Saccharopolyspora spinosa

Taxonomy
Taxonomy database identifier: 60894
Superkingdom		Bacteria
Phylum		Firmicutes
Class		Actinobacteria
Subclass		Actinobacteridae
Order		Actinomycetales
Suborder		Pseudonocardineae
Family		Pseudonocardiaceae
Genus		Saccharopolyspora
Species		spinosa
Peptidase			View peptidase sequences from Saccharopolyspora spinosa
Count of known and putative peptidases: 52, non-peptidase homologues 15
Completely sequences genomes from subspecies and strains				Protein coding genes
	To show all strains with completely sequenced genomes, click here.

Clan	Family	MEROPS ID	Peptidase or homologue (subtype)	MERNUM	Gene	Locus
A-	A39	non-peptidase homologue	family A39 non-peptidase homologues	MER1371456
A-	A39	non-peptidase homologue	family A39 non-peptidase homologues	MER1374735
AC	A8	unassigned	family A8 unassigned peptidases	MER0401499
AD	A24	unassigned	subfamily A24A unassigned peptidases	MER0427235		SspiN1_25127
AD	A24	unassigned	subfamily A24A unassigned peptidases	MER0427236		SspiN1_27219
AE	A31	unassigned	family A31 unassigned peptidases	MER0427737
CL	C82	unassigned	subfamily C82A unassigned peptidases	MER0463897
CL	C82	unassigned	subfamily C82A unassigned peptidases	MER0463898
CO	C40	C40.007	YddH peptidase	MER0377428
CO	C40	C40.007	YddH peptidase	MER0454124
CO	C40	non-peptidase homologue	family C40 non-peptidase homologues	MER0378308
MA	M1	M01.012	aminopeptidase G	MER0334884
MA	M1	M01.032	lysyl aminopeptidase 1 (Streptomyces sp.)	MER0336002
MA	M7	unassigned	family M7 unassigned peptidases	MER0288083
MA	M41	M41.015	MsFtsH g.p. (Mycobacterium smegmatis)	MER0362786
MA	M48	unassigned	subfamily M48B unassigned peptidases	MER0348965
MC	M14	M14.007	carboxypeptidase T	MER0382126
MC	M14	unassigned	family M14 unassigned peptidases	MER0469129
MD	M15	M15.001	zinc D-Ala-D-Ala carboxypeptidase (Streptomyces-type)	MER0311612
ME	M16	non-peptidase homologue	subfamily M16B non-peptidase homologues	MER0392813
ME	M16	non-peptidase homologue	family M16 non-peptidase homologues	MER0470928
ME	M16	unassigned	subfamily M16B unassigned peptidases	MER0315674
MF	M17	unassigned	family M17 unassigned peptidases	MER0339832
MF	M17	unassigned	family M17 unassigned peptidases	MER0339819
MG	M24	M24.A06	At4g37040 (Arabidopsis thaliana)-type peptidase	MER0394265
MG	M24	non-peptidase homologue	subfamily M24B non-peptidase homologues	MER0483973
MG	M24	non-peptidase homologue	subfamily M24B non-peptidase homologues	MER0483976
MG	M24	non-peptidase homologue	family M24 non-peptidase homologues	MER0483974
MG	M24	unassigned	subfamily M24A unassigned peptidases	MER0395519
MG	M24	unassigned	subfamily M24A unassigned peptidases	MER0395613
MG	M24	unassigned	subfamily M24A unassigned peptidases	MER0395192
MG	M24	unassigned	subfamily M24B unassigned peptidases	MER0483975
MG	M24	unassigned	subfamily M24B unassigned peptidases	MER0396295
MH	M20	non-peptidase homologue	subfamily M20A non-peptidase homologues	MER0370031
MH	M20	non-peptidase homologue	subfamily M20D non-peptidase homologues	MER0374388
MH	M20	non-peptidase homologue	family M20 non-peptidase homologues	MER0369676
MH	M20	unassigned	family M20D unassigned peptidases	MER0372651
MH	M20	unassigned	family M20D unassigned peptidases	MER0371822
MH	M20	unassigned	family M20D unassigned peptidases	MER0373207
MH	M20	unassigned	family M20D unassigned peptidases	MER0374735
MH	M20	unassigned	family M20 unassigned peptidases	MER0369278
MH	M28	unassigned	subfamily M28A unassigned peptidases	MER0191611
MH	M28	unassigned	subfamily M28B unassigned peptidases	MER0195842
MH	M28	unassigned	subfamily M28F unassigned peptidases	MER1245874
MJ	M19	non-peptidase homologue	family M19 non-peptidase homologues	MER0341734
MJ	M19	unassigned	family M19 unassigned peptidases	MER0290283
MJ	M38	M38.982	urease	MER0862706	ureC
MN	M55	unassigned	family M55 unassigned peptidases	MER0306051
MO	M23	non-peptidase homologue	subfamily M23B non-peptidase homologues	MER0479858
MO	M23	unassigned	subfamily M23B unassigned peptidases	MER0387751
MO	M23	unassigned	subfamily M23B unassigned peptidases	MER0387455
MO	M23	unassigned	subfamily M23B unassigned peptidases	MER0388803
MO	M23	unassigned	subfamily M23B unassigned peptidases	MER0388959
PA	S1	S01.102	trypsin (Streptomyces erythraeus-type)	MER0367134
PA	S1	S01.102	trypsin (Streptomyces erythraeus-type)	MER0487120
PA	S1	S01.102	trypsin (Streptomyces erythraeus-type)	MER0367216
PA	S1	S01.412	CHY1 peptidase (Metarhizium anisopliae)	MER0301682
PA	S1	unassigned	subfamily S1A unassigned peptidases	MER0487121
PA	S1	unassigned	subfamily S1A unassigned peptidases	MER0487122
PA	S1	unassigned	subfamily S1E unassigned peptidases	MER0407669
PB	C44	C44.001	amidophosphoribosyltransferase precursor	MER0456739
PB	C44	C44.003	glutamate synthase (NADPH) large chain	MER0459908
PB	C44	C44.003	glutamate synthase (NADPH) large chain	MER0459910
PB	C44	non-peptidase homologue	family C44 non-peptidase homologues	MER0459911
PB	C44	non-peptidase homologue	family C44 non-peptidase homologues	MER0456740
PB	C44	unassigned	family C44 unassigned peptidases	MER0459907
PB	C44	unassigned	family C44 unassigned peptidases	MER0459909
PB	C59	unassigned	family C59 unassigned peptidases	MER0411092
PB	S45	S45.001	penicillin G acylase precursor	MER0312324
PB	S45	S45.003	cephalosporin C acylase precursor	MER0312064
PB	T1	T01.005	bacterial proteasome, beta component	MER0466685
PB	T3	T03.014	gamma-glutamyltransferase 2 (bacterial)	MER0380110
PC	C26	C26.959	TRP3 protein	MER0439033
PC	C26	C26.959	TRP3 protein	MER0438598
PC	C26	C26.964	CTP synthetase	MER0451138	pyrG
PC	C26	C26.965	imidazole glycerol phosphate synthase subunit HisH	MER0446774
PC	C26	C26.A07	At1g63660 (Arabidopsis thaliana)	MER0443439	guaA
PC	C26	C26.A25	trp1 (Schizosaccharomyces pombe)	MER0439069
PC	C26	C26.A25	trp1 (Schizosaccharomyces pombe)	MER0439258
PC	C26	C26.A32	imidazoleglycerol-phosphate synthase (Pyrococcus furiosus)	MER0451607
PC	C26	unassigned	family C26 unassigned peptidases	MER0451911
PC	C26	unassigned	family C26 unassigned peptidases	MER0448967
PC	C26	unassigned	family C26 unassigned peptidases	MER0450818
PC	C26	unassigned	family C26 unassigned peptidases	MER0443628
PC	C26	unassigned	family C26 unassigned peptidases	MER0448381
PC	C56	C56.001	PfpI peptidase	MER0385136
PC	S51	S51.002	alpha-aspartyl dipeptidase (eukaryote)	MER0314015
PE	T5	unassigned	family T5 unassigned peptidases	MER0380775	argJ
SB	S8	S08.050	secreted peptidase A	MER0401803		SspiN1_010100031360
SB	S8	non-peptidase homologue	subfamily S8A non-peptidase homologues	MER1282793
SB	S8	unassigned	subfamily S8A unassigned peptidases	MER0324832
SC	S9	S09.076	prolyl oligopeptidase (Myxococcus xanthus)	MER0325966
SC	S9	S09.A77	dpf-6 g.p. (Caenorhabditis elegans)	MER0490656
SC	S9	unassigned	subfamily S9A unassigned peptidases	MER1000614
SC	S9	unassigned	subfamily S9A unassigned peptidases	MER0405069
SC	S9	unassigned	subfamily S9B unassigned peptidases	MER0490655
SC	S9	unassigned	family S9 unassigned peptidases	MER0477847
SC	S9	unassigned	family S9 unassigned peptidases	MER0490657
SC	S10	unassigned	family S10 unassigned peptidases	MER0490658
SC	S15	unassigned	family S15 unassigned peptidases	MER1323363
SC	S15	unassigned	family S15 unassigned peptidases	MER0480170
SC	S15	unassigned	family S15 unassigned peptidases	MER0299517
SC	S15	unassigned	family S15 unassigned peptidases	MER0299561
SC	S28	unassigned	family S28 unassigned peptidases	MER0309197
SE	S12	unassigned	family S12 unassigned peptidases	MER0298105
SE	S12	unassigned	family S12 unassigned peptidases	MER0353976
SE	S12	unassigned	family S12 unassigned peptidases	MER0355211
SE	S12	unassigned	family S12 unassigned peptidases	MER0353948
SE	S12	unassigned	family S12 unassigned peptidases	MER0354978
SE	S12	unassigned	family S12 unassigned peptidases	MER0356215
SE	S13	S13.002	D-Ala-D-Ala carboxypeptidase (Actinomadura-type)	MER0298552
SE	S13	unassigned	family S13 unassigned peptidases	MER1315525
SE	S13	unassigned	family S13 unassigned peptidases	MER0356866
SF	S24	S24.001	repressor LexA	MER0304600
SF	S24	S24.001	repressor LexA	MER0375634
SF	S24	unassigned	family S24 unassigned peptidases	MER1330940
SF	S26	S26.024	signal peptidase (Mycobacterium tuberculosis-type)	MER0414807
SJ	S16	S16.012	SepM peptidase (Streptococcus mutans)	MER0473352
SJ	S16	S16.A04	DNA repair protein RadA (Escherichia coli)	MER0474564
SK	S14	S14.008	ClpP1 peptidase (Streptomyces-type)	MER0358629
SK	S14	S14.009	ClpP2 peptidase (Streptomyces-type)	MER0359052
SS	S66	S66.001	murein tetrapeptidase LD-carboxypeptidase (Pseudomonas-type)	MER0320122
U-	U72	U72.001	Dop isopeptidase	MER0400109
U-	U72	U72.001	Dop isopeptidase	MER0400038

GENOME ANALYSIS: Comparison with 39 completely sequenced genomes from family Pseudonocardiaceae
Family	Comment
C26	lineage specific expansion (13 homologues)
C40	significant decrease in homologues (3 homologues)
C59	significant presence (1 homologues)
M7	significant presence (1 homologues)
M19	significant presence (2 homologues)
M24	lineage specific expansion (9 homologues)
M38	significant decrease in homologues (1 homologues)
M55	significant presence (1 homologues)
S28	significant presence (1 homologues)
S51	significant presence (1 homologues)
T1	significant decrease in homologues (1 homologues)