Vibrio caribbenthicus

Taxonomy
Taxonomy database identifier: 909213
Superkingdom		Bacteria
Phylum		Proteobacteria
Class		Gammaproteobacteria
Order		Vibrionales
Family		Vibrionaceae
Genus		Vibrio
Species		caribbenthicus
Peptidase			View peptidase sequences from Vibrio caribbenthicus
Count of known and putative peptidases: 56, non-peptidase homologues 9
Completely sequences genomes from subspecies and strains				Protein coding genes
	To show all strains with completely sequenced genomes, click here.

Clan	Family	MEROPS ID	Peptidase or homologue (subtype)	MERNUM	Gene	Locus
AC	A8	A08.001	signal peptidase II	MER0229647	lspA	VIBC2010_02765
AD	A24	A24.001	type 4 prepilin peptidase 1	MER0260995		VIBC2010_01683
CA	C39	C39.005	colicin V processing peptidase	MER0302452
CD	C80	unassigned	family C80 unassigned peptidases	MER0321681
CL	C82	C82.A01	LdtF protein (Escherichia coli)	MER0462386
CL	C82	C82.A03	YnhG protein (Escherichia coli)	MER0463805		VIBC2010_07174
CO	C40	C40.006	PgpA peptidase	MER0378243		VIBC2010_10407
CO	C40	non-peptidase homologue	family C40 non-peptidase homologues	MER0452668
MA	M1	M01.005	alanyl aminopeptidase (bacterial-type)	MER0335844	pepN	VIBC2010_10132
MA	M3	M03.004	oligopeptidase A	MER0233730		VIBC2010_05534
MA	M4	M04.003	vibriolysin	MER0336677		VIBC2010_11361
MA	M4	M04.003	vibriolysin	MER0336679		VIBC2010_11814
MA	M4	M04.003	vibriolysin	MER0336624		VIBC2010_14054
MA	M4	M04.020	pap6 peptidase	MER0336692		VIBC2010_11854
MA	M6	M06.002	PrtV peptidase	MER0232823		VIBC2010_04829
MA	M41	M41.001	FtsH peptidase	MER0277297	ftsH	VIBC2010_01968
MA	M48	M48.002	HtpX peptidase	MER0296071	htpX	VIBC2010_08543
MA	M72	unassigned	family M72 unassigned peptidases	MER0312823		VIBC2010_17809
MA	M85	unassigned	family M85 unassigned peptidases	MER0195392		VIBC2010_17934
MC	M14	non-peptidase homologue	subfamily M14B non-peptidase homologues	MER0469006
MC	M14	non-peptidase homologue	subfamily M14B non-peptidase homologues	MER0468846
MC	M14	unassigned	subfamily M14D unassigned peptidases	MER0279558		VIBC2010_17410
MD	M15	unassigned	family M15 unassigned peptidases	MER0469562
MD	M74	M74.001	murein endopeptidase	MER0313033	mepA	VIBC2010_10791
ME	M16	unassigned	subfamily M16A unassigned peptidases	MER0315047		VIBC2010_13924
ME	M16	unassigned	subfamily M16B unassigned peptidases	MER0392007		VIBC2010_02698
ME	M16	unassigned	subfamily M16B unassigned peptidases	MER0390341		VIBC2010_11196
MF	M17	M17.003	PepA aminopeptidase	MER0289684	pepA	VIBC2010_15692
MF	M17	M17.004	PepB aminopeptidase	MER0340507		VIBC2010_10651
MG	M24	M24.001	methionyl aminopeptidase 1 (Escherichia-type)	MER0319071	map	VIBC2010_14439
MG	M24	M24.009	aminopeptidase P1	MER0482296
MH	M20	M20.007	Xaa-His dipeptidase	MER0303550
MH	M20	unassigned	subfamily M20A unassigned peptidases	MER0369994	argE	VIBC2010_03447
MH	M20	unassigned	subfamily M20A unassigned peptidases	MER0473980
MH	M28	M28.002	aminopeptidase Ap1	MER0201953		VIBC2010_18419
MJ	M19	unassigned	family M19 unassigned peptidases	MER0341768		VIBC2010_01079
MO	M23	M23.011	YebA peptidase	MER0387858		VIBC2010_13719
MO	M23	M23.014	ShyA D,D-endopeptidase (Vibrio cholerae)	MER0388025		VIBC2010_01923
MO	M23	non-peptidase homologue	subfamily M23B non-peptidase homologues	MER0479551
MO	M23	non-peptidase homologue	subfamily M23B non-peptidase homologues	MER0477687		VIBC2010_01623
MO	M23	unassigned	subfamily M23B unassigned peptidases	MER0314416		VIBC2010_03847
MS	M75	M75.001	imelysin	MER0313144		VIBC2010_12474
MU	M103	M103.001	TldD peptidase (Escherichia coli)	MER0332575		VIBC2010_15587
MU	M103	M103.UNW	family M103 non-peptidase homologues	MER0238565		VIBC2010_08113
NB	N6	N06.001	YscU protein	MER0326806
NB	N6	N06.003	EscU protein (Escherichia coli)	MER0326821
NB	N6	N06.A01	FlhB protein (Escherichia coli)	MER0405395
NB	N6	N06.A01	FlhB protein (Escherichia coli)	MER0405528	flhB
PA	S1	S01.515	VesA peptidase (Vibrio cholerae)	MER0487088
PA	S1	S01.518	VvpS peptidase (Vibrio vulnificus)	MER0487086
PA	S1	S01.518	VvpS peptidase (Vibrio vulnificus)	MER0487087
PA	S1	unassigned	subfamily S1A unassigned peptidases	MER0487089
PA	S1	unassigned	subfamily S1C unassigned peptidases	MER0327561		VIBC2010_18960
PB	C44	C44.001	amidophosphoribosyltransferase precursor	MER0454686
PB	C44	non-peptidase homologue	family C44 non-peptidase homologues	MER0456448
PB	C44	non-peptidase homologue	family C44 non-peptidase homologues	MER0459609	asnB
PB	C44	unassigned	family C44 unassigned peptidases	MER0459608
PB	T1	T01.006	HslV component of HslUV peptidase	MER0323498
PB	T3	T03.001	gamma-glutamyltransferase 1 (bacterial-type)	MER0239095		VIBC2010_05569
PB	T3	T03.001	gamma-glutamyltransferase 1 (bacterial-type)	MER0379147		VIBC2010_13441
PC	C26	C26.955	aminodeoxychorismate synthase, subunit II	MER0436369
PC	C26	C26.957	GMP synthase	MER0441913	guaA
PC	C26	C26.960	TrpD protein (anthranilate synthase component II)	MER0440032
PC	C26	C26.964	CTP synthetase	MER0447941	pyrG
PC	C26	C26.965	imidazole glycerol phosphate synthase subunit HisH	MER0446226	hisH
PC	C26	unassigned	family C26 unassigned peptidases	MER0443818
PC	C26	unassigned	family C26 unassigned peptidases	MER0440753
PC	C56	non-peptidase homologue	family C56 non-peptidase homologues	MER0385862		VIBC2010_17594
SB	S8	S08.050	secreted peptidase A	MER0325002
SC	S9	unassigned	subfamily S9A unassigned peptidases	MER0237502		VIBC2010_01059
SE	S11	unassigned	family S11 unassigned peptidases	MER0351231		VIBC2010_09127
SE	S13	S13.001	D-Ala-D-Ala peptidase C	MER0237592		VIBC2010_01943
SF	S24	S24.001	repressor LexA	MER0238960	lexA	VIBC2010_04379
SF	S26	S26.001	signal peptidase I	MER0264483		VIBC2010_00570
SJ	S16	S16.001	Lon-A peptidase	MER0233027		VIBC2010_18524
SJ	S16	S16.A10	ycbZ (Escherichia coli)	MER0472051
SJ	S16	unassigned	family S16 unassigned peptidases	MER0361724		VIBC2010_04629
SJ	S16	unassigned	family S16 unassigned peptidases	MER0361699		VIBC2010_17604
SK	S14	S14.001	peptidase Clp (type 1)	MER0299127
SK	S41	S41.001	C-terminal processing peptidase-1	MER0288460		VIBC2010_10122
SK	S49	unassigned	subfamily S49B unassigned peptidases	MER0229739		VIBC2010_18409
SS	S66	unassigned	family S66 unassigned peptidases	MER0399359
U-	U32	unassigned	family U32 unassigned peptidases	MER0404198

GENOME ANALYSIS: Comparison with 60 completely sequenced genomes from genus Vibrio
Family	Comment
C80	significant presence (1 homologues)
M20	significant decrease in homologues (3 homologues)
M72	significant presence (1 homologues)
M85	significant presence (1 homologues)
S49	significant decrease in homologues (1 homologues)