$VAR1 = undef;

Summary for peptidase S41.011: chlamydial protease-like activity factor

Names
MEROPS Name	chlamydial protease-like activity factor
Other names	chlamydial proteasome-like activity factor, CPAF

Domain architecture

MEROPS Classification
Classification	Clan SK >> Subclan (none) >> Family S41 >> Subfamily B >> S41.011
Holotype	chlamydial protease-like activity factor (Chlamydia trachomatis), Uniprot accession O84866 (peptidase unit: 400-565), MERNUM MER0037190
History	Identifier created: MEROPS 8.4 (6 April 2009)

Activity
Catalytic type	Serine
NC-IUBMB	Not yet included in IUBMB recommendations.
Cleavage site specificity	Explanations of how to interpret the following cleavage site sequence logo and specificity matrix can be found here.
Cleavage pattern	-/-/-/agl-/-/-/- (based on 700 cleavages)

Specificity matrix

Amino acid	P4	P3	P2	P1	P1'	P2'	P3'	P4'
Gly	71	32	20	114	55	22	59	52
Pro	53	21	13	1	1	8	80	38
Ala	69	48	53	286	66	76	63	79
Val	40	88	70	10	65	145	52	77
Leu	58	92	55	82	90	69	49	75
Ile	31	65	65	12	45	96	42	34
Met	8	15	7	56	27	12	15	9
Phe	22	39	16	32	43	32	22	16
Tyr	26	46	15	17	24	25	13	15
Trp	6	4	8	5	7	8	8	8
Ser	38	24	32	36	33	26	46	30
Thr	44	38	55	5	46	55	46	48
Cys	3	8	6	4	6	6	7	3
Asn	27	29	41	6	37	24	42	44
Gln	38	35	43	15	39	13	27	32
Asp	36	12	38	9	19	16	44	55
Glu	48	11	23	0	10	7	28	27
Lys	25	48	64	1	42	34	23	21
Arg	38	32	50	7	29	17	18	16
His	19	13	26	2	16	9	16	21