | Val | Arg | Ile | Gly | Val | Biniossek et al., 2016 | ||
| Catalase-peroxidase | P13029 | 574-592 | peptide-Ala584+Arg-peptide | N | MS | Asn | Tyr | Arg | Ala | Arg | Leu | Asp | Val | Biniossek et al., 2016 | ||
| Cell division protein FtsZ | P0A9A6 | 277-305 | peptide-Ala290+Thr-peptide | N | MS | Ser | Asp | Asn | Ala | Thr | Val | Val | Ile | Biniossek et al., 2016 | ||
| Cell shape-determining protein MreB | P0A9X4 | 263-276 | peptide-Gly266+Ile-peptide | N | MS | Pro | Leu | Thr | Gly | Ile | Val | Ser | Ala | Biniossek et al., 2016 | ||
| Cell shape-determining protein MreB | P0A9X4 | 263-276 | peptide-Ser269+Ala-peptide | N | MS | Gly | Ile | Val | Ser | Ala | Val | Met | Val | Biniossek et al., 2016 | ||
| Cellulose synthase operon protein C | P37650 | 216-260 | peptide-Val235+Ser-peptide | N | MS | Asp | Ala | Ser | Val | Ser | Ala | Leu | Lys | Biniossek et al., 2016 | ||
| Chaperone protein ClpB | P63284 | 740-752 | peptide-Leu742+Gly-peptide | N | MS | Glu | Leu | Val | Leu | Gly | Val | Val | Ser | Biniossek et al., 2016 | ||
| Chaperone protein ClpB | P63284 | 806-826 | peptide-Ala820+Ile-peptide | N | MS | Leu | Lys | Arg | Ala | Ile | Gln | Gln | Gln | Biniossek et al., 2016 | ||
| Chaperone protein ClpB | P63284 | 614-627 | peptide-Ala617+Leu-peptide | N | MS | Leu | Cys | Lys | Ala | Leu | Ala | Asn | Phe | Biniossek et al., 2016 | ||
| Chaperone protein ClpB | P63284 | 640-657 | peptide-Ser642+Val-peptide | N | MS | Glu | Lys | His | Ser | Val | Ser | Arg | Leu | Biniossek et al., 2016 | ||
| Chaperone protein DnaK | P0A6Y8 | 32-47 | peptide-Ala41+Tyr-peptide | N | MS | Ser | Ile | Ile | Ala | Tyr | Thr | Gln | Asp | Biniossek et al., 2016 | ||
| Chaperone protein DnaK | P0A6Y8 | 532-551 | peptide-Gln538+Gly-peptide | N | MS | Thr | Arg | Asn | Gln | Gly | Asp | His | Leu | Biniossek et al., 2016 | ||
| Chaperone protein DnaK | P0A6Y8 | 244-264 | peptide-Gln248+Gly-peptide | N | MS | Lys | Lys | Asp | Gln | Gly | Ile | Asp | Leu | Biniossek et al., 2016 | ||
| Chaperone protein DnaK | P0A6Y8 | 119-128 | peptide-Met123+Lys-peptide | N | MS | Leu | Lys | Lys | Met | Lys | Lys | Thr | Ala | Biniossek et al., 2016 | ||
| Chaperone protein DnaK | P0A6Y8 | 445-473 | peptide-Gly455+Gln-peptide | N | MS | Lys | Ser | Leu | Gly | Gln | Phe | Asn | Leu | Biniossek et al., 2016 | ||
| Chaperone protein DnaK | P0A6Y8 | 105-118 | peptide-Gly107+Gln-peptide | N | MS | Glu | Val | Lys | Gly | Gln | Lys | Met | Ala | Biniossek et al., 2016 | ||
| Chaperone protein DnaK | P0A6Y8 | 601-630 | peptide-Ala607+Gln-peptide | N | MS | Gln | Gln | His | Ala | Gln | Gln | Gln | Thr | Biniossek et al., 2016 | ||
| Chaperone protein DnaK | P0A6Y8 | 48-80 | peptide-Ala58+Val-peptide | N | MS | Lys | Arg | Gln | Ala | Val | Thr | Asn | Pro | Biniossek et al., 2016 | ||
| Chaperone protein DnaK | P0A6Y8 | 48-80 | peptide-Gln57+Ala-peptide | N | MS | Ala | Lys | Arg | Gln | Ala | Val | Thr | Asn | Biniossek et al., 2016 | ||
| Chaperone protein DnaK | P0A6Y8 | 172-206 | peptide-Ala176+Leu-peptide | N | MS | Thr | Ala | Ala | Ala | Leu | Ala | Tyr | Gly | Biniossek et al., 2016 | ||
| Chaperone protein DnaK | P0A6Y8 | 105-118 | peptide-Met110+Ala-peptide | N | MS | Gly | Gln | Lys | Met | Ala | Pro | Pro | Gln | Biniossek et al., 2016 | ||
| Chaperone protein HtpG | P0A6Z3 | 592-594 | peptide-Trp592+Val-peptide | N | MS | Phe | Ser | Glu | Trp | Val | Glu | Leu | Leu | Biniossek et al., 2016 | ||
| Chaperone protein HtpG | P0A6Z3 | 506-521 | peptide-Ala517+Leu-peptide | N | MS | Arg | Val | Lys | Ala | Leu | Leu | Gly | Glu | Biniossek et al., 2016 | ||
| Chaperone protein Skp | P0AEU7 | 1-47 | peptide-Gln34+Gln-peptide | N | MS | Ser | Leu | Phe | Gln | Gln | Val | Ala | Gln | Biniossek et al., 2016 | ||
| Citrate synthase | P0ABH7 | 18-54 | peptide-Gly36+Ser-peptide | N | MS | Arg | Thr | Leu | Gly | Ser | Lys | Gly | Val | Biniossek et al., 2016 | ||
| Coenzyme A biosynthesis bifunctional protein CoaBC | P0ABQ0 | 300-330 | peptide-Gly326+Phe-peptide | N | MS | Tyr | Val | Val | Gly | Phe | Ala | Ala | Glu | Biniossek et al., 2016 | ||
| Cold shock-like protein CspC | P0A9Y6 | 14-46 | peptide-Ala35+Ile-peptide | N | MS | His | Phe | Ser | Ala | Ile | Gln | Gly | Asn | Biniossek et al., 2016 | ||
| Cold shock-like protein CspC | P0A9Y6 | 14-46 | peptide-Ser34+Ala-peptide | N | MS | Val | His | Phe | Ser | Ala | Ile | Gln | Gly | Biniossek et al., 2016 | ||
| Cyclic di-GMP phosphodiesterase PdeH | P37646 | 84-97 | peptide-Ala92+Asp-peptide | N | MS | Ala | Gln | Lys | Ala | Asp | Phe | Phe | Ile | Biniossek et al., 2016 | ||
| Cysteine synthase A | P0ABK5 | 305-318 | peptide-Ala310+Leu-peptide | N | MS | Leu | Ser | Thr | Ala | Leu | Phe | Ala | Asp | Biniossek et al., 2016 | ||
| Cysteine synthase A | P0ABK5 | 137-151 | peptide-Leu139+Leu-peptide | N | MS | Glu | Lys | Tyr | Leu | Leu | Leu | Gln | Gln | Biniossek et al., 2016 | ||
| Cytidine deaminase | P0ABF6 | 92-104 | peptide-Gly94+Ala-peptide | N | MS | Glu | Phe | Ile | Gly | Ala | Thr | Met | Gln | Biniossek et al., 2016 | ||
| Cytosol aminopeptidase | P68767 | 108-114 | peptide-Ala108+Val-peptide | N | MS | Ser | Met | Glu | Ala | Val | Cys | Phe | Leu | Biniossek et al., 2016 | ||
| Cytosol non-specific dipeptidase | P15288 | 467-477 | peptide-Leu474+Leu-peptide | N | MS | Tyr | Trp | Thr | Leu | Leu | Thr | Glu | Leu | Biniossek et al., 2016 | ||
| Cytosol non-specific dipeptidase | P15288 | 262-285 | peptide-Ala264+Thr-peptide | N | MS | Glu | Ala | Phe | Ala | Thr | Ile | Ala | Val | Biniossek et al., 2016 | ||
| Cytosol non-specific dipeptidase | P15288 | 262-285 | peptide-Ala267+Val-peptide | N | MS | Ala | Thr | Ile | Ala | Val | Ala | Ala | Asp | Biniossek et al., 2016 | ||
| Cytosol non-specific dipeptidase | P15288 | 444-461 | peptide-Met446+Val-peptide | N | MS | Glu | Met | Asp | Met | Val | Ser | Ile | Gly | Biniossek et al., 2016 | ||
| D-galactose-binding periplasmic protein | P0AEE5 | 49-101 | peptide-Ala85+Leu-peptide | N | MS | Gly | Val | Lys | Ala | Leu | Ala | Ile | Asn | Biniossek et al., 2016 | ||
| D-galactose-binding periplasmic protein | P0AEE5 | 138-172 | peptide-Leu168+Leu-peptide | N | MS | Gln | Phe | Val | Leu | Leu | Lys | Gly | Glu | Biniossek et al., 2016 | ||
| D-galactose-binding periplasmic protein | P0AEE5 | 198-228 | peptide-Ala217+Trp-peptide | N | MS | Lys | Met | Asp | Ala | Trp | Leu | Ser | Gly | Biniossek et al., 2016 | ||
| D-galactose-binding periplasmic protein | P0AEE5 | 117-137 | peptide-Ala128+Tyr-peptide | N | MS | Tyr | Asp | Lys | Ala | Tyr | Tyr | Val | Gly | Biniossek et al., 2016 | ||
| D-galactose-binding periplasmic protein | P0AEE5 | 244-263 | peptide-Ser251+Ser-peptide | N | MS | His | Asn | Lys | Ser | Ser | Ile | Pro | Val | Biniossek et al., 2016 | ||
| D-galactose-binding periplasmic protein | P0AEE5 | 138-172 | peptide-Ala147+Lys-peptide | N | MS | Asp | Leu | Ile | Ala | Lys | His | Trp | Ala | Biniossek et al., 2016 | ||
| D-serine dehydratase | P00926 | 38-46 | peptide-Gly43+Leu-peptide | N | MS | Pro | Tyr | Val | Gly | Leu | Thr | Glu | Gln | Biniossek et al., 2016 | ||
| D-tagatose-1,6-bisphosphate aldolase subunit GatY | P0C8J6 | 235-249 | peptide-Gln241+Ala-peptide | N | MS | Ala | Phe | Ser | Gln | Ala | Leu | Lys | Asn | Biniossek et al., 2016 | ||
| D-tagatose-1,6-bisphosphate aldolase subunit GatY | P0C8J6 | 235-249 | peptide-Ala238+Phe-peptide | N | MS | Leu | Lys | Asn | Ala | Phe | Ser | Gln | Ala | Biniossek et al., 2016 | ||
| D-tagatose-1,6-bisphosphate aldolase subunit GatY | P0C8J6 | 196-234 | peptide-Leu224+Gly-peptide | N | MS | Thr | Ile | Lys | Leu | Gly | Ile | Cys | Lys | Biniossek et al., 2016 | ||
| D-tagatose-1,6-bisphosphate aldolase subunit GatY | P0C8J6 | 37-60 | peptide-Ala48+Gly-peptide | N | MS | Val | Ile | Ile | Ala | Gly | Thr | Pro | Gly | Biniossek et al., 2016 | ||
| D-tagatose-1,6-bisphosphate aldolase subunit GatY | P0C8J6 | 1-29 | peptide-Gly16+Gly-peptide | N | MS | Ala | Gln | Arg | Gly | Gly | Tyr | Ala | Val | Biniossek et al., 2016 | ||
| D-tagatose-1,6-bisphosphate aldolase subunit GatY | P0C8J6 | 235-249 | peptide-Ala242+Leu-peptide | N | MS | Phe | Ser | Gln | Ala | Leu | Lys | Asn | Tyr | Biniossek et al., 2016 | ||
| D-tagatose-1,6-bisphosphate aldolase subunit GatY | P0C8J6 | 253-281 | peptide-Ala263+Lys-peptide | N | MS | Leu | Gln | Ser | Ala | Lys | Ser | Ala | Met | Biniossek et al., 2016 | ||
| D-tagatose-1,6-bisphosphate aldolase subunit GatZ | P0C8J8 | 45-66 | peptide-Gly58+Met-peptide | N | MS | Gly | Tyr | Thr | Gly | Met | Thr | Pro | Ala | Biniossek et al., 2016 | ||
| D-tagatose-1,6-bisphosphate aldolase subunit GatZ | P0C8J8 | 144-153 | peptide-Ala146+Val-peptide | N | MS | Glu | Arg | Ala | Ala | Val | Leu | Cys | Phe | Biniossek et al., 2016 | ||
| D-tagatose-1,6-bisphosphate aldolase subunit GatZ | P0C8J8 | 192-211 | peptide-Ala203+Phe-peptide | N | MS | His | Gln | Lys | Ala | Phe | Ile | Ala | Arg | Biniossek et al., 2016 | ||
| Delta-aminolevulinic acid dehydratase | P0ACB2 | 297-319 | peptide-Tyr312+Phe-peptide | N | MS | Ile | Phe | Ser | Tyr | Phe | Ala | Leu | Asp | Biniossek et al., 2016 | ||
| Deoxyguanosinetriphosphate triphosphohydrolase | P15723 | 441-457 | peptide-Arg452+Leu-peptide | N | MS | Thr | Arg | His | Arg | Leu | Ala | Tyr | Val | Biniossek et al., 2016 | ||
| Deoxyribose-phosphate aldolase | P0A6L0 | 196-210 | peptide-Gly199+Phe-peptide | N | MS | Lys | Thr | Val | Gly | Phe | Lys | Pro | Ala | Biniossek et al., 2016 | ||
| Deoxyribose-phosphate aldolase | P0A6L0 | 222-259 | peptide-Ala230+Arg-peptide | N | MS | Trp | Ala | Asp | Ala | Arg | His | Tyr | Arg | Biniossek et al., 2016 | ||
| Deoxyribose-phosphate aldolase | P0A6L0 | 68-89 | peptide-Ala71+Thr-peptide | N | MS | Ile | Arg | Ile | Ala | Thr | Val | Thr | Asn | Biniossek et al., 2016 | ||
| Dihydrolipoyl dehydrogenase | P0A9P0 | 357-364 | peptide-Ala358+Trp-peptide | N | MS | Pro | Glu | Val | Ala | Trp | Val | Gly | Leu | Biniossek et al., 2016 | ||
| Dihydrolipoyl dehydrogenase | P0A9P0 | 437-450 | peptide-Ala439+Leu-peptide | N | MS | Glu | Asp | Ile | Ala | Leu | Thr | Ile | His | Biniossek et al., 2016 | ||
| Dihydrolipoyl dehydrogenase | P0A9P0 | 177-189 | peptide-Leu178+Leu-peptide | N | MS | Pro | Glu | Arg | Leu | Leu | Val | Met | Gly | Biniossek et al., 2016 | ||
| Dihydrolipoyl dehydrogenase | P0A9P0 | 190-205 | peptide-Ala196+Leu-peptide | N | MS | Val | Tyr | His | Ala | Leu | Gly | Ser | Gln | Biniossek et al., 2016 | ||
| Dihydrolipoyl dehydrogenase | P0A9P0 | 437-450 | peptide-Ala444+His-peptide | N | MS | Thr | Ile | His | Ala | His | Pro | Thr | Leu | Biniossek et al., 2016 | ||
| Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex | P06959 | 261-279 | peptide-Phe278+Glu-peptide | N | MS | Ile | Met | Ile | Phe | Glu | Val | Glu | Gly | Biniossek et al., 2016 | ||
| Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex | P06959 | 484-521 | peptide-Gly497+Val-peptide | N | MS | Ile | Asn | Ile | Gly | Val | Ala | Val | Asp | Biniossek et al., 2016 | ||
| Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex | P06959 | 294-304 | peptide-Ala303+Glu-peptide | N | MS | Ala | Ala | Lys | Ala | Glu | Ala | Pro | Ala | Biniossek et al., 2016 | ||
| Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex | P06959 | 243-249 | peptide-Met248+Glu-peptide | N | MS | Lys | Ala | Ser | Met | Glu | Val | Pro | Ala | Biniossek et al., 2016 | ||
| Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex | P06959 | 543-569 | peptide-Gly554+Gly-peptide | N | MS | Ser | Ser | Ile | Gly | Gly | Leu | Gly | Thr | Biniossek et al., 2016 | ||
| Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex | P06959 | 405-436 | peptide-Val421+Met-peptide | N | MS | Arg | Asn | Trp | Val | Met | Ile | Pro | His | Biniossek et al., 2016 | ||
| Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex | P06959 | 374-399 | peptide-Gly385+Met-peptide | N | MS | Gly | Ile | Pro | Gly | Met | Leu | Pro | Trp | Biniossek et al., 2016 | ||
| Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex | P06959 | 543-569 | peptide-Ser551+Ser-peptide | N | MS | Phe | Thr | Ile | Ser | Ser | Ile | Gly | Gly | Biniossek et al., 2016 | ||
| Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex | P06959 | 282-293 | peptide-Gly282+Ala-peptide | N | MS | Glu | Val | Glu | Gly | Ala | Ala | Pro | Ala | Biniossek et al., 2016 | ||
| Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex | P0AFG6 | 65-79 | peptide-Gly75+Arg-peptide | N | MS | Gln | Ile | Leu | Gly | Arg | Leu | Arg | Glu | Biniossek et al., 2016 | ||
| Dihydroorotase | P05020 | 36-54 | peptide-Ala40+Ile-peptide | N | MS | Tyr | Gly | Arg | Ala | Ile | Val | Met | Pro | Biniossek et al., 2016 | ||
| dITP/XTP pyrophosphatase | P52061 | 105-129 | peptide-Phe118+His-peptide | N | MS | Gln | Ala | Arg | Phe | His | Cys | Val | Leu | Biniossek et al., 2016 | ||
| DNA gyrase subunit B | P0AES6 | 162-174 | peptide-Met166+Val-peptide | N | MS | Thr | Gly | Thr | Met | Val | Arg | Phe | Trp | Biniossek et al., 2016 | ||
| DNA helicase II | P03018 | 70-117 | peptide-His102+Met-peptide | N | MS | Arg | Ala | His | His | Met | Asp | Ala | Asn | Biniossek et al., 2016 | ||
| DNA polymerase I | P00582 | 476-492 | peptide-Gln483+Leu-peptide | N | MS | Gly | Lys | Asn | Gln | Leu | Thr | Phe | Asn | Biniossek et al., 2016 | ||
| DNA protection during starvation protein | P0ABT2 | 83-120 | peptide-Leu109+Asp-peptide | N | MS | Ser | Tyr | Pro | Leu | Asp | Ile | His | Asn | Biniossek et al., 2016 | ||
| DNA protection during starvation protein | P0ABT2 | 121-138 | peptide-Ala126+Ile-peptide | N | MS | Asp | Arg | Tyr | Ala | Ile | Val | Ala | Asn | Biniossek et al., 2016 | ||
| DNA protection during starvation protein | P0ABT2 | 65-82 | peptide-Ala72+Leu-peptide | N | MS | Phe | Arg | Thr | Ala | Leu | Ile | Asp | His | Biniossek et al., 2016 | ||
| DNA protection during starvation protein | P0ABT2 | 1-25 | peptide-Leu14+Leu-peptide | N | MS | Ala | Thr | Asn | Leu | Leu | Tyr | Thr | Arg | Biniossek et al., 2016 | ||
| DNA-binding protein H-NS | P0ACF8 | 75-102 | peptide-Ala81+Val-peptide | N | MS | Ser | Leu | Ala | Ala | Val | Lys | Ser | Gly | Biniossek et al., 2016 | ||
| DNA-binding protein HU-alpha | P0ACF0 | 39-57 | peptide-Gly46+Phe-peptide | N | MS | Gln | Leu | Val | Gly | Phe | Gly | Thr | Phe | Biniossek et al., 2016 | ||
| DNA-binding protein HU-beta | P0ACF4 | 1-34 | peptide-Ala14+Asp-peptide | N | MS | Ala | Ala | Gly | Ala | Asp | Ile | Ser | Lys | Biniossek et al., 2016 | ||
| DNA-directed RNA polymerase subunit alpha | P0A7Z4 | 98-122 | peptide-Ser105+Gly-peptide | N | MS | Leu | Asn | Lys | Ser | Gly | Ile | Gly | Pro | Biniossek et al., 2016 | ||
| DNA-directed RNA polymerase subunit alpha | P0A7Z4 | 81-97 | peptide-Gly87+Leu-peptide | N | MS | Asn | Leu | Lys | Gly | Leu | Ala | Val | Arg | Biniossek et al., 2016 | ||
| DNA-directed RNA polymerase subunit alpha | P0A7Z4 | 18-29 | peptide-Ala24+Lys-peptide | N | MS | Ser | Thr | His | Ala | Lys | Val | Thr | Leu | Biniossek et al., 2016 | ||
| DNA-directed RNA polymerase subunit beta | P0A8V2 | 746-775 | peptide-Ser759+Asn-peptide | N | MS | Tyr | Thr | Arg | Ser | Asn | Gln | Asn | Thr | Biniossek et al., 2016 | ||
| DNA-directed RNA polymerase subunit beta | P0A8V2 | 909-940 | peptide-Gly926+Thr-peptide | N | MS | Gly | Val | Ser | Gly | Thr | Val | Ile | Asp | Biniossek et al., 2016 | ||
| DNA-directed RNA polymerase subunit beta | P0A8V2 | 366-374 | peptide-Met369+Met-peptide | N | MS | Ile | Tyr | Arg | Met | Met | Arg | Pro | Gly | Biniossek et al., 2016 | ||
| DnaA initiator-associating protein DiaA | P66817 | 71-97 | peptide-Ala78+Leu-peptide | N | MS | Pro | Ala | Ile | Ala | Leu | Asn | Thr | Asp | Biniossek et al., 2016 | ||
| dTTP/UTP pyrophosphatase | P25536 | 143-177 | peptide-Ala169+Val-peptide | N | MS | Ser | Tyr | His | Ala | Val | Val | Gly | Leu | Biniossek et al., 2016 | ||
| Elongation factor 4 | P60785 | 587-599 | peptide-Phe588+Leu-peptide | N | MS | Gln | Glu | Ala | Phe | Leu | Ala | Ile | Leu | Biniossek et al., 2016 | ||
| Elongation factor G | P0A6M8 | 690-700 | peptide-Ala697+Val-peptide | N | MS | Val | Ala | Gln | Ala | Val | Ile | Glu | Ala | Biniossek et al., 2016 | ||
| Elongation factor G | P0A6M8 | 536-548 | peptide-Gly542+Gly-peptide | N | MS | Asp | Ile | Lys | Gly | Gly | Val | Ile | Pro | Biniossek et al., 2016 | ||
| Elongation factor G | P0A6M8 | 1-28 | peptide-Ala17+His-peptide | N | MS | Gly | Ile | Ser | Ala | His | Ile | Asp | Ala | Biniossek et al., 2016 | ||
| Elongation factor G | P0A6M8 | 178-203 | peptide-Ala190+Ile-peptide | N | MS | Lys | Met | Lys | Ala | Ile | Asn | Trp | Asn | Biniossek et al., 2016 | ||
| Elongation factor G | P0A6M8 | 178-203 | peptide-Met188+Lys-peptide | N | MS | Leu | Val | Lys | Met | Lys | Ala | Ile | Asn | Biniossek et al., 2016 | ||
| Elongation factor G | P0A6M8 | 101-124 | peptide-Ala115+Val-peptide | N | MS | Val | Tyr | Cys | Ala | Val | Gly | Gly | Val | Biniossek et al., 2016 | ||
| Elongation factor G | P0A6M8 | 377-407 | peptide-Ala384+Ala-peptide | N | MS | Asp | Ile | Ala | Ala | Ala | Ile | Gly | Leu | Biniossek et al., 2016 | ||
| Elongation factor P-like protein | P0A6N8 | 140-168 | peptide-Ala156+Thr-peptide | N | MS | Asn | Lys | Pro | Ala | Thr | Leu | Ser | Thr | Biniossek et al., 2016 | ||
| Elongation factor Ts | P0A6P1 | 238-248 | peptide-Gly243+Gln-peptide | N | MS | Lys | Thr | Val | Gly | Gln | Leu | Leu | Lys | Biniossek et al., 2016 | ||
| Elongation factor Ts | P0A6P1 | 165-179 | peptide-Met171+His-peptide | N | MS | His | Ile | Ala | Met | His | Val | Ala | Ala | Biniossek et al., 2016 | ||
| Elongation factor Tu 1 | P0CE47 | 192-202 | peptide-Leu192+Ala-peptide | N | MS | Ile | Leu | Glu | Leu | Ala | Gly | Phe | Leu | Biniossek et al., 2016 | ||
| Elongation factor Tu 1 | P0CE47 | 70-118 | peptide-Gly101+Ala-peptide | N | MS | Gln | Met | Asp | Gly | Ala | Ile | Leu | Val | Biniossek et al., 2016 | ||
| Elongation factor Tu 1 | P0CE47 | 289-306 | peptide-Leu293+Ala-peptide | N | MS | Gly | Gln | Val | Leu | Ala | Lys | Pro | Gly | Biniossek et al., 2016 | ||
| Elongation factor Tu 1 | P0CE47 | 70-118 | peptide-Ala107+Ala-peptide | N | MS | Leu | Val | Val | Ala | Ala | Thr | Asp | Gly | Biniossek et al., 2016 | ||
| Elongation factor Tu 1 | P0CE47 | 192-202 | peptide-Gly194+Phe-peptide | N | MS | Glu | Leu | Ala | Gly | Phe | Leu | Asp | Ser | Biniossek et al., 2016 | ||
| Elongation factor Tu 1 | P0CE47 | 119-144 | peptide-Val133+Phe-peptide | N | MS | Tyr | Ile | Ile | Val | Phe | Leu | Asn | Lys | Biniossek et al., 2016 | ||
| Elongation factor Tu 1 | P0CE47 | 119-144 | peptide-Val126+Gly-peptide | N | MS | Gly | Arg | Gln | Val | Gly | Val | Pro | Tyr | Biniossek et al., 2016 | ||
| Elongation factor Tu 1 | P0CE47 | 119-144 | peptide-Ile131+Ile-peptide | N | MS | Val | Pro | Tyr | Ile | Ile | Val | Phe | Leu | Biniossek et al., 2016 | ||
| Elongation factor Tu 1 | P0CE47 | 57-69 | peptide-Ser66+His-peptide | N | MS | Ile | Asn | Thr | Ser | His | Val | Glu | Tyr | Biniossek et al., 2016 | ||
| Elongation factor Tu 1 | P0CE47 | 289-306 | peptide-Ala294+Lys-peptide | N | MS | Gln | Val | Leu | Ala | Lys | Pro | Gly | Thr | Biniossek et al., 2016 | ||
| Elongation factor Tu 1 | P0CE47 | 157-180 | peptide-Ala175+Leu-peptide | N | MS | Arg | Gly | Ser | Ala | Leu | Lys | Ala | Leu | Biniossek et al., 2016 | ||
| Elongation factor Tu 1 | P0CE47 | 157-180 | peptide-Gly173+Ser-peptide | N | MS | Ile | Val | Arg | Gly | Ser | Ala | Leu | Lys | Biniossek et al., 2016 | ||
| Elongation factor Tu 1 | P0CE47 | 274-285 | peptide-Gly281+Ile-peptide | N | MS | Leu | Leu | Arg | Gly | Ile | Lys | Arg | Glu | Biniossek et al., 2016 | ||
| Elongation factor Tu 1 | P0CE47 | 8-55 | peptide-Ala44+Arg-peptide | N | MS | Gly | Gly | Ala | Ala | Arg | Ala | Phe | Asp | Biniossek et al., 2016 | ||
| Elongation factor Tu 1 | P0CE47 | 317-343 | peptide-Phe333+Arg-peptide | N | MS | Gln | Phe | Tyr | Phe | Arg | Thr | Thr | Asp | Biniossek et al., 2016 | ||
| Elongation factor Tu 1 | P0CE47 | 70-118 | peptide-Val105+Val-peptide | N | MS | Ala | Ile | Leu | Val | Val | Ala | Ala | Thr | Biniossek et al., 2016 | ||
| Elongation factor Tu 1 | P0CE47 | 70-118 | peptide-Leu104+Val-peptide | N | MS | Gly | Ala | Ile | Leu | Val | Val | Ala | Ala | Biniossek et al., 2016 | ||
| Elongation factor Tu 1 | P0CE47 | 350-379 | peptide-Met359+Val-peptide | N | MS | Asn | Ile | Lys | Met | Val | Val | Thr | Leu | Biniossek et al., 2016 | ||
| Elongation factor Tu 1 | P0CE47 | 317-343 | peptide-Phe331+Tyr-peptide | N | MS | Arg | Pro | Gln | Phe | Tyr | Phe | Arg | Thr | Biniossek et al., 2016 | ||
| Elongation factor Tu 1 | P0CE47 | 8-55 | peptide-Gly19+His-peptide | N | MS | Gly | Thr | Ile | Gly | His | Val | Asp | His | Biniossek et al., 2016 | ||
| Elongation factor Tu 1 | P0CE47 | 350-379 | peptide-Ala368+Met-peptide | N | MS | His | Pro | Ile | Ala | Met | Asp | Asp | Gly | Biniossek et al., 2016 | ||
| Endoribonuclease YbeY | P0A898 | 22-37 | peptide-Ala30+Val-peptide | N | MS | Trp | Leu | Asn | Ala | Val | Ile | Pro | Gln | Biniossek et al., 2016 | ||
| Enolase | P0A6P9 | 169-181 | peptide-Ala176+Lys-peptide | N | MS | Pro | Val | Gly | Ala | Lys | Thr | Val | Lys | Biniossek et al., 2016 | ||
| Enolase | P0A6P9 | 296-329 | peptide-Leu319+Phe-peptide | N | MS | Gly | Asp | Asp | Leu | Phe | Val | Thr | Asn | Biniossek et al., 2016 | ||
| Enolase | P0A6P9 | 137-158 | peptide-Met151+Asn-peptide | N | MS | Val | Pro | Met | Met | Asn | Ile | Ile | Asn | Biniossek et al., 2016 | ||
| Enoyl-[acyl-carrier-protein] reductase [NADH] FabI | P0AEK4 | 78-111 | peptide-Gly93+Phe-peptide | N | MS | His | Ser | Ile | Gly | Phe | Ala | Pro | Gly | Biniossek et al., 2016 | ||
| Erythronate-4-phosphate dehydrogenase | P05459 | 22-51 | peptide-Asp39+Ala-peptide | N | MS | Ala | Asp | Ala | Asp | Ala | Leu | Met | Val | Biniossek et al., 2016 | ||
| Ferric uptake regulation protein | P0A9A9 | 50-74 | peptide-Ala53+Thr-peptide | N | MS | Ile | Gly | Leu | Ala | Thr | Val | Tyr | Arg | Biniossek et al., 2016 | ||
| FKBP-type peptidyl-prolyl cis-trans isomerase FkpA | P45523 | 223-244 | peptide-Phe241+Asp-peptide | N | MS | Thr | Leu | Val | Phe | Asp | Val | Glu | Leu | Biniossek et al., 2016 | ||
| Flavodoxin 1 | P61949 | 1-16 | peptide-Phe7+Phe-peptide | N | MS | Thr | Gly | Ile | Phe | Phe | Gly | Ser | Asp | Biniossek et al., 2016 | ||
| Flavodoxin 1 | P61949 | 129-146 | peptide-Gly141+Leu-peptide | N | MS | His | Phe | Val | Gly | Leu | Ala | Ile | Asp | Biniossek et al., 2016 | ||
| Formate acetyltransferase 1 | P09373 | 370-378 | peptide-Leu375+Trp-peptide | N | MS | Met | Thr | Ile | Leu | Trp | Ser | Glu | Lys | Biniossek et al., 2016 | ||
| Formate acetyltransferase 1 | P09373 | 509-551 | peptide-Ala543+Lys-peptide | N | MS | Ile | Lys | Tyr | Ala | Lys | Val | Lys | Pro | Biniossek et al., 2016 | ||
| Formate acetyltransferase 1 | P09373 | 104-120 | peptide-Ala109+Leu-peptide | N | MS | Leu | Lys | Arg | Ala | Leu | Ile | Pro | Phe | Biniossek et al., 2016 | ||
| Formate acetyltransferase 1 | P09373 | 402-453 | peptide-Met443+Leu-peptide | N | MS | Ala | Lys | Thr | Met | Leu | Tyr | Ala | Ile | Biniossek et al., 2016 | ||
| Formate acetyltransferase 1 | P09373 | 702-714 | peptide-Leu706+Asn-peptide | N | MS | Gly | Gln | His | Leu | Asn | Val | Asn | Val | Biniossek et al., 2016 | ||
| Formate acetyltransferase 1 | P09373 | 255-289 | peptide-Thr280+Ser-peptide | N | MS | Phe | Gly | Arg | Thr | Ser | Thr | Phe | Leu | Biniossek et al., 2016 | ||
| Formate-dependent phosphoribosylglycinamide formyltransferase | P33221 | 144-172 | peptide-Ser159+Ser-peptide | N | MS | Pro | Val | Met | Ser | Ser | Ser | Gly | Lys | Biniossek et al., 2016 | ||
| Fructose-bisphosphate aldolase class 2 | P0AB71 | 100-128 | peptide-Leu107+His-peptide | N | MS | Pro | Val | Ile | Leu | His | Thr | Asp | His | Biniossek et al., 2016 | ||
| Fructose-bisphosphate aldolase class 2 | P0AB71 | 100-128 | peptide-Ala113+Lys-peptide | N | MS | Asp | His | Cys | Ala | Lys | Lys | Leu | Leu | Biniossek et al., 2016 | ||
| Fructose-bisphosphate aldolase class 2 | P0AB71 | 275-298 | peptide-Met286+Asn-peptide | N | MS | Val | Val | Lys | Met | Asn | Ile | Asp | Thr | Biniossek et al., 2016 | ||
| Fructose-bisphosphate aldolase class 2 | P0AB71 | 248-274 | peptide-Phe262+Val-peptide | N | MS | Ser | Leu | Asn | Phe | Val | Phe | His | Gly | Biniossek et al., 2016 | ||
| Fructose-bisphosphate aldolase class 2 | P0AB71 | 210-247 | peptide-Gly228+Val-peptide | N | MS | Asn | Val | His | Gly | Val | Tyr | Lys | Pro | Biniossek et al., 2016 | ||
| Fructose-bisphosphate aldolase class 2 | P0AB71 | 248-274 | peptide-Leu260+Asn-peptide | N | MS | His | Asn | Ser | Leu | Asn | Phe | Val | Phe | Biniossek et al., 2016 | ||
| Fructose-bisphosphate aldolase class 2 | P0AB71 | 49-99 | peptide-Leu85+Gly-peptide | N | MS | Ala | Ala | Ile | Leu | Gly | Ala | Ile | Ser | Biniossek et al., 2016 | ||
| Fructose-bisphosphate aldolase class 2 | P0AB71 | 28-48 | peptide-Ala34+Val-peptide | N | MS | Ala | Leu | Pro | Ala | Val | Asn | Cys | Val | Biniossek et al., 2016 | ||
| Fructose-bisphosphate aldolase class 2 | P0AB71 | 210-247 | peptide-Gly233+Asn-peptide | N | MS | Tyr | Lys | Pro | Gly | Asn | Val | Val | Leu | Biniossek et al., 2016 | ||
| Fumarate hydratase class I, aerobic | P0AC33 | 46-78 | peptide-Met61+Leu-peptide | N | MS | Ala | Ser | Phe | Met | Leu | Arg | Pro | Ala | Biniossek et al., 2016 | ||
| Glucose-1-phosphate adenylyltransferase | P0A6V1 | 135-158 | peptide-Tyr135+Val-peptide | N | MS | Lys | Ala | Glu | Tyr | Val | Val | Ile | Leu | Biniossek et al., 2016 | ||
| Glucose-6-phosphate isomerase | P0A6T1 | 380-429 | peptide-Phe424+Phe-peptide | N | MS | Leu | Ser | Asn | Phe | Phe | Ala | Gln | Thr | Biniossek et al., 2016 | ||
| Glucose-6-phosphate isomerase | P0A6T1 | 477-490 | peptide-Leu485+Ile-peptide | N | MS | Leu | Gly | Ala | Leu | Ile | Ala | Leu | Tyr | Biniossek et al., 2016 | ||
| Glucose-6-phosphate isomerase | P0A6T1 | 1-21 | peptide-Ala10+Ala-peptide | N | MS | Thr | Gln | Thr | Ala | Ala | Trp | Gln | Ala | Biniossek et al., 2016 | ||
| Glutamate decarboxylase beta | P69910 | 365-373 | peptide-Phe365+Ile-peptide | N | MS | Pro | Tyr | Glu | Phe | Ile | Cys | Thr | Gly | Biniossek et al., 2016 | ||
| Glutamate decarboxylase beta | P69910 | 431-435 | peptide-Phe433+Ala-peptide | N | MS | Glu | Met | Asp | Phe | Ala | Glu | Leu | Leu | Biniossek et al., 2016 | ||
| Glutamate decarboxylase beta | P69910 | 50-70 | peptide-Gly54+Asn-peptide | N | MS | Tyr | Leu | Asp | Gly | Asn | Ala | Arg | Gln | Biniossek et al., 2016 | ||
| Glutamate synthase [NADPH] large chain | P09831 | 482-523 | peptide-Ala511+Gln-peptide | N | MS | Gln | Gln | Phe | Ala | Gln | Val | Thr | Asn | Biniossek et al., 2016 | ||
| Glutamate-1-semialdehyde 2,1-aminomutase | P23893 | 14-37 | peptide-Ala25+Phe-peptide | N | MS | Pro | Val | Arg | Ala | Phe | Thr | Gly | Val | Biniossek et al., 2016 | ||
| Glutamine synthetase | P0A9C5 | 167-195 | peptide-Gly178+Gly-peptide | N | MS | Ala | Val | Lys | Gly | Gly | Tyr | Phe | Pro | Biniossek et al., 2016 | ||
| Glutamine--fructose-6-phosphate aminotransferase [isomerizing] | P17169 | 260-281 | peptide-Gly270+Arg-peptide | N | MS | Thr | Leu | Thr | Gly | Arg | Ile | Ser | His | Biniossek et al., 2016 | ||
| Glutamine--fructose-6-phosphate aminotransferase [isomerizing] | P17169 | 461-482 | peptide-Ala468+Leu-peptide | N | MS | Lys | His | His | Ala | Leu | Phe | Leu | Gly | Biniossek et al., 2016 | ||
| Glutamine--fructose-6-phosphate aminotransferase [isomerizing] | P17169 | 571-609 | peptide-Leu584+Ala-peptide | N | MS | Leu | Gln | Leu | Leu | Ala | Tyr | His | Val | Biniossek et al., 2016 | ||
| Glutamine--fructose-6-phosphate aminotransferase [isomerizing] | P17169 | 571-609 | peptide-Leu583+Leu-peptide | N | MS | Pro | Leu | Gln | Leu | Leu | Ala | Tyr | His | Biniossek et al., 2016 | ||
| Glutamine--fructose-6-phosphate aminotransferase [isomerizing] | P17169 | 571-609 | peptide-Leu581+Gln-peptide | N | MS | Thr | Val | Pro | Leu | Gln | Leu | Leu | Ala | Biniossek et al., 2016 | ||
| Glutamine--fructose-6-phosphate aminotransferase [isomerizing] | P17169 | 571-609 | peptide-Tyr577+Thr-peptide | N | MS | Pro | Ile | Phe | Tyr | Thr | Val | Pro | Leu | Biniossek et al., 2016 | ||
| Glutamine--fructose-6-phosphate aminotransferase [isomerizing] | P17169 | 188-208 | peptide-Ala196+Leu-peptide | N | MS | Asp | Gln | Leu | Ala | Leu | Leu | Pro | Val | Biniossek et al., 2016 | ||
| Glutamine--tRNA ligase | P00962 | 133-152 | peptide-Gly135+Thr-peptide | N | MS | Glu | Tyr | Arg | Gly | Thr | Leu | Thr | Gln | Biniossek et al., 2016 | ||
| Glutamine--tRNA ligase | P00962 | 339-355 | peptide-Ala345+Val-peptide | N | MS | Arg | Ala | Met | Ala | Val | Ile | Asp | Pro | Biniossek et al., 2016 | ||
| Glutaredoxin 4 | P0AC69 | 62-79 | peptide-Ala66+Asn-peptide | N | MS | Pro | Lys | Tyr | Ala | Asn | Trp | Pro | Thr | Biniossek et al., 2016 | ||
| Glutaredoxin 4 | P0AC69 | 46-61 | peptide-Ala48+Tyr-peptide | N | MS | Glu | Arg | Phe | Ala | Tyr | Val | Asp | Ile | Biniossek et al., 2016 | ||
| Glutaredoxin 4 | P0AC69 | 46-61 | peptide-Asp51+Ile-peptide | N | MS | Ala | Tyr | Val | Asp | Ile | Leu | Gln | Asn | Biniossek et al., 2016 | ||
| Glutathione reductase | P06715 | 253-264 | peptide-Ala260+Ile-peptide | N | MS | Leu | Ile | Trp | Ala | Ile | Gly | Arg | Glu | Biniossek et al., 2016 | ||
| Glutathione S-transferase GstB | P0ACA7 | 68-94 | peptide-Arg83+Leu-peptide | N | MS | Gly | Gln | Lys | Arg | Leu | Trp | Ile | Asp | Biniossek et al., 2016 | ||
| Glyceraldehyde-3-phosphate dehydrogenase A | P0A9B2 | 171-221 | peptide-Ala178+Thr-peptide | N | MS | Thr | Val | His | Ala | Thr | Thr | Ala | Thr | Biniossek et al., 2016 | ||
| Glyceraldehyde-3-phosphate dehydrogenase A | P0A9B2 | 171-221 | peptide-Ala212+Lys-peptide | N | MS | Thr | Gly | Ala | Ala | Lys | Ala | Val | Gly | Biniossek et al., 2016 | ||
| Glyceraldehyde-3-phosphate dehydrogenase A | P0A9B2 | 288-315 | peptide-Ala295+Lys-peptide | N | MS | Val | Phe | Asp | Ala | Lys | Ala | Gly | Ile | Biniossek et al., 2016 | ||
| Glycerol dehydrogenase | P0A9S5 | 335-365 | peptide-Tyr349+Ala-peptide | N | MS | Asp | Gln | Val | Tyr | Ala | Ala | Leu | Leu | Biniossek et al., 2016 | ||
| Glycerol dehydrogenase | P0A9S5 | 137-178 | peptide-Ala167+Gly-peptide | N | MS | Leu | Leu | Ala | Ala | Gly | Ile | Gly | Asp | Biniossek et al., 2016 | ||
| Glycerol kinase | P0A6F3 | 332-383 | peptide-Tyr344+Val-peptide | N | MS | Asn | Gly | Val | Tyr | Val | Val | Pro | Ala | Biniossek et al., 2016 | ||
| Glycerol kinase | P0A6F3 | 439-460 | peptide-Gly449+Leu-peptide | N | MS | Tyr | Leu | Ala | Gly | Leu | Ala | Val | Gly | Biniossek et al., 2016 | ||
| Glycerol kinase | P0A6F3 | 64-85 | peptide-Ala68+Asp-peptide | N | MS | Leu | Ala | Lys | Ala | Asp | Ile | Ser | Ser | Biniossek et al., 2016 | ||
| Glycerol kinase | P0A6F3 | 64-85 | peptide-Ala76+Ala-peptide | N | MS | Asp | Gln | Ile | Ala | Ala | Ile | Gly | Ile | Biniossek et al., 2016 | ||
| Glycerol kinase | P0A6F3 | 4-35 | peptide-Ala19+Val-peptide | N | MS | Ser | Ser | Arg | Ala | Val | Val | Met | Asp | Biniossek et al., 2016 | ||
| Glycerol kinase | P0A6F3 | 439-460 | peptide-Ala448+Gly-peptide | N | MS | Ala | Tyr | Leu | Ala | Gly | Leu | Ala | Val | Biniossek et al., 2016 | ||
| Glycerophosphodiester phosphodiesterase, periplasmic | P09394 | 230-243 | peptide-Ala237+Tyr-peptide | N | MS | Gln | Leu | Ile | Ala | Tyr | Thr | Asp | Trp | Biniossek et al., 2016 | ||
| Glycerophosphodiester phosphodiesterase, periplasmic | P09394 | 46-63 | peptide-Met53+Ala-peptide | N | MS | Ala | Lys | Ala | Met | Ala | Tyr | Ala | Gln | Biniossek et al., 2016 | ||
| Glycerophosphodiester phosphodiesterase, periplasmic | P09394 | 288-322 | peptide-Leu308+Val-peptide | N | MS | Gln | Asn | Lys | Leu | Val | Val | His | Pro | Biniossek et al., 2016 | ||
| Glycerophosphodiester phosphodiesterase, periplasmic | P09394 | 323-358 | peptide-Ala338+Gly-peptide | N | MS | Tyr | Asn | Lys | Ala | Gly | Val | Asn | Gly | Biniossek et al., 2016 | ||
| Glycine dehydrogenase (decarboxylating) | P33195 | 226-235 | peptide-Tyr229+Thr-peptide | N | MS | Ile | His | Asp | Tyr | Thr | Ala | Leu | Ile | Biniossek et al., 2016 | ||
| Glycine dehydrogenase (decarboxylating) | P33195 | 410-426 | peptide-Ser414+Asp-peptide | N | MS | Asn | Leu | Arg | Ser | Asp | Ile | Leu | Asn | Biniossek et al., 2016 | ||
| Glycine dehydrogenase (decarboxylating) | P33195 | 831-858 | peptide-Ala852+Gly-peptide | N | MS | Phe | Pro | Val | Ala | Gly | Thr | Leu | Met | Biniossek et al., 2016 | ||
| Glycine dehydrogenase (decarboxylating) | P33195 | 882-893 | peptide-Ala887+Gly-peptide | N | MS | Gln | Val | Lys | Ala | Gly | Val | Trp | Pro | Biniossek et al., 2016 | ||
| Glycine dehydrogenase (decarboxylating) | P33195 | 29-64 | peptide-Gly43+Gln-peptide | N | MS | Ala | Leu | Thr | Gly | Gln | Ile | Val | Pro | Biniossek et al., 2016 | ||
| Glycine dehydrogenase (decarboxylating) | P33195 | 831-858 | peptide-Met847+Ser-peptide | N | MS | Ala | Pro | Thr | Met | Ser | Phe | Pro | Val | Biniossek et al., 2016 | ||
| Glycine dehydrogenase (decarboxylating) | P33195 | 641-661 | peptide-Met650+Val-peptide | N | MS | Ser | Cys | Ile | Met | Val | Thr | Tyr | Pro | Biniossek et al., 2016 | ||
| Glycine dehydrogenase (decarboxylating) | P33195 | 670-743 | peptide-Ala728+His-peptide | N | MS | Gly | Val | Lys | Ala | His | Leu | Ala | Pro | Biniossek et al., 2016 | ||
| Glycine--tRNA ligase alpha subunit | P00960 | 73-96 | peptide-Phe83+Gln-peptide | N | MS | Tyr | Tyr | Gln | Phe | Gln | Val | Val | Ile | Biniossek et al., 2016 | ||
| Glycine--tRNA ligase beta subunit | P00961 | 257-266 | peptide-Ala263+Lys-peptide | N | MS | Val | Leu | Thr | Ala | Lys | Phe | Glu | Glu | Biniossek et al., 2016 | ||
| Glyoxylate/hydroxypyruvate reductase B | P37666 | 1-21 | peptide-Leu7+Tyr-peptide | N | MS | Ser | Val | Ile | Leu | Tyr | Lys | Ala | Leu | Biniossek et al., 2016 | ||
| GMP synthase [glutamine-hydrolyzing] | P04079 | 127-161 | peptide-Phe154+Ile-peptide | N | MS | Pro | Ser | Asp | Phe | Ile | Thr | Val | Ala | Biniossek et al., 2016 | ||
| GMP synthase [glutamine-hydrolyzing] | P04079 | 127-161 | peptide-Met141+Ser-peptide | N | MS | Asp | Val | Trp | Met | Ser | His | Gly | Asp | Biniossek et al., 2016 | ||
| High-affinity gluconate transporter | P0AC94 | 119-134 | peptide-Ala125+Pro-peptide | N | MS | Ile | Met | Leu | Ala | Pro | Leu | Val | Ile | Biniossek et al., 2016 | ||
| Histidine--tRNA ligase | P60906 | 311-322 | peptide-Leu314+Leu-peptide | N | MS | Arg | Leu | Val | Leu | Leu | Val | Gln | Ala | Biniossek et al., 2016 | ||
| Histidinol-phosphate aminotransferase | P06986 | 45-57 | peptide-Leu47+Thr-peptide | N | MS | Glu | Phe | Gln | Leu | Thr | Gln | Gln | Thr | Biniossek et al., 2016 | ||
| Inactive recombination-promoting nuclease-like protein RpnE | P37014 | 4-22 | peptide-Pro9+His-peptide | N | MS | Thr | Ser | Ser | Pro | His | Asp | Ala | Val | Biniossek et al., 2016 | ||
| Inner membrane protein YjgN | P39338 | 23-59 | peptide-Thr35+Ile-peptide | N | MS | Val | Leu | Leu | Thr | Ile | Ile | Thr | Leu | Biniossek et al., 2016 | ||
| Inner membrane protein YqjF | P42619 | 6-39 | peptide-Arg13+Ile-peptide | N | MS | Leu | Val | Ala | Arg | Ile | Leu | Met | Pro | Biniossek et al., 2016 | ||
| Inorganic pyrophosphatase | P0A7A9 | 130-140 | peptide-Ala133+Gln-peptide | N | MS | Leu | Leu | Lys | Ala | Gln | Ile | Ala | His | Biniossek et al., 2016 | ||
| Integration host factor subunit beta | P0A6Y1 | 9-23 | peptide-Ala11+Thr-peptide | N | MS | Glu | Arg | Leu | Ala | Thr | Gln | Gln | Ser | Biniossek et al., 2016 | ||
| Integration host factor subunit beta | P0A6Y1 | 9-23 | peptide-Ser15+His-peptide | N | MS | Thr | Gln | Gln | Ser | His | Ile | Pro | Ala | Biniossek et al., 2016 | ||
| Isocitrate dehydrogenase [NADP] | P08200 | 122-145 | peptide-Gln135+Gly-peptide | N | MS | Arg | Tyr | Tyr | Gln | Gly | Thr | Pro | Ser | Biniossek et al., 2016 | ||
| Isocitrate dehydrogenase [NADP] | P08200 | 3-25 | peptide-Gly19+Lys-peptide | N | MS | Leu | Gln | Asn | Gly | Lys | Leu | Asn | Val | Biniossek et al., 2016 | ||
| Isocitrate dehydrogenase [NADP] | P08200 | 296-331 | peptide-Ala315+Gln-peptide | N | MS | Ala | Leu | Ala | Ala | Gln | Val | Gly | Gly | Biniossek et al., 2016 | ||
| Isocitrate dehydrogenase [NADP] | P08200 | 275-295 | peptide-Gln287+Gln-peptide | N | MS | Ala | Phe | Leu | Gln | Gln | Ile | Leu | Leu | Biniossek et al., 2016 | ||
| Isoleucine--tRNA ligase | P00956 | 838-845 | peptide-Ala838+Ala-peptide | N | MS | Ser | Leu | Glu | Ala | Ala | Val | Thr | Leu | Biniossek et al., 2016 | ||
| KHG/KDPG aldolase | P0A955 | 139-193 | peptide-Gly182+Gly-peptide | N | MS | Leu | Cys | Ile | Gly | Gly | Ser | Trp | Leu | Biniossek et al., 2016 | ||
| KHG/KDPG aldolase | P0A955 | 86-98 | peptide-Ala91+Ile-peptide | N | MS | Ala | Gln | Phe | Ala | Ile | Ser | Pro | Gly | Biniossek et al., 2016 | ||
| L-threonine 3-dehydrogenase | P07913 | 124-165 | peptide-Tyr124+Leu-peptide | N | MS | Phe | Ala | Glu | Tyr | Leu | Val | Ile | Pro | Biniossek et al., 2016 | ||
| L-threonine dehydratase catabolic TdcB | P0AGF6 | 254-263 | peptide-Asp257+Ile-peptide | N | MS | Leu | Val | Asp | Asp | Ile | Val | Leu | Val | Biniossek et al., 2016 | ||
| L-threonine dehydratase catabolic TdcB | P0AGF6 | 266-282 | peptide-Ala272+Leu-peptide | N | MS | Ser | Met | Ile | Ala | Leu | Ile | Gln | Arg | Biniossek et al., 2016 | ||
| L-threonine dehydratase catabolic TdcB | P0AGF6 | 124-140 | peptide-Ala136+Lys-peptide | N | MS | Asp | Thr | Ile | Ala | Lys | Val | Ser | Glu | Biniossek et al., 2016 | ||
| Lactaldehyde dehydrogenase | P25553 | 399-434 | peptide-Ser413+Ser-peptide | N | MS | Gly | Leu | Thr | Ser | Ser | Ile | Tyr | Thr | Biniossek et al., 2016 | ||
| Lactoylglutathione lyase | P0AC81 | 100-114 | peptide-Ala111+Phe-peptide | N | MS | Thr | Val | Ile | Ala | Phe | Val | Glu | Asp | Biniossek et al., 2016 | ||
| Lactoylglutathione lyase | P0AC81 | 100-114 | peptide-Gly105+Gly-peptide | N | MS | Pro | Val | Lys | Gly | Gly | Thr | Thr | Val | Biniossek et al., 2016 | ||
| Leucine--tRNA ligase | P07813 | 330-347 | peptide-Met336+Ala-peptide | N | MS | Gly | Ala | Val | Met | Ala | Val | Pro | Gly | Biniossek et al., 2016 | ||
| Lon protease | P0A9M0 | 722-739 | peptide-Gly729+Gly-peptide | N | MS | Ala | His | Arg | Gly | Gly | Ile | Lys | Thr | Biniossek et al., 2016 | ||
| Lon protease | P0A9M0 | 615-632 | peptide-Gly628+Ser-peptide | N | MS | Thr | Tyr | Thr | Gly | Ser | Leu | Gly | Glu | Biniossek et al., 2016 | ||
| Lon protease | P0A9M0 | 11-34 | peptide-Met25+Val-peptide | N | MS | Tyr | Pro | His | Met | Val | Ile | Pro | Leu | Biniossek et al., 2016 | ||
| Lon protease | P0A9M0 | 707-721 | peptide-Gly711+Gln-peptide | N | MS | Thr | Leu | Arg | Gly | Gln | Val | Leu | Pro | Biniossek et al., 2016 | ||
| Magnesium and cobalt efflux protein CorC | P0AE78 | 172-182 | peptide-Gly177+Leu-peptide | N | MS | Gly | Val | Ser | Gly | Leu | Val | Thr | Ile | Biniossek et al., 2016 | ||
| Malate dehydrogenase | P61889 | 1-29 | peptide-Leu18+Leu-peptide | N | MS | Ala | Leu | Ala | Leu | Leu | Leu | Lys | Thr | Biniossek et al., 2016 | ||
| Malate dehydrogenase | P61889 | 1-29 | peptide-Ala17+Leu-peptide | N | MS | Gln | Ala | Leu | Ala | Leu | Leu | Leu | Lys | Biniossek et al., 2016 | ||
| Malate dehydrogenase | P61889 | 171-196 | peptide-Ser187+Gln-peptide | N | MS | Pro | Leu | Leu | Ser | Gln | Val | Pro | Gly | Biniossek et al., 2016 | ||
| Malonyl CoA-acyl carrier protein transacylase | P0AAI9 | 263-270 | peptide-Ala265+Ala-peptide | N | MS | Glu | Tyr | Met | Ala | Ala | Gln | Gly | Val | Biniossek et al., 2016 | ||
| Maltose/maltodextrin-binding periplasmic protein | P0AEX9 | 248-300 | peptide-Gly286+Val-peptide | N | MS | Pro | Phe | Val | Gly | Val | Leu | Ser | Ala | Biniossek et al., 2016 | ||
| Maltose/maltodextrin-binding periplasmic protein | P0AEX9 | 318-334 | peptide-Ala329+Leu-peptide | N | MS | Gly | Ala | Val | Ala | Leu | Lys | Ser | Tyr | Biniossek et al., 2016 | ||
| Maltose/maltodextrin-binding periplasmic protein | P0AEX9 | 248-300 | peptide-Ala290+Gly-peptide | N | MS | Val | Leu | Ser | Ala | Gly | Ile | Asn | Ala | Biniossek et al., 2016 | ||
| Maltose/maltodextrin-binding periplasmic protein | P0AEX9 | 199-240 | peptide-Met230+Asn-peptide | N | MS | Asn | Lys | His | Met | Asn | Ala | Asp | Thr | Biniossek et al., 2016 | ||
| Maltose/maltodextrin-binding periplasmic protein | P0AEX9 | 355-385 | peptide-Ala372+Val-peptide | N | MS | Val | Arg | Thr | Ala | Val | Ile | Asn | Ala | Biniossek et al., 2016 | ||
| Mannonate dehydratase | P24215 | 3-38 | peptide-Ala17+Asp-peptide | N | MS | Val | Ser | Leu | Ala | Asp | Val | Arg | Gln | Biniossek et al., 2016 | ||
| Mannose-6-phosphate isomerase | P00946 | 227-245 | peptide-Leu236+Asn-peptide | N | MS | Pro | Leu | Leu | Leu | Asn | Val | Val | Lys | Biniossek et al., 2016 | ||
| Met repressor | P0A8U6 | 61-80 | peptide-Ala65+Phe-peptide | N | MS | Phe | Leu | His | Ala | Phe | Thr | Gly | Gln | Biniossek et al., 2016 | ||
| Methionine--tRNA ligase | P00959 | 222-224 | peptide-Trp222+Phe-peptide | N | MS | Met | Gln | Glu | Trp | Phe | Glu | Ser | Gly | Biniossek et al., 2016 | ||
| Methionine--tRNA ligase | P00959 | 511-541 | peptide-Gly522+His-peptide | N | MS | Pro | Leu | Leu | Gly | His | Lys | Val | Asn | Biniossek et al., 2016 | ||
| Multidrug export protein AcrF | P24181 | 797-816 | peptide-Thr805+Ser-peptide | N | MS | Ala | Phe | Thr | Thr | Ser | His | Trp | Val | Biniossek et al., 2016 | ||
| Multidrug resistance protein MdtE | P37636 | 226-245 | peptide-Gly236+Ser-peptide | N | MS | Gln | Val | Gln | Gly | Ser | Thr | Pro | Val | Biniossek et al., 2016 | ||
| Multifunctional CCA protein | P06961 | 294-303 | peptide-Ile294+Arg-peptide | N | MS | Pro | Asn | Glu | Ile | Arg | Asp | Leu | Ala | Biniossek et al., 2016 | ||
| N-acetylneuraminate epimerase | P39371 | 241-287 | peptide-Leu248+Lys-peptide | N | MS | Gly | Asn | Asn | Leu | Lys | Trp | Asn | Lys | Biniossek et al., 2016 | ||
| N5-carboxyaminoimidazole ribonucleotide synthase | P09029 | 22-35 | peptide-Asp33+Ala-peptide | N | MS | Val | Gly | Leu | Asp | Ala | Glu | Pro | Ala | Biniossek et al., 2016 | ||
| NAD(P)H dehydrogenase (quinone) | P0A8G6 | 148-177 | peptide-Ala162+Thr-peptide | N | MS | Pro | Tyr | Gly | Ala | Thr | Thr | Ile | Ala | Biniossek et al., 2016 | ||
| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA | P25889 | 315-327 | peptide-Met315+Val-peptide | N | MS | Leu | Gln | Glu | Met | Val | Gly | Leu | Ala | Biniossek et al., 2016 | ||
| NAD-dependent dihydropyrimidine dehydrogenase subunit PreT | P76440 | 81-109 | peptide-Ala90+Gly-peptide | N | MS | Cys | Thr | Arg | Ala | Gly | Val | Asp | Ala | Biniossek et al., 2016 | ||
| NADP-dependent 3-hydroxy acid dehydrogenase YdfG | P39831 | 233-248 | peptide-Ala241+Gly-peptide | N | MS | Gln | Ser | Tyr | Ala | Gly | Leu | Asn | Val | Biniossek et al., 2016 | ||
| Nickel-binding periplasmic protein | P33590 | 244-269 | peptide-Ala252+Arg-peptide | N | MS | Asp | Thr | Phe | Ala | Arg | Phe | Ser | Gln | Biniossek et al., 2016 | ||
| Nucleoside diphosphate kinase | P0A763 | 81-113 | peptide-Ala98+Leu-peptide | N | MS | Pro | Ala | Asn | Ala | Leu | Ala | Gly | Thr | Biniossek et al., 2016 | ||
| Oligopeptidase A | P27298 | 209-233 | peptide-Leu214+Asp-peptide | N | MS | Leu | Leu | Thr | Leu | Asp | Ile | Pro | Ser | Biniossek et al., 2016 | ||
| Outer membrane porin C | P06996 | 241-281 | peptide-Tyr254+Leu-peptide | N | MS | Asn | Asn | Ile | Tyr | Leu | Ala | Ala | Gln | Biniossek et al., 2016 | ||
| Outer membrane porin C | P06996 | 211-240 | peptide-Ala230+Ala-peptide | N | MS | Gln | Asn | Thr | Ala | Ala | Tyr | Ile | Gly | Biniossek et al., 2016 | ||
| Outer membrane porin C | P06996 | 131-180 | peptide-Ala150+Thr-peptide | N | MS | Asn | Gly | Phe | Ala | Thr | Tyr | Arg | Asn | Biniossek et al., 2016 | ||
| Outer membrane porin F | P02931 | 206-223 | peptide-Gly211+Ala-peptide | N | MS | Gly | Ile | Val | Gly | Ala | Tyr | Gly | Ala | Biniossek et al., 2016 | ||
| Outer membrane protein A | P0A910 | 90-149 | peptide-Gly146+Gly-peptide | N | MS | Val | Phe | Ala | Gly | Gly | Val | Glu | Tyr | Biniossek et al., 2016 | ||
| Outer membrane protein A | P0A910 | 54-73 | peptide-Ala60+Phe-peptide | N | MS | Gly | Ala | Gly | Ala | Phe | Gly | Gly | Tyr | Biniossek et al., 2016 | ||
| Outer membrane usher protein SfmD | P77468 | 718-757 | peptide-Leu745+Asp-peptide | N | MS | Arg | Ile | Ala | Leu | Asp | Thr | Asn | Thr | Biniossek et al., 2016 | ||
| Oxygen-insensitive NAD(P)H nitroreductase | P38489 | 181-197 | peptide-Ser185+Leu-peptide | N | MS | Gly | Tyr | Thr | Ser | Leu | Val | Val | Val | Biniossek et al., 2016 | ||
| Peptidase E | P0A7C6 | 193-218 | peptide-Ala203+Thr-peptide | N | MS | Lys | Gly | His | Ala | Thr | Leu | Gly | Gly | Biniossek et al., 2016 | ||
| Peptidyl-prolyl cis-trans isomerase B | P23869 | 34-56 | peptide-Phe48+Met-peptide | N | MS | Ile | Asn | Gly | Phe | Met | Ile | Gln | Gly | Biniossek et al., 2016 | ||
| Peptidyl-prolyl cis-trans isomerase B | P23869 | 72-113 | peptide-Phe98+Phe-peptide | N | MS | Thr | Ala | Gln | Phe | Phe | Ile | Asn | Val | Biniossek et al., 2016 | ||
| Peptidyl-tRNA hydrolase | P0A7D1 | 16-33 | peptide-Ala23+Gly-peptide | N | MS | Arg | His | Asn | Ala | Gly | Ala | Trp | Phe | Biniossek et al., 2016 | ||
| Peroxiredoxin Bcp | P0AE52 | 60-76 | peptide-Ala63+Gly-peptide | N | MS | Leu | Lys | Lys | Ala | Gly | Val | Asp | Val | Biniossek et al., 2016 | ||
| PFL-like enzyme TdcE | P42632 | 140-200 | peptide-Tyr140+Leu-peptide | N | MS | Glu | Phe | Glu | Tyr | Leu | Phe | Thr | Asp | Biniossek et al., 2016 | ||
| PFL-like enzyme TdcE | P42632 | 374-382 | peptide-Leu379+Trp-peptide | N | MS | Leu | Thr | Ile | Leu | Trp | Ser | Glu | Glu | Biniossek et al., 2016 | ||
| Phenylalanine--tRNA ligase alpha subunit | P08312 | 7-30 | peptide-Ala13+Ala-peptide | N | MS | Ser | Ala | Lys | Ala | Ala | Ile | Ser | Gln | Biniossek et al., 2016 | ||
| Phenylalanine--tRNA ligase alpha subunit | P08312 | 66-77 | peptide-Ala73+Arg-peptide | N | MS | Ala | Leu | Asn | Ala | Arg | Lys | Ala | Glu | Biniossek et al., 2016 | ||
| Phenylalanine--tRNA ligase beta subunit | P07395 | 640-657 | peptide-Ala650+Ala-peptide | N | MS | Gly | Gln | Ser | Ala | Ala | Ile | Tyr | Leu | Biniossek et al., 2016 | ||
| Phenylalanine--tRNA ligase beta subunit | P07395 | 686-699 | peptide-Ala690+Asp-peptide | N | MS | Asn | Lys | Leu | Ala | Asp | Arg | Val | Val | Biniossek et al., 2016 | ||
| Phosphate acetyltransferase | P0A9M8 | 364-375 | peptide-Asp372+Trp-peptide | N | MS | Ile | Asn | Ala | Asp | Trp | Ile | Glu | Ser | Biniossek et al., 2016 | ||
| Phosphate acetyltransferase | P0A9M8 | 154-181 | peptide-Gly169+Val-peptide | N | MS | Asn | Ile | Thr | Gly | Val | Ile | Val | Asn | Biniossek et al., 2016 | ||
| Phosphate acetyltransferase | P0A9M8 | 364-375 | peptide-Ala366+Asn-peptide | N | MS | Glu | Tyr | Val | Ala | Asn | Tyr | Ile | Asn | Biniossek et al., 2016 | ||
| Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive | P00888 | 22-34 | peptide-Ala25+Ala-peptide | N | MS | Gln | Leu | Lys | Ala | Ala | Phe | Pro | Leu | Biniossek et al., 2016 | ||
| Phosphocarrier protein HPr | P0AA04 | 6-25 | peptide-Leu14+His-peptide | N | MS | Pro | Asn | Gly | Leu | His | Thr | Arg | Pro | Biniossek et al., 2016 | ||
| Phosphodiesterase YaeI | P37049 | 34-77 | peptide-Arg61+Phe-peptide | N | MS | His | Tyr | Ser | Arg | Phe | Val | Pro | Leu | Biniossek et al., 2016 | ||
| Phosphodiesterase YfcE | P67095 | 78-97 | peptide-Met81+Leu-peptide | N | MS | Val | Asp | Gln | Met | Leu | Leu | His | Phe | Biniossek et al., 2016 | ||
| Phosphoenolpyruvate carboxykinase (ATP) | P22259 | 472-485 | peptide-Leu480+Ala-peptide | N | MS | Met | Phe | Asn | Leu | Ala | Ile | Pro | Thr | Biniossek et al., 2016 | ||
| Phosphoenolpyruvate carboxylase | P00864 | 769-780 | peptide-Trp777+Leu-peptide | N | MS | Ala | Asp | Leu | Trp | Leu | Ala | Glu | Tyr | Biniossek et al., 2016 | ||
| Phosphoenolpyruvate-protein phosphotransferase | P08839 | 271-282 | peptide-Ala273+Asn-peptide | N | MS | Glu | Val | Cys | Ala | Asn | Ile | Gly | Thr | Biniossek et al., 2016 | ||
| Phosphoglucomutase | P36938 | 214-242 | peptide-Leu231+Gly-peptide | N | MS | Gly | Leu | Thr | Leu | Gly | Val | Asp | Pro | Biniossek et al., 2016 | ||
| Phosphoglycerate kinase | P0A799 | 181-235 | peptide-Ala223+Ala-peptide | N | MS | Thr | Phe | Ile | Ala | Ala | Gln | Gly | His | Biniossek et al., 2016 | ||
| Phosphoglycerate kinase | P0A799 | 72-103 | peptide-Asn79+Tyr-peptide | N | MS | Pro | Val | Val | Asn | Tyr | Leu | Lys | Asp | Biniossek et al., 2016 | ||
| Phosphoglycerate kinase | P0A799 | 297-314 | peptide-Ala301+Lys-peptide | N | MS | Leu | Lys | Asn | Ala | Lys | Thr | Ile | Leu | Biniossek et al., 2016 | ||
| Phosphoglycerate kinase | P0A799 | 242-262 | peptide-Leu245+Leu-peptide | N | MS | Ala | Lys | Arg | Leu | Leu | Thr | Thr | Cys | Biniossek et al., 2016 | ||
| Phosphoglycerate kinase | P0A799 | 181-235 | peptide-Ala218+Asn-peptide | N | MS | Gly | Gly | Ile | Ala | Asn | Thr | Phe | Ile | Biniossek et al., 2016 | ||
| Phosphoglycerate kinase | P0A799 | 181-235 | peptide-Ala224+Gln-peptide | N | MS | Phe | Ile | Ala | Ala | Gln | Gly | His | Asp | Biniossek et al., 2016 | ||
| Phosphoglycerate kinase | P0A799 | 334-368 | peptide-Ser357+Tyr-peptide | N | MS | Asp | Lys | Ile | Ser | Tyr | Ile | Ser | Thr | Biniossek et al., 2016 | ||
| Phosphoglycerate kinase | P0A799 | 372-382 | peptide-Ala379+Met-peptide | N | MS | Pro | Ala | Val | Ala | Met | Leu | Glu | Glu | Biniossek et al., 2016 | ||
| Phosphoglycerate kinase | P0A799 | 46-65 | peptide-Met55+Val-peptide | N | MS | Ala | Lys | Val | Met | Val | Thr | Ser | His | Biniossek et al., 2016 | ||
| Phosphoglycolate phosphatase | P32662 | 109-146 | peptide-Ala125+Lys-peptide | N | MS | Ala | Leu | Gln | Ala | Lys | Gly | Leu | Pro | Biniossek et al., 2016 | ||
| Phosphoheptose isomerase | P63224 | 73-106 | peptide-Ser89+Cys-peptide | N | MS | Ser | His | Ile | Ser | Cys | Val | Gly | Asn | Biniossek et al., 2016 | ||
| Phosphopentomutase | P0A6K6 | 201-236 | peptide-Leu233+Ala-peptide | N | MS | Arg | His | Asp | Leu | Ala | Val | Glu | Pro | Biniossek et al., 2016 | ||
| Phosphoribosylamine--glycine ligase | P15640 | 329-357 | peptide-Met336+Ala-peptide | N | MS | Gly | Val | Val | Met | Ala | Ala | Gly | Gly | Biniossek et al., 2016 | ||
| Phosphoribosylamine--glycine ligase | P15640 | 376-396 | peptide-Leu385+Cys-peptide | N | MS | Gly | Arg | Val | Leu | Cys | Val | Thr | Ala | Biniossek et al., 2016 | ||
| Phosphoribosylamine--glycine ligase | P15640 | 74-102 | peptide-Ala87+Gly-peptide | N | MS | Phe | Arg | Ala | Ala | Gly | Leu | Lys | Ile | Biniossek et al., 2016 | ||
| Phosphoribosylamine--glycine ligase | P15640 | 250-262 | peptide-Gly258+Met-peptide | N | MS | Thr | Val | Lys | Gly | Met | Ala | Ala | Glu | Biniossek et al., 2016 | ||
| Phosphoribosylaminoimidazole-succinocarboxamide synthase | P0A7D7 | 7-19 | peptide-Gly10+Lys-peptide | N | MS | Leu | Tyr | Arg | Gly | Lys | Ala | Lys | Thr | Biniossek et al., 2016 | ||
| Phosphoribosylformylglycinamidine cyclo-ligase | P08178 | 169-202 | peptide-Ala183+Leu-peptide | N | MS | Val | Leu | Ile | Ala | Leu | Gly | Ser | Ser | Biniossek et al., 2016 | ||
| Phosphoribosylformylglycinamidine synthase | P15254 | 550-565 | peptide-Leu553+Ala-peptide | N | MS | Arg | Tyr | Val | Leu | Ala | Val | Ala | Ala | Biniossek et al., 2016 | ||
| Phosphoribosylformylglycinamidine synthase | P15254 | 295-315 | peptide-Ala301+Ile-peptide | N | MS | His | Pro | Thr | Ala | Ile | Ser | Pro | Trp | Biniossek et al., 2016 | ||
| Phosphoribosylformylglycinamidine synthase | P15254 | 1214-1231 | peptide-Ala1219+Leu-peptide | N | MS | Gly | Leu | Val | Ala | Leu | Arg | Tyr | Val | Biniossek et al., 2016 | ||
| Phosphoserine aminotransferase | P23721 | 275-315 | peptide-Met298+Asn-peptide | N | MS | Arg | Ser | Arg | Met | Asn | Val | Pro | Phe | Biniossek et al., 2016 | ||
| Polyribonucleotide nucleotidyltransferase | P05055 | 621-646 | peptide-Ala637+Phe-peptide | N | MS | Asp | Phe | Gly | Ala | Phe | Val | Ala | Ile | Biniossek et al., 2016 | ||
| Polyribonucleotide nucleotidyltransferase | P05055 | 348-367 | peptide-Ala354+Thr-peptide | N | MS | Leu | Val | Thr | Ala | Thr | Leu | Gly | Thr | Biniossek et al., 2016 | ||
| Probable deoxycholate-binding periplasmic protein YgiS | Q46863 | 244-261 | peptide-Gly253+Tyr-peptide | N | MS | Ser | Val | Thr | Gly | Tyr | Asn | Arg | Tyr | Biniossek et al., 2016 | ||
| Probable quinol monooxygenase YgiN | P0ADU2 | 8-34 | peptide-Ala25+Lys-peptide | N | MS | Asp | Gln | Phe | Ala | Lys | Ile | Val | Pro | Biniossek et al., 2016 | ||
| Probable transcriptional regulatory protein YebC | P0A8A0 | 212-224 | peptide-Met217+Arg-peptide | N | MS | Pro | Lys | Leu | Met | Arg | Leu | Ile | Asp | Biniossek et al., 2016 | ||
| Proline--tRNA ligase | P16659 | 2-13 | peptide-Leu8+Ser-peptide | N | MS | Gln | Tyr | Leu | Leu | Ser | Thr | Leu | Lys | Biniossek et al., 2016 | ||
| protein CT_858 | O84866 | 1-601 | peptide-Met234+Arg-peptide | P | NT | Gln | Lys | Ser | Met | Arg | Ser | Phe | Phe | Chen et al., 2010 | ||
| protein CT_858 | O84866 | 235-601 | peptide-Met256+Val-peptide | P | NT | Tyr | Ser | Pro | Met | Val | Pro | His | Phe | Chen et al., 2010 | ||
| protein CT_858 | O84866 | 235-601 | peptide-Ser275+Gly-peptide | P | NT | Gly | Leu | Lys | Ser | Gly | Tyr | Asn | Ile | Chen et al., 2010 | ||
| Protein FdhE | P13024 | 47-65 | peptide-Ala58+Leu-peptide | N | MS | Arg | Phe | Ala | Ala | Leu | Ile | Ala | His | Biniossek et al., 2016 | ||
| Protein GlcG | P0AEQ1 | 78-96 | peptide-Ala85+Phe-peptide | N | MS | Gly | Arg | Thr | Ala | Phe | Val | Thr | Ala | Biniossek et al., 2016 | ||
| Protein GrpE | P09372 | 145-161 | peptide-Ala158+Met-peptide | N | MS | Gln | Ala | Ile | Ala | Met | Val | Glu | Ser | Biniossek et al., 2016 | ||
| Protein MioC | P03817 | 43-71 | peptide-Leu51+Val-peptide | N | MS | Gly | Ile | Trp | Leu | Val | Ile | Ser | Ser | Biniossek et al., 2016 | ||
| Protein RecA | P0A7G6 | 298-315 | peptide-Ala306+Thr-peptide | N | MS | Lys | Ala | Asn | Ala | Thr | Ala | Trp | Leu | Biniossek et al., 2016 | ||
| Protein SanA | P0AFY2 | 183-199 | peptide-Ile195+Phe-peptide | N | MS | Asp | Leu | Tyr | Ile | Phe | Lys | Arg | Glu | Biniossek et al., 2016 | ||
| Protein SufA | P77667 | 72-91 | peptide-Leu77+Phe-peptide | N | MS | Gly | Ala | Lys | Leu | Phe | Val | Pro | Leu | Biniossek et al., 2016 | ||
| Protein YgiW | P0ADU5 | 51-69 | peptide-Gly65+Asn-peptide | N | MS | Thr | Leu | Arg | Gly | Asn | Ile | Val | Glu | Biniossek et al., 2016 | ||
| Protein YiaL | P37673 | 40-56 | peptide-Ile45+Tyr-peptide | N | MS | Gly | Lys | Asn | Ile | Tyr | Thr | Gln | Ile | Biniossek et al., 2016 | ||
| Protein YnjB | P76223 | 84-102 | peptide-Gly87+Arg-peptide | N | MS | Ala | Ala | Ala | Gly | Arg | Lys | Thr | Gly | Biniossek et al., 2016 | ||
| Protein-export protein SecB | P0AG86 | 91-112 | peptide-Ala100+Tyr-peptide | N | MS | Cys | Leu | Gly | Ala | Tyr | Cys | Pro | Asn | Biniossek et al., 2016 | ||
| PTS system glucose-specific EIIA component | P69783 | 1-22 | peptide-Ser9+Leu-peptide | N | MS | Lys | Leu | Lys | Ser | Leu | Val | Ser | Asp | Biniossek et al., 2016 | ||
| PTS system glucose-specific EIIA component | P69783 | 45-73 | peptide-Met60+Val-peptide | N | MS | Gly | Asn | Lys | Met | Val | Ala | Pro | Val | Biniossek et al., 2016 | ||
| PTS system mannose-specific EIIAB component | P69797 | 239-251 | peptide-Met241+Leu-peptide | N | MS | Glu | Arg | Val | Met | Leu | Leu | Phe | Thr | Biniossek et al., 2016 | ||
| Purine nucleoside phosphoramidase | P0ACE7 | 15-57 | peptide-Leu41+Ile-peptide | N | MS | Thr | His | Ile | Leu | Ile | Ile | Pro | Asn | Biniossek et al., 2016 | ||
| Purine nucleoside phosphorylase DeoD-type | P0ABP8 | 10-31 | peptide-Ala26+Lys-peptide | N | MS | Pro | Leu | Arg | Ala | Lys | Tyr | Ile | Ala | Biniossek et al., 2016 | ||
| Purine nucleoside phosphorylase DeoD-type | P0ABP8 | 193-211 | peptide-Cys201+Thr-peptide | N | MS | Leu | Thr | Ile | Cys | Thr | Val | Ser | Asp | Biniossek et al., 2016 | ||
| Putative ABC transporter arginine-binding protein 2 | P30859 | 148-180 | peptide-Ala159+Lys-peptide | N | MS | Tyr | Gln | Asn | Ala | Lys | Leu | Asp | Leu | Biniossek et al., 2016 | ||
| Putative acid--amine ligase YgiC | P0ADT5 | 258-275 | peptide-Ala268+Leu-peptide | N | MS | Ser | Asn | Lys | Ala | Leu | Leu | Pro | Leu | Biniossek et al., 2016 | ||
| Putative dehydratase subunit YjiM | P39384 | 322-341 | peptide-Tyr322+Gln-peptide | N | MS | Val | Glu | Glu | Tyr | Gln | Val | Asp | Gly | Biniossek et al., 2016 | ||
| Putative NAD(P)H nitroreductase YdjA | P0ACY1 | 6-18 | peptide-Ala13+Ser-peptide | N | MS | Arg | Arg | Ser | Ala | Ser | Arg | Leu | Ala | Biniossek et al., 2016 | ||
| Putative reactive intermediate deaminase TdcF | P0AGL2 | 7-41 | peptide-Gly31+Gln-peptide | N | MS | Phe | Thr | Ser | Gly | Gln | Ile | Pro | Val | Biniossek et al., 2016 | ||
| Putative reactive intermediate deaminase TdcF | P0AGL2 | 7-41 | peptide-Met26+Val-peptide | N | MS | Leu | Gly | Ser | Met | Val | Phe | Thr | Ser | Biniossek et al., 2016 | ||
| Putative reactive intermediate deaminase TdcF | P0AGL2 | 7-41 | peptide-Gln19+Gly-peptide | N | MS | Pro | Tyr | Val | Gln | Gly | Val | Asp | Leu | Biniossek et al., 2016 | ||
| Putative transport protein YbjL | P60869 | 270-291 | peptide-Asn288+Gly-peptide | N | MS | Ser | Phe | Arg | Asn | Gly | Lys | Glu | Val | Biniossek et al., 2016 | ||
| Putative transport protein YidE | P60872 | 242-277 | peptide-Gly275+Gln-peptide | N | MS | Leu | Val | Ile | Gly | Gln | Glu | Val | Asp | Biniossek et al., 2016 | ||
| Pyrimidine/purine nucleoside phosphorylase | P0C037 | 45-66 | peptide-Gly50+Ala-peptide | N | MS | Val | Ile | Ser | Gly | Ala | Leu | Asn | Val | Biniossek et al., 2016 | ||
| Pyruvate dehydrogenase E1 component | P0AFG8 | 250-278 | peptide-Asn253+Leu-peptide | N | MS | Lys | Leu | Asp | Asn | Leu | Val | Phe | Val | Biniossek et al., 2016 | ||
| Pyruvate dehydrogenase E1 component | P0AFG8 | 187-213 | peptide-Met195+Gly-peptide | N | MS | Thr | Val | Ser | Met | Gly | Leu | Gly | Pro | Biniossek et al., 2016 | ||
| Pyruvate dehydrogenase E1 component | P0AFG8 | 745-764 | peptide-Ser761+Phe-peptide | N | MS | Ser | Val | Thr | Ser | Phe | Thr | Glu | Leu | Biniossek et al., 2016 | ||
| Pyruvate dehydrogenase E1 component | P0AFG8 | 250-278 | peptide-Cys260+Asn-peptide | N | MS | Val | Ile | Asn | Cys | Asn | Leu | Gln | Arg | Biniossek et al., 2016 | ||
| Pyruvate dehydrogenase E1 component | P0AFG8 | 811-836 | peptide-Thr814+Tyr-peptide | N | MS | Gln | Val | Arg | Thr | Tyr | Val | Pro | Ala | Biniossek et al., 2016 | ||
| Pyruvate dehydrogenase E1 component | P0AFG8 | 239-249 | peptide-Gly241+Ala-peptide | N | MS | Glu | Ser | Lys | Gly | Ala | Ile | Thr | Ile | Biniossek et al., 2016 | ||
| Pyruvate dehydrogenase E1 component | P0AFG8 | 531-552 | peptide-Gly537+Ile-peptide | N | MS | Arg | Gln | Ile | Gly | Ile | Tyr | Ser | Pro | Biniossek et al., 2016 | ||
| Pyruvate dehydrogenase E1 component | P0AFG8 | 285-301 | peptide-Val293+Met-peptide | N | MS | Val | Ile | Lys | Val | Met | Trp | Gly | Ser | Biniossek et al., 2016 | ||
| Pyruvate kinase I | P0AD61 | 43-71 | peptide-Ala61+Ala-peptide | N | MS | Gly | Lys | Thr | Ala | Ala | Ile | Leu | Leu | Biniossek et al., 2016 | ||
| Pyruvate kinase I | P0AD61 | 184-202 | peptide-Ala190+Ala-peptide | N | MS | Asp | Phe | Val | Ala | Ala | Ser | Phe | Ile | Biniossek et al., 2016 | ||
| Pyruvate kinase I | P0AD61 | 112-133 | peptide-Leu117+Ser-peptide | N | MS | Thr | Thr | Asp | Leu | Ser | Val | Gly | Asn | Biniossek et al., 2016 | ||
| Pyruvate kinase I | P0AD61 | 368-403 | peptide-Ala394+Thr-peptide | N | MS | Phe | Pro | Asp | Ala | Thr | Ile | Leu | Ala | Biniossek et al., 2016 | ||
| Pyruvate kinase I | P0AD61 | 436-1 | peptide-Ala443+His-peptide | N | MS | Ser | Gly | Leu | Ala | His | Lys | Gly | Asp | Biniossek et al., 2016 | ||
| Pyruvate kinase I | P0AD61 | 368-403 | peptide-Ala377+Thr-peptide | N | MS | Ile | Val | Val | Ala | Thr | Gln | Gly | Gly | Biniossek et al., 2016 | ||
| Pyruvate kinase II | P21599 | 2-25 | peptide-Leu14+Gly-peptide | N | MS | Val | Thr | Thr | Leu | Gly | Pro | Ala | Thr | Biniossek et al., 2016 | ||
| Pyruvate kinase II | P21599 | 412-440 | peptide-Gly422+Val-peptide | N | MS | Leu | Tyr | Arg | Gly | Val | Thr | Pro | Val | Biniossek et al., 2016 | ||
| Ribokinase | P0A9J6 | 30-71 | peptide-Ala59+Phe-peptide | N | MS | Ala | Asn | Ile | Ala | Phe | Ile | Ala | Cys | Biniossek et al., 2016 | ||
| Ribokinase | P0A9J6 | 108-126 | peptide-Ala114+Gly-peptide | N | MS | Gly | Ile | His | Ala | Gly | Ala | Asn | Ala | Biniossek et al., 2016 | ||
| Ribokinase | P0A9J6 | 1-29 | peptide-Gly11+Ser-peptide | N | MS | Val | Val | Leu | Gly | Ser | Ile | Asn | Ala | Biniossek et al., 2016 | ||
| Ribokinase | P0A9J6 | 237-267 | peptide-Ala247+Val-peptide | N | MS | Arg | Val | Gln | Ala | Val | Asp | Thr | Ile | Biniossek et al., 2016 | ||
| Ribonuclease E | P21513 | 439-454 | peptide-Ala441+Ile-peptide | N | MS | Glu | Val | His | Ala | Ile | Val | Pro | Val | Biniossek et al., 2016 | ||
| Ribonucleoside-diphosphate reductase 1 subunit beta | P69924 | 71-104 | peptide-Ala95+Leu-peptide | N | MS | Pro | Asn | Val | Ala | Leu | Leu | Pro | Leu | Biniossek et al., 2016 | ||
| Ribose import binding protein RbsB | P02925 | 1-51 | peptide-Ala30+Leu-peptide | N | MS | Asp | Thr | Ile | Ala | Leu | Val | Val | Ser | Biniossek et al., 2016 | ||
| Ribose import binding protein RbsB | P02925 | 1-51 | peptide-Leu31+Val-peptide | N | MS | Thr | Ile | Ala | Leu | Val | Val | Ser | Thr | Biniossek et al., 2016 | ||
| Ribose import binding protein RbsB | P02925 | 218-246 | peptide-Ala229+Gly-peptide | N | MS | Leu | Gln | Thr | Ala | Gly | Lys | Ser | Asp | Biniossek et al., 2016 | ||
| Ribose import binding protein RbsB | P02925 | 122-147 | peptide-Ser124+His-peptide | N | MS | Glu | Val | Val | Ser | His | Ile | Ala | Ser | Biniossek et al., 2016 | ||
| Ribose import binding protein RbsB | P02925 | 218-246 | peptide-Gly230+Lys-peptide | N | MS | Gln | Thr | Ala | Gly | Lys | Ser | Asp | Val | Biniossek et al., 2016 | ||
| Ribose import binding protein RbsB | P02925 | 169-217 | peptide-Leu201+Leu-peptide | N | MS | Met | Gln | Asn | Leu | Leu | Thr | Ala | His | Biniossek et al., 2016 | ||
| Ribose import binding protein RbsB | P02925 | 72-121 | peptide-Ala106+Asn-peptide | N | MS | Ala | Asn | Gln | Ala | Asn | Ile | Pro | Val | Biniossek et al., 2016 | ||
| Ribose import binding protein RbsB | P02925 | 169-217 | peptide-Gln199+Asn-peptide | N | MS | Asn | Val | Met | Gln | Asn | Leu | Leu | Thr | Biniossek et al., 2016 | ||
| Ribose import binding protein RbsB | P02925 | 247-271 | peptide-Ala259+Gln-peptide | N | MS | Ala | Thr | Ile | Ala | Gln | Leu | Pro | Asp | Biniossek et al., 2016 | ||
| Ribose import binding protein RbsB | P02925 | 169-217 | peptide-Met198+Gln-peptide | N | MS | Leu | Asn | Val | Met | Gln | Asn | Leu | Leu | Biniossek et al., 2016 | ||
| Ribose import binding protein RbsB | P02925 | 247-271 | peptide-Ala256+Thr-peptide | N | MS | Lys | Leu | Ala | Ala | Thr | Ile | Ala | Gln | Biniossek et al., 2016 | ||
| Ribose import binding protein RbsB | P02925 | 52-71 | peptide-Leu59+Val-peptide | N | MS | Gly | Tyr | Asn | Leu | Val | Val | Leu | Asp | Biniossek et al., 2016 | ||
| Ribose-5-phosphate isomerase A | P0A7Z0 | 184-219 | peptide-Ala199+Asn-peptide | N | MS | Gly | Leu | Phe | Ala | Asn | Arg | Gly | Ala | Biniossek et al., 2016 | ||
| Ribose-phosphate pyrophosphokinase | P0A717 | 134-154 | peptide-Gly137+Phe-peptide | N | MS | Gln | Ile | Gln | Gly | Phe | Phe | Asp | Val | Biniossek et al., 2016 | ||
| Ribose-phosphate pyrophosphokinase | P0A717 | 15-39 | peptide-Leu23+Tyr-peptide | N | MS | Ala | Asn | Arg | Leu | Tyr | Thr | Ser | Leu | Biniossek et al., 2016 | ||
| Ribosome-associated inhibitor A | P0AD49 | 12-28 | peptide-Gln18+His-peptide | N | MS | Ala | Ile | Arg | Gln | His | Val | Ala | Asp | Biniossek et al., 2016 | ||
| Ribosome-recycling factor | P0A805 | 19-43 | peptide-Gly39+Ile-peptide | N | MS | Leu | Leu | Asp | Gly | Ile | Val | Val | Glu | Biniossek et al., 2016 | ||
| Ribosome-recycling factor | P0A805 | 80-107 | peptide-Met83+Ala-peptide | N | MS | Lys | Ala | Ile | Met | Ala | Ser | Asp | Leu | Biniossek et al., 2016 | ||
| Ribosome-recycling factor | P0A805 | 61-79 | peptide-Leu65+Lys-peptide | N | MS | Ser | Arg | Thr | Leu | Lys | Ile | Asn | Val | Biniossek et al., 2016 | ||
| Ribosome-recycling factor | P0A805 | 80-107 | peptide-Ala84+Ser-peptide | N | MS | Ala | Ile | Met | Ala | Ser | Asp | Leu | Gly | Biniossek et al., 2016 | ||
| Ribosome-recycling factor | P0A805 | 44-60 | peptide-Ala55+Ser-peptide | N | MS | Arg | Gln | Leu | Ala | Ser | Val | Thr | Val | Biniossek et al., 2016 | ||
| Ribulokinase | P08204 | 265-310 | peptide-Gln306+Ser-peptide | N | MS | Ala | Asp | Lys | Gln | Ser | Val | Gly | Glu | Biniossek et al., 2016 | ||
| RNA-binding protein Hfq | P0A6X3 | 38-99 | peptide-Leu46+Lys-peptide | N | MS | Val | Ile | Leu | Leu | Lys | Asn | Thr | Val | Biniossek et al., 2016 | ||
| S-adenosylmethionine synthase | P0A817 | 152-192 | peptide-Ala183+Val-peptide | N | MS | Gly | Ile | Asp | Ala | Val | Val | Leu | Ser | Biniossek et al., 2016 | ||
| Septum site-determining protein MinD | P0AEZ3 | 127-138 | peptide-Ala129+Leu-peptide | N | MS | Glu | Thr | Gly | Ala | Leu | Met | Ala | Leu | Biniossek et al., 2016 | ||
| Serine endoprotease DegS | P0AEE3 | 76-115 | peptide-Asn94+Lys-peptide | N | MS | Ile | Ile | Thr | Asn | Lys | His | Val | Ile | Biniossek et al., 2016 | ||
| Serine hydroxymethyltransferase | P0A825 | 32-36 | peptide-Leu32+Ile-peptide | N | MS | His | Ile | Glu | Leu | Ile | Ala | Ser | Glu | Biniossek et al., 2016 | ||
| Serine hydroxymethyltransferase | P0A825 | 70-75 | peptide-Tyr70+Val-peptide | N | MS | Gly | Cys | Glu | Tyr | Val | Asp | Ile | Val | Biniossek et al., 2016 | ||
| Serine hydroxymethyltransferase | P0A825 | 85-111 | peptide-Ala101+Asn-peptide | N | MS | Gly | Ser | Gln | Ala | Asn | Phe | Ala | Val | Biniossek et al., 2016 | ||
| Serine hydroxymethyltransferase | P0A825 | 37-57 | peptide-Met44+Gln-peptide | N | MS | Pro | Arg | Val | Met | Gln | Ala | Gln | Gly | Biniossek et al., 2016 | ||
| Serine hydroxymethyltransferase | P0A825 | 37-57 | peptide-Ala46+Gln-peptide | N | MS | Val | Met | Gln | Ala | Gln | Gly | Ser | Gln | Biniossek et al., 2016 | ||
| Serine hydroxymethyltransferase | P0A825 | 112-159 | peptide-Ala149+Thr-peptide | N | MS | Gly | Ile | Asp | Ala | Thr | Gly | His | Ile | Biniossek et al., 2016 | ||
| Serine hydroxymethyltransferase | P0A825 | 112-159 | peptide-Leu139+Tyr-peptide | N | MS | Ser | Gly | Lys | Leu | Tyr | Asn | Ile | Val | Biniossek et al., 2016 | ||
| Serine hydroxymethyltransferase | P0A825 | 58-69 | peptide-Gly66+Gly-peptide | N | MS | Arg | Tyr | Tyr | Gly | Gly | Cys | Glu | Tyr | Biniossek et al., 2016 | ||
| Serine--tRNA ligase | P0A8L1 | 227-239 | peptide-Ala238+Glu-peptide | N | MS | Ile | Pro | Thr | Ala | Glu | Val | Pro | Leu | Biniossek et al., 2016 | ||
| Shikimate kinase 1 | P0A6D7 | 41-54 | peptide-Ala45+Asp-peptide | N | MS | Arg | Thr | Gly | Ala | Asp | Val | Gly | Trp | Biniossek et al., 2016 | ||
| Spermidine/putrescine-binding periplasmic protein | P0AFK9 | 270-289 | peptide-Phe277+Leu-peptide | N | MS | Leu | Ile | Asn | Phe | Leu | Leu | Arg | Pro | Biniossek et al., 2016 | ||
| Spermidine/putrescine-binding periplasmic protein | P0AFK9 | 159-171 | peptide-Gly161+Ser-peptide | N | MS | Glu | Tyr | Lys | Gly | Ser | Leu | Leu | Leu | Biniossek et al., 2016 | ||
| Spermidine/putrescine-binding periplasmic protein | P0AFK9 | 172-191 | peptide-Gly181+Tyr-peptide | N | MS | Arg | Lys | Leu | Gly | Tyr | Ser | Gly | Asn | Biniossek et al., 2016 | ||
| Stringent starvation protein A | P0ACA3 | 108-124 | peptide-Leu113+Met-peptide | N | MS | Trp | Tyr | Thr | Leu | Met | Asn | Thr | Ile | Biniossek et al., 2016 | ||
| Succinate--CoA ligase [ADP-forming] subunit alpha | P0AGE9 | 27-59 | peptide-Leu49+Gly-peptide | N | MS | Thr | Thr | His | Leu | Gly | Leu | Pro | Val | Biniossek et al., 2016 | ||
| Sulfate transport system permease protein CysW | P0AEB0 | 4-137 | peptide-Ala12+Arg-peptide | N | MS | Arg | Tyr | Asp | Ala | Arg | Pro | Ile | Asn | Biniossek et al., 2016 | ||
| Superoxide dismutase [Fe] | P0AGD3 | 5-22 | peptide-Ala14+Leu-peptide | N | MS | Ala | Lys | Asp | Ala | Leu | Ala | Pro | His | Biniossek et al., 2016 | ||
| Superoxide dismutase [Fe] | P0AGD3 | 62-88 | peptide-Cys80+Leu-peptide | N | MS | Tyr | Trp | Asn | Cys | Leu | Ala | Pro | Asn | Biniossek et al., 2016 | ||
| Superoxide dismutase [Fe] | P0AGD3 | 5-22 | peptide-Ala11+Lys-peptide | N | MS | Leu | Pro | Tyr | Ala | Lys | Asp | Ala | Leu | Biniossek et al., 2016 | ||
| Superoxide dismutase [Mn] | P00448 | 119-154 | peptide-Ala140+Val-peptide | N | MS | Asp | Lys | Leu | Ala | Val | Val | Ser | Thr | Biniossek et al., 2016 | ||
| Thiazole synthase | P30139 | 143-162 | peptide-Gly156+Ser-peptide | N | MS | Ala | Pro | Ile | Gly | Ser | Asn | Gln | Gly | Biniossek et al., 2016 | ||
| Thioredoxin 1 | P0AA25 | 32-45 | peptide-Met38+Ile-peptide | N | MS | Pro | Cys | Lys | Met | Ile | Ala | Pro | Ile | Biniossek et al., 2016 | ||
| Thiosulfate sulfurtransferase PspE | P23857 | 36-47 | peptide-Gly39+Ala-peptide | N | MS | His | Val | Gln | Gly | Ala | Ile | Asn | Ile | Biniossek et al., 2016 | ||
| Thymidine phosphorylase | P07650 | 223-255 | peptide-Asp241+Met-peptide | N | MS | Leu | Leu | Thr | Asp | Met | Asn | Gln | Val | Biniossek et al., 2016 | ||
| Toxin-antitoxin biofilm protein TabA | P0AF96 | 41-50 | peptide-Leu47+Ile-peptide | N | MS | Leu | Phe | Tyr | Leu | Ile | Ser | Glu | Asp | Biniossek et al., 2016 | ||
| Toxin-antitoxin biofilm protein TabA | P0AF96 | 23-31 | peptide-Ala26+His-peptide | N | MS | His | Ile | Lys | Ala | His | Val | Thr | Ala | Biniossek et al., 2016 | ||
| Transaldolase B | P0A870 | 220-232 | peptide-Met223+Gly-peptide | N | MS | Thr | Val | Val | Met | Gly | Ala | Ser | Phe | Biniossek et al., 2016 | ||
| Transcription termination factor Rho | P0AG30 | 57-106 | peptide-Leu65+Arg-peptide | N | MS | Phe | Gly | Phe | Leu | Arg | Ser | Ala | Asp | Biniossek et al., 2016 | ||
| Transcription termination factor Rho | P0AG30 | 227-234 | peptide-Ala229+Ser-peptide | N | MS | Glu | Val | Val | Ala | Ser | Thr | Phe | Asp | Biniossek et al., 2016 | ||
| Transcription termination factor Rho | P0AG30 | 398-414 | peptide-Ala404+Met-peptide | N | MS | Asn | Lys | Leu | Ala | Met | Thr | Lys | Thr | Biniossek et al., 2016 | ||
| Transcription termination/antitermination protein NusA | P0AFF6 | 352-367 | peptide-Ala354+Ala-peptide | N | MS | Glu | Ala | His | Ala | Ala | Ile | Asp | Thr | Biniossek et al., 2016 | ||
| Transcription termination/antitermination protein NusG | P0AFG0 | 133-149 | peptide-Gly146+Val-peptide | N | MS | Asp | Phe | Asn | Gly | Val | Val | Glu | Glu | Biniossek et al., 2016 | ||
| Transketolase 1 | P27302 | 231-269 | peptide-Ala255+Gly-peptide | N | MS | Pro | Asn | Lys | Ala | Gly | Thr | His | Asp | Biniossek et al., 2016 | ||
| Transketolase 1 | P27302 | 509-527 | peptide-Ala515+Leu-peptide | N | MS | Gly | Pro | Thr | Ala | Leu | Ile | Leu | Ser | Biniossek et al., 2016 | ||
| Transketolase 1 | P27302 | 575-598 | peptide-Ala578+Arg-peptide | N | MS | Gly | Val | Lys | Ala | Arg | Val | Val | Ser | Biniossek et al., 2016 | ||
| Transketolase 1 | P27302 | 648-661 | peptide-Ala657+Lys-peptide | N | MS | Asn | Val | Val | Ala | Lys | Ala | Lys | Glu | Biniossek et al., 2016 | ||
| Translation initiation factor IF-2 | P0A705 | 437-481 | peptide-Leu467+Val-peptide | N | MS | Ile | Val | Val | Leu | Val | Val | Ala | Ala | Biniossek et al., 2016 | ||
| Translation initiation factor IF-2 | P0A705 | 278-314 | peptide-Gly313+Glu-peptide | N | MS | Val | Val | Ile | Gly | Glu | Thr | Ile | Thr | Biniossek et al., 2016 | ||
| Translation initiation factor IF-2 | P0A705 | 820-839 | peptide-Val830+Leu-peptide | N | MS | Pro | Ile | Arg | Val | Leu | Arg | Asp | Asn | Biniossek et al., 2016 | ||
| Translation initiation factor IF-2 | P0A705 | 528-543 | peptide-Ala535+Lys-peptide | N | MS | His | Val | Ser | Ala | Lys | Ala | Gly | Thr | Biniossek et al., 2016 | ||
| Trehalose-6-phosphate hydrolase | P28904 | 366-383 | peptide-Met368+Thr-peptide | N | MS | Glu | Ile | Gly | Met | Thr | Asn | Pro | His | Biniossek et al., 2016 | ||
| Trigger factor | P0A850 | 132-153 | peptide-Ala149+Thr-peptide | N | MS | Lys | Gln | Gln | Ala | Thr | Trp | Lys | Glu | Biniossek et al., 2016 | ||
| Triosephosphate isomerase | P0A858 | 161-167 | peptide-Gly161+Ala-peptide | N | MS | Ala | Phe | Glu | Gly | Ala | Val | Ile | Ala | Biniossek et al., 2016 | ||
| Triosephosphate isomerase | P0A858 | 168-203 | peptide-Ala171+Ile-peptide | N | MS | Pro | Val | Trp | Ala | Ile | Gly | Thr | Gly | Biniossek et al., 2016 | ||
| tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG | P0A6U3 | 495-506 | peptide-Arg505+Glu-peptide | N | MS | Pro | Leu | Ser | Arg | Glu | Ala | Ser | Gly | Biniossek et al., 2016 | ||
| tRNA-modifying protein YgfZ | P0ADE8 | 196-233 | peptide-Ala218+Leu-peptide | N | MS | Asn | Leu | Gln | Ala | Leu | Gly | Gly | Ile | Biniossek et al., 2016 | ||
| tRNA-modifying protein YgfZ | P0ADE8 | 1-38 | peptide-Met22+Thr-peptide | N | MS | Leu | Thr | Leu | Met | Thr | Leu | Asp | Asp | Biniossek et al., 2016 | ||
| Tryptophan--tRNA ligase | P00954 | 230-260 | peptide-Ala241+Gly-peptide | N | MS | Gln | Asn | Lys | Ala | Gly | Val | Ser | Asn | Biniossek et al., 2016 | ||
| Tryptophanase | P0A853 | 45-72 | peptide-Phe47+Ile-peptide | N | MS | Glu | Asp | Val | Phe | Ile | Asp | Leu | Leu | Biniossek et al., 2016 | ||
| Tryptophanase | P0A853 | 121-157 | peptide-Tyr134+Phe-peptide | N | MS | Phe | Ser | Asn | Tyr | Phe | Phe | Asp | Thr | Biniossek et al., 2016 | ||
| Tryptophanase | P0A853 | 348-384 | peptide-Gly349+Val-peptide | N | MS | Glu | Glu | Ile | Gly | Val | Val | Cys | Gln | Biniossek et al., 2016 | ||
| Tryptophanase | P0A853 | 183-233 | peptide-Ala193+Thr-peptide | N | MS | Tyr | Ile | Val | Ala | Thr | Ile | Thr | Ser | Biniossek et al., 2016 | ||
| Tryptophanase | P0A853 | 30-44 | peptide-Leu41+Asp-peptide | N | MS | Pro | Phe | Leu | Leu | Asp | Ser | Glu | Asp | Biniossek et al., 2016 | ||
| Tryptophanase | P0A853 | 45-72 | peptide-Ala66+Met-peptide | N | MS | Met | Gln | Ala | Ala | Met | Met | Arg | Gly | Biniossek et al., 2016 | ||
| Tryptophanase | P0A853 | 45-72 | peptide-Ala65+Ala-peptide | N | MS | Ser | Met | Gln | Ala | Ala | Met | Met | Arg | Biniossek et al., 2016 | ||
| Tryptophanase | P0A853 | 45-72 | peptide-Met63+Gln-peptide | N | MS | Thr | Gln | Ser | Met | Gln | Ala | Ala | Met | Biniossek et al., 2016 | ||
| Tryptophanase | P0A853 | 45-72 | peptide-Ala58+Val-peptide | N | MS | Gly | Thr | Gly | Ala | Val | Thr | Gln | Ser | Biniossek et al., 2016 | ||
| Tryptophanase | P0A853 | 45-72 | peptide-Gly57+Ala-peptide | N | MS | Ser | Gly | Thr | Gly | Ala | Val | Thr | Gln | Biniossek et al., 2016 | ||
| Tryptophanase | P0A853 | 396-416 | peptide-Leu401+Gly-peptide | N | MS | Ser | Phe | Leu | Leu | Gly | Arg | Asp | Pro | Biniossek et al., 2016 | ||
| Tryptophanase | P0A853 | 348-384 | peptide-Ala360+Phe-peptide | N | MS | Gly | His | Ala | Ala | Phe | Val | Asp | Ala | Biniossek et al., 2016 | ||
| Tryptophanase | P0A853 | 257-293 | peptide-Met282+Lys-peptide | N | MS | Leu | Leu | Cys | Met | Lys | Asp | Asp | Ser | Biniossek et al., 2016 | ||
| Tryptophanase | P0A853 | 257-293 | peptide-Cys281+Met-peptide | N | MS | Gly | Leu | Leu | Cys | Met | Lys | Asp | Asp | Biniossek et al., 2016 | ||
| Tryptophanase | P0A853 | 107-118 | peptide-Ile114+Lys-peptide | N | MS | Pro | Val | Leu | Ile | Lys | Lys | Arg | Glu | Biniossek et al., 2016 | ||
| Tryptophanase | P0A853 | 317-346 | peptide-Ala336+Gln-peptide | N | MS | Tyr | Arg | Ile | Ala | Gln | Val | Gln | Tyr | Biniossek et al., 2016 | ||
| Tryptophanase | P0A853 | 396-416 | peptide-Gly402+Arg-peptide | N | MS | Phe | Leu | Leu | Gly | Arg | Asp | Pro | Lys | Biniossek et al., 2016 | ||
| Tryptophanase | P0A853 | 86-106 | peptide-Tyr95+Thr-peptide | N | MS | Gly | Tyr | Gln | Tyr | Thr | Ile | Pro | Thr | Biniossek et al., 2016 | ||
| Tryptophanase | P0A853 | 417-437 | peptide-Ala425+Thr-peptide | N | MS | Ile | Pro | Arg | Ala | Thr | Tyr | Thr | Gln | Biniossek et al., 2016 | ||
| Tryptophanase | P0A853 | 183-233 | peptide-Ala208+Asn-peptide | N | MS | Val | Ser | Leu | Ala | Asn | Leu | Lys | Ala | Biniossek et al., 2016 | ||
| Tryptophanase | P0A853 | 107-118 | peptide-Ile108+Tyr-peptide | N | MS | Ala | Glu | Gln | Ile | Tyr | Ile | Pro | Val | Biniossek et al., 2016 | ||
| Tryptophanase | P0A853 | 86-106 | peptide-Gly92+Tyr-peptide | N | MS | Asn | Ile | Phe | Gly | Tyr | Gln | Tyr | Thr | Biniossek et al., 2016 | ||
| Tryptophanase | P0A853 | 30-44 | peptide-Ser34+Gly-peptide | N | MS | Ile | Ile | Lys | Ser | Gly | Met | Asn | Pro | Biniossek et al., 2016 | ||
| Tryptophanase | P0A853 | 158-174 | peptide-Gly169+Asn-peptide | N | MS | Asp | Phe | Lys | Gly | Asn | Phe | Asp | Leu | Biniossek et al., 2016 | ||
| Tryptophanase | P0A853 | 10-17 | peptide-Ile13+Arg-peptide | N | MS | Pro | Phe | Arg | Ile | Arg | Val | Ile | Glu | Biniossek et al., 2016 | ||
| Tryptophanase | P0A853 | 348-384 | peptide-Ala364+Gly-peptide | N | MS | Phe | Val | Asp | Ala | Gly | Lys | Leu | Leu | Biniossek et al., 2016 | ||
| Tryptophanase | P0A853 | 234-242 | peptide-Ala235+Tyr-peptide | N | MS | Ala | Glu | Asn | Ala | Tyr | Phe | Ile | Lys | Biniossek et al., 2016 | ||
| Type-1 fimbrial protein, A chain | P04128 | 145-1 | peptide-Ala158+Arg-peptide | N | MS | Pro | Phe | Gln | Ala | Arg | Tyr | Phe | Ala | Biniossek et al., 2016 | ||
| Uncharacterized lipoprotein YedD | P31063 | 62-95 | peptide-Arg72+Val-peptide | N | MS | Gln | Trp | Gln | Arg | Val | Ile | Ala | Val | Biniossek et al., 2016 | ||
| Uncharacterized lipoprotein YjbH | P32689 | 237-260 | peptide-Asp251+Trp-peptide | N | MS | Arg | Val | Thr | Asp | Trp | Ala | Asp | Val | Biniossek et al., 2016 | ||
| Uncharacterized oxidoreductase YhhX | P46853 | 255-265 | peptide-Ala259+Asn-peptide | N | MS | Ser | Leu | Lys | Ala | Asn | Ile | Met | Pro | Biniossek et al., 2016 | ||
| Uncharacterized protein YcgB | P29013 | 2-31 | peptide-Trp20+Thr-peptide | N | MS | Gly | Pro | Asp | Trp | Thr | Phe | Asp | Leu | Biniossek et al., 2016 | ||
| Uncharacterized protein YecA | P0AD05 | 143-150 | peptide-Ala143+Ile-peptide | N | MS | Ala | Leu | Glu | Ala | Ile | Ala | Leu | His | Biniossek et al., 2016 | ||
| Uncharacterized protein YfeS | P78271 | 148-162 | peptide-Met157+Asp-peptide | N | MS | Tyr | Ile | Ala | Met | Asp | Ser | Ile | Leu | Biniossek et al., 2016 | ||
| Uncharacterized sulfatase YdeN | P77318 | 477-497 | peptide-Tyr494+Thr-peptide | N | MS | Ser | Leu | Val | Tyr | Thr | Val | Glu | Asn | Biniossek et al., 2016 | ||
| Universal stress protein A | P0AED0 | 1-15 | peptide-Ile6+Leu-peptide | N | MS | Tyr | Lys | His | Ile | Leu | Ile | Ala | Val | Biniossek et al., 2016 | ||
| Universal stress protein A | P0AED0 | 22-64 | peptide-Gly49+Leu-peptide | N | MS | Leu | Tyr | Thr | Gly | Leu | Ile | Asp | Val | Biniossek et al., 2016 | ||
| Universal stress protein E | P0AAC0 | 192-208 | peptide-Gly196+Ala-peptide | N | MS | His | Leu | Val | Gly | Ala | Tyr | Pro | Val | Biniossek et al., 2016 | ||
| Universal stress protein E | P0AAC0 | 153-165 | peptide-Ala159+Val-peptide | N | MS | Ala | Leu | Val | Ala | Val | Asn | Leu | Ala | Biniossek et al., 2016 | ||
| UPF0304 protein YfbU | P0A8W8 | 68-87 | peptide-Ala71+Leu-peptide | N | MS | Met | Tyr | His | Ala | Leu | His | Val | Ser | Biniossek et al., 2016 | ||
| UPF0381 protein YfcZ | P0AD33 | 9-39 | peptide-Ala28+Ser-peptide | N | MS | Asp | Cys | Thr | Ala | Ser | Tyr | Ser | Arg | Biniossek et al., 2016 | ||
| UPF0381 protein YiiS | P32162 | 76-87 | peptide-Ala78+Ala-peptide | N | MS | Glu | Leu | Asp | Ala | Ala | Phe | Thr | Phe | Biniossek et al., 2016 | ||
| Uracil phosphoribosyltransferase | P0A8F0 | 124-164 | peptide-Leu159+Val-peptide | N | MS | Val | Leu | Val | Leu | Val | Ala | Ala | Pro | Biniossek et al., 2016 | ||
| Uracil phosphoribosyltransferase | P0A8F0 | 63-89 | peptide-Ala79+Gly-peptide | N | MS | Ile | Leu | Arg | Ala | Gly | Leu | Gly | Met | Biniossek et al., 2016 | ||
| Uracil phosphoribosyltransferase | P0A8F0 | 178-189 | peptide-Ala181+Ser-peptide | N | MS | Leu | Tyr | Thr | Ala | Ser | Ile | Asp | Gln | Biniossek et al., 2016 | ||
| Uridine phosphorylase | P12758 | 199-227 | peptide-Ala217+Gly-peptide | N | MS | Gly | Met | Val | Ala | Gly | Val | Ile | Val | Biniossek et al., 2016 | ||
| Uridine phosphorylase | P12758 | 199-227 | peptide-Met205+Cys-peptide | N | MS | Leu | Leu | Thr | Met | Cys | Ala | Ser | Gln | Biniossek et al., 2016 | ||
| Uronate isomerase | P0A8G3 | 134-165 | peptide-Met149+Asn-peptide | N | MS | Met | Gln | Gln | Met | Asn | Val | Lys | Met | Biniossek et al., 2016 | ||
| USG-1 protein | P08390 | 189-207 | peptide-Ala196+Phe-peptide | N | MS | Arg | Gln | Leu | Ala | Phe | Asn | Met | Leu | Biniossek et al., 2016 | ||
| UTP--glucose-1-phosphate uridylyltransferase | P0AEP3 | 94-129 | peptide-Ala118+Val-peptide | N | MS | Leu | Gly | His | Ala | Val | Leu | Cys | Ala | Biniossek et al., 2016 | ||
| Xaa-Pro dipeptidase | P21165 | 106-134 | peptide-Gly124+Asn-peptide | N | MS | Ala | Ala | Arg | Gly | Asn | Ile | Gly | Tyr | Biniossek et al., 2016 |
