gamma proteobacterium HIMB55

Taxonomy
Taxonomy database identifier: 745014
Superkingdom Bacteria
Phylum Proteobacteria
Class Gammaproteobacteria
Common Name gamma proteobacterium HIMB55
Peptidase View peptidase sequences from gamma proteobacterium HIMB55
Count of known and putative peptidases: 41, non-peptidase homologues 9
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AA A32 unassigned family A32 unassigned peptidases MER0234667 OMB55_00020670
AC A8 unassigned family A8 unassigned peptidases MER0324587
AD A24 A24.001 type 4 prepilin peptidase 1 MER0260972 OMB55_00015970
CA C39 unassigned family C39 unassigned peptidases MER0446066
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0335203 OMB55_00013180
MA M41 M41.001 FtsH peptidase MER0300725
MA M48 M48.002 HtpX peptidase MER0296248 htpX OMB55_00004890
MA M48 unassigned subfamily M48A unassigned peptidases MER0295750 OMB55_00019110
MA M48 unassigned subfamily M48C unassigned peptidases MER0889340 OMB55_00021310
MA M48 unassigned subfamily M48C unassigned peptidases MER0886933 OMB55_00000650
MA M48 unassigned subfamily M48C unassigned peptidases MER0888771 OMB55_00003290
MC M14 non-peptidase homologue subfamily M14B non-peptidase homologues MER0469113
MC M14 non-peptidase homologue family M14 non-peptidase homologues MER0836100 OMB55_00020250
MD M15 unassigned subfamily M15B unassigned peptidases MER0837340 OMB55_00017270
MD M15 unassigned subfamily M15D unassigned peptidases MER0312437 OMB55_00005670
ME M16 unassigned subfamily M16A unassigned peptidases MER0314957 OMB55_00003320
ME M16 unassigned subfamily M16C unassigned peptidases MER0316377 OMB55_00013940
MF M17 unassigned family M17 unassigned peptidases MER0289531 pepA OMB55_00008380
MF M17 unassigned family M17 unassigned peptidases MER0340431 OMB55_00013740
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0318907 map OMB55_00015420
MG M24 M24.004 aminopeptidase P (bacteria) MER0319186 OMB55_00021820
MG M24 unassigned subfamily M24B unassigned peptidases MER0482639
MG M24 unassigned subfamily M24B unassigned peptidases MER0482640
MH M20 M20.974 acetylornithine deacetylase ArgE MER0854799 OMB55_00013340
MH M20 unassigned subfamily M20A unassigned peptidases MER0302869
MH M20 unassigned subfamily M20A unassigned peptidases MER0473144
MH M20 unassigned family M20D unassigned peptidases MER0374799 OMB55_00006460
MH M20 unassigned family M20D unassigned peptidases MER0304212 OMB55_00007670
MH M20 unassigned family M20D unassigned peptidases MER0373393 OMB55_00012960
MH M20 unassigned family M20 unassigned peptidases MER0851572 OMB55_00019640
MH M28 unassigned subfamily M28D unassigned peptidases MER0195437 OMB55_00010590
MJ M19 non-peptidase homologue family M19 non-peptidase homologues MER0341727 OMB55_00007580
MJ M19 unassigned family M19 unassigned peptidases MER0341573 OMB55_00002320
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0873962 OMB55_00007470
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0864106 OMB55_00007970
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0870293 OMB55_00008830
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0871479 OMB55_00010820
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0874358 OMB55_00004480
MM M50 unassigned subfamily M50B unassigned peptidases MER0890918 OMB55_00015340
MO M23 M23.014 ShyA D,D-endopeptidase (Vibrio cholerae) MER0314372 OMB55_00000570
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0389646 OMB55_00007940
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0389029 OMB55_00015210
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0479725
MO M23 unassigned subfamily M23B unassigned peptidases MER0388438 OMB55_00016020
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0327215
PA S1 non-peptidase homologue subfamily S1B non-peptidase homologues MER0964234 OMB55_00016320
PA S1 unassigned subfamily S1C unassigned peptidases MER0406723
PA S1 unassigned subfamily S1E unassigned peptidases MER0407719
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0456950
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0456951
PB S45 S45.002 cephalosporin acylase precursor MER0312236 OMB55_00006410
PB S45 S45.004 acyl-homoserine lactone acylase MER1063313 OMB55_00020840
PB T2 unassigned family T2 unassigned peptidases MER1096695 OMB55_00007980
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0307185 OMB55_00000800
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0379520 OMB55_00007750
PC C26 C26.957 GMP synthase MER0443504
PC C26 C26.959 TRP3 protein MER0436624
PC C26 C26.964 CTP synthetase MER0448796
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0445304
PC C26 unassigned family C26 unassigned peptidases MER0440857
PC C26 unassigned family C26 unassigned peptidases MER0449270
PE T5 T05.001 ornithine acetyltransferase precursor MER0307727 argJ OMB55_00016000
SB S8 unassigned subfamily S8A unassigned peptidases MER0975223 OMB55_00023990
SB S8 unassigned subfamily S8A unassigned peptidases MER0970735 OMB55_00004520
SB S8 unassigned subfamily S8A unassigned peptidases MER0968368 OMB55_00004530
SC S9 S09.071 trilobed protease MER0328996 OMB55_00006620
SC S9 unassigned subfamily S9A unassigned peptidases MER0325876
SC S9 unassigned subfamily S9A unassigned peptidases MER0326560
SC S9 unassigned subfamily S9B unassigned peptidases MER0490867 OMB55_00021940
SC S9 unassigned subfamily S9B unassigned peptidases MER0404322
SC S9 unassigned subfamily S9C unassigned peptidases MER0326598
SC S33 S33.001 prolyl aminopeptidase MER0307798 OMB55_00020450
SE S11 unassigned family S11 unassigned peptidases MER0351078 OMB55_00018350
SE S12 unassigned family S12 unassigned peptidases MER0999025 OMB55_00006610
SE S12 unassigned family S12 unassigned peptidases MER1009183 OMB55_00018080
SE S12 unassigned family S12 unassigned peptidases MER1011947 OMB55_00009740
SE S12 unassigned family S12 unassigned peptidases MER1011169 OMB55_00020580
SE S12 unassigned family S12 unassigned peptidases MER1008065 OMB55_00004580
SE S12 unassigned family S12 unassigned peptidases MER1011184 OMB55_00004840
SE S12 unassigned family S12 unassigned peptidases MER0355983 OMB55_00005350
SE S12 unassigned family S12 unassigned peptidases MER0355134 OMB55_00010720
SE S12 unassigned family S12 unassigned peptidases MER0354939 OMB55_00015070
SE S12 unassigned family S12 unassigned peptidases MER0355064 OMB55_00020740
SF S24 S24.001 repressor LexA MER0304468 lexA OMB55_00009450
SF S26 S26.001 signal peptidase I MER0266057 OMB55_00008580
SJ S16 S16.001 Lon-A peptidase MER0299797
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0476543
SK S14 S14.001 peptidase Clp (type 1) MER0299193
SK S41 S41.001 C-terminal processing peptidase-1 MER0288597 OMB55_00010140
SK S41 S41.004 C-terminal processing peptidase-3 MER0338031 OMB55_00024120
SK S41 S41.012 Pep putative peptidase (Vibrio-type) MER1057362 OMB55_00013560
SK S49 unassigned subfamily S49B unassigned peptidases MER1068566 OMB55_00010180
SK S49 unassigned subfamily S49B unassigned peptidases MER0300151 OMB55_00015590
SS S66 S66.001 murein tetrapeptidase LD-carboxypeptidase (Pseudomonas-type) MER0320168 OMB55_00005680
ST S54 unassigned family S54 unassigned peptidases MER1076049 OMB55_00013210

GENOME ANALYSIS: Comparison with 841 completely sequenced genomes from class Gammaproteobacteria
Family Comment
A32 significant presence (1 homologues)
T5 significant presence (1 homologues)