Structure for darunavir (A02.001 inhibitor)

Summary Structure Literature

 

TERTIARY STRUCTURE DATA
Comment Resolution PDB PDBe SCOP CATH PDBSum Proteopedia Reference
feline immunodeficiency virus retropepsin ( feline immunodeficiency virus)
complex with darunavir 1.70 Å 3OGP 3OGP 3OGP 3OGP 3OGP 3OGP
HIV-1 retropepsin ( human immunodeficiency virus 1)
complex with TMC114 inhibitor 1.20 Å 1T3R 1T3R 1T3R 1T3R 1T3R 1T3R Surleraux et al., 2005
Asp30Asn mutant; complex with inhibitor TMC114 1.45 Å 2F80 2F80 2F80 2F80 2F80 2F80
Leu90Met mutant; complex with inhibitor TMC114 1.25 Å 2F81 2F81 2F81 2F81 2F81 2F81
Ile50Val mutant; complex with inhibitor TMC114 1.22 Å 2F8G 2F8G 2F8G 2F8G 2F8G 2F8G
effect of flap mutations inhibition by saquinavir and darunavir 1.40 Å 3CYW 3CYW 3CYW 3CYW 3CYW 3CYW
Ile54Met mutant; complex with inhibitor darunavir 1.30 Å 3D1Z 3D1Z 3D1Z 3D1Z 3D1Z 3D1Z
multi-drug resistant variant (Leu10Phe/Gly48Val/Ile54Val/Val64Ile/Val82Ala); complex with darunavir (drv) 1.97 Å 3EKT 3EKT 3EKT 3EKT 3EKT 3EKT
Ile50Leu/Ala71val mutant; complex with inhibitor darunavir 2.10 Å 3EM6 3EM6 3EM6 3EM6 3EM6 3EM6
complex with darunavir 1.95 Å 3LZS 3LZS 3LZS 3LZS 3LZS 3LZS
nelfinavir resistant variant (Asn88Ser); complex with the protease inhibitor darunavir. 1.76 Å 3LZU 3LZU 3LZU 3LZU 3LZU 3LZU
nelfinavir-resistant variant (Asp30Asn/Asn88Asp); complex with darunavir. 2.15 Å 3LZV 3LZV 3LZV 3LZV 3LZV 3LZV
Ile50Val/Ala71Val variant; complex with the protease inhibitor darunavir 1.95 Å 3OXW 3OXW 3OXW 3OXW 3OXW 3OXW
Leu76Val variant; complex with the protease inhibitor darunavir. 1.76 Å 3OY4 3OY4 3OY4 3OY4 3OY4 3OY4
triple mutant Val32Ile/Ile47Val/Val82Ile; complex with antiviral drug darunavir in space group p212121 1.50 Å 3S53 3S53 3S53 3S53 3S53 3S53
triple mutant Val32Ile/Ile47Val/Val82Ile; complex with antiviral drug darunavir in space group p21212 1.42 Å 3S54 3S54 3S54 3S54 3S54 3S54
wild-type; complex with darunavir 1.95 Å 4LL3 4LL3 4LL3 4LL3 4LL3 4LL3
multidrug-resistant clinical isolate; complex with darunavir 1.95 Å 4NJT 4NJT 4NJT 4NJT 4NJT 4NJT
triple mutant (Val32Ile/Ile47Val/Val82Ile); complex with darunavir at ph 6.0 1.85 Å 5E5J 5E5J 5E5J 5E5J 5E5J 5E5J
nl4-3 wt; complex with darunavir 2.00 Å 6DGX 6DGX 6DGX 6DGX 6DGX 6DGX
nl4-3 v82i mutant; complex with darunavir 1.91 Å 6DH3 6DH3 6DH3 6DH3 6DH3 6DH3
nl4-3 i50v mutant; complex with darunavir 1.97 Å 6DH6 6DH6 6DH6 6DH6 6DH6 6DH6
HIV-2 retropepsin ( human immunodeficiency virus 2)
complex with clinical drug darunavir 1.20 Å 3EBZ 3EBZ 3EBZ 3EBZ 3EBZ 3EBZ