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MEROPS SUBMISSIONS

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information

Prevotella ruminicola

Taxonomy
Taxonomy database identifier: 839
Superkingdom Bacteria
Phylum Bacteroidetes
Order Bacteriodales
Family Prevotellaceae
Genus Prevotella
Species ruminicola
Peptidase View peptidase sequences from Prevotella ruminicola
Count of known and putative peptidases: 83, non-peptidase homologues 50
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
CA C1 unassigned subfamily C1A unassigned peptidases MER0203572 PRU_0556
CA C1 unassigned subfamily C1A unassigned peptidases MER0203652 PRU_2843
CA C1 unassigned subfamily C1B unassigned peptidases MER0203570 pepC PRU_0548
CA C1 unassigned subfamily C1B unassigned peptidases MER1166635
CA C1 unassigned subfamily C1B unassigned peptidases MER1166580
CA C10 C10.004 interpain A MER0203602 PRU_1227
CA C10 unassigned family C10 unassigned peptidases MER0203625 PRU_2065
CA C10 unassigned family C10 unassigned peptidases MER1168911
CA C10 unassigned family C10 unassigned peptidases MER1168850
CA C10 unassigned family C10 unassigned peptidases MER1168825
CA C10 unassigned family C10 unassigned peptidases MER1168965
CA C10 unassigned family C10 unassigned peptidases MER1169308
CA C10 unassigned family C10 unassigned peptidases MER1169319
CA C10 unassigned family C10 unassigned peptidases MER1168967
CA C39 C39.001 bacteriocin-processing peptidase MER0203600 PRU_1121
CA C39 C39.001 bacteriocin-processing peptidase MER0203578 PRU_0714
CD C11 unassigned family C11 unassigned peptidases MER0203651 PRU_2777
CD C11 unassigned family C11 unassigned peptidases MER0203591 PRU_1011
CD C11 unassigned family C11 unassigned peptidases MER0203586 PRU_0879
CD C13 unassigned family C13 unassigned peptidases MER0203568 PRU_0515
CD C13 unassigned family C13 unassigned peptidases MER0203607 PRU_1476
CD C13 unassigned family C13 unassigned peptidases MER1174503
CD C13 unassigned family C13 unassigned peptidases MER1174716
CD C13 unassigned family C13 unassigned peptidases MER1174522
CD C25 C25.004 PG0026 peptidase (Porphyromonas-type) MER0203648 PRU_2691
CO C40 C40.006 PgpA peptidase MER0203619 PRU_1945
G- G5 G05.007 MroQ peptidase (Staphylococcus aureus) MER0203642 PRU_2618
MA M1 unassigned family M1 unassigned peptidases MER0203645 PRU_2662
MA M3 unassigned subfamily M3A unassigned peptidases MER0203557 PRU_0196
MA M3 unassigned subfamily M3A unassigned peptidases MER0203577 dcp PRU_0685
MA M6 unassigned family M6 unassigned peptidases MER0203553 PRU_0120
MA M6 unassigned family M6 unassigned peptidases MER1198603
MA M6 unassigned family M6 unassigned peptidases MER1198304
MA M6 unassigned family M6 unassigned peptidases MER1198505
MA M13 M13.017 oligopeptidase O (Porphyromonas gingivalis) MER1227001
MA M13 unassigned family M13 unassigned peptidases MER0203574 pepO_1 PRU_0603
MA M13 unassigned family M13 unassigned peptidases MER0203639 pepO_2 PRU_2572
MA M41 M41.A17 DDB_G0284249 g.p. (Dictyostelium discoideum) MER0203548 ftsH PRU_0044
MA M48 unassigned subfamily M48C unassigned peptidases MER0203569 PRU_0547
MA M48 unassigned family M48 unassigned peptidases MER0203583 PRU_0775
MA M49 M49.003 dipeptidyl-peptidase IIIB (Bacteroides thetaiotaomicron-type) MER0203590 PRU_0989
MA M56 unassigned family M56 unassigned peptidases MER0934744 PRU_2128
MA M56 unassigned family M56 unassigned peptidases MER0899556 PRU_2456
MA M56 unassigned family M56 unassigned peptidases MER0933922 PRU_2724
MA M64 unassigned family M64 unassigned peptidases MER0203593 PRU_1040
MD M15 non-peptidase homologue subfamily M15A non-peptidase homologues MER0203657 PRU_2898
MD M15 non-peptidase homologue subfamily M15A non-peptidase homologues MER0203650 PRU_2772
MD M15 non-peptidase homologue subfamily M15A non-peptidase homologues MER0203559 PRU_0221
MD M15 non-peptidase homologue subfamily M15A non-peptidase homologues MER0203608 PRU_1484
MD M15 non-peptidase homologue subfamily M15A non-peptidase homologues MER0203624 PRU_2032
MD M15 non-peptidase homologue subfamily M15A non-peptidase homologues MER0203554 PRU_0152
MD M15 unassigned subfamily M15D unassigned peptidases MER0203616 PRU_1817
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0203552 PRU_0118
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0203566 PRU_0468
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0203567 PRU_0469
ME M16 unassigned subfamily M16B unassigned peptidases MER0203630 PRU_2293
ME M16 unassigned subfamily M16B unassigned peptidases MER0203640 PRU_2595
ME M16 unassigned family M16 unassigned peptidases MER0203551 PRU_0118
ME M16 unassigned family M16 unassigned peptidases MER0203635 PRU_2461
MG M24 unassigned subfamily M24A unassigned peptidases MER0203627 map_2 PRU_2094
MG M24 unassigned subfamily M24A unassigned peptidases MER0203580 map_1 PRU_0745
MG M24 unassigned subfamily M24B unassigned peptidases MER0203573 PRU_0557
MG M24 unassigned subfamily M24B unassigned peptidases MER0203628 PRU_2157
MH M18 unassigned family M18 unassigned peptidases MER0203562 PRU_0287
MH M20 M20.003 peptidase T MER0203561 pepT PRU_0258
MH M20 unassigned subfamily M20A unassigned peptidases MER0203659 PRU_2920
MH M20 unassigned subfamily M20C unassigned peptidases MER0203582 pepD_1 PRU_0766
MH M20 unassigned subfamily M20C unassigned peptidases MER0203609 pepD_2 PRU_1551
MH M28 non-peptidase homologue subfamily M28F non-peptidase homologues MER1254370
MH M28 non-peptidase homologue family M28 non-peptidase homologues MER0203656 PRU_2865
MH M28 non-peptidase homologue family M28 non-peptidase homologues MER1254163
MH M42 unassigned family M42 unassigned peptidases MER0203614 PRU_1737
MJ M19 unassigned family M19 unassigned peptidases MER0203654 PRU_2864
MJ M38 unassigned family M38 unassigned peptidases MER0203611 pyrC PRU_1614
MM M50 unassigned family M50 unassigned peptidases MER0203660 PRU_2924
MO M23 unassigned subfamily M23B unassigned peptidases MER0203620 PRU_1946
PA S1 unassigned subfamily S1C unassigned peptidases MER0203592 degP PRU_1020
PA S46 S46.001 dipeptidyl-peptidase 7 (Porphyromonas gingivalis-type) MER0203644 PRU_2649
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0458166 gltA_2 PRU_1960
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0203587 glmS PRU_0891
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0203571 PRU_0553
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0203622 asnB PRU_1978
PB C44 unassigned family C44 unassigned peptidases MER0203621 PRU_1973
PB C59 unassigned family C59 unassigned peptidases MER0203594 PRU_1044
PB C69 unassigned family C69 unassigned peptidases MER0203579 PRU_0741
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0203606 trpG PRU_1456
PC C26 C26.957 GMP synthase MER0203613 guaA PRU_1678
PC C26 C26.964 CTP synthetase MER0448392 pyrG PRU_1972
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0446225 hisH PRU_0485
PC C26 unassigned family C26 unassigned peptidases MER0203655 PRU_2864
PC C56 C56.972 phosphoribosylformylglycinamidine synthase MER0203646 purL PRU_2663
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0203618 PRU_1942
PE P1 P01.102 NylC g.p. (Flavobacterium sp. K172) MER0203641 PRU_2615
SB S8 unassigned subfamily S8A unassigned peptidases MER0203555 PRU_0169
SC S9 S09.013 dipeptidyl-peptidase 4 (bacteria-type 2) MER0203576 PRU_0634 PRU_0634
SC S9 S09.075 dipeptidyl-peptidase 5 (Porphyromonas sp.) MER0203605 PRU_1443
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0210909 xyn10D-fae1A PRU_2728
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0203556 PRU_0187
SC S9 unassigned subfamily S9A unassigned peptidases MER0203615 PRU_1806 PRU_1806
SC S9 unassigned subfamily S9B unassigned peptidases MER1298440
SC S9 unassigned subfamily S9B unassigned peptidases MER1299725
SC S9 unassigned subfamily S9C unassigned peptidases MER0203549 PRU_0076
SC S9 unassigned subfamily S9C unassigned peptidases MER1304997
SC S9 unassigned subfamily S9C unassigned peptidases MER1304749
SC S9 unassigned family S9 unassigned peptidases MER0203649 PRU_2748
SC S9 unassigned family S9 unassigned peptidases MER0203610 PRU_1600
SC S9 unassigned family S9 unassigned peptidases MER0203647 PRU_2679
SC S9 unassigned family S9 unassigned peptidases MER0203565 PRU_0408
SC S9 unassigned family S9 unassigned peptidases MER0203643 PRU_2630
SC S9 unassigned family S9 unassigned peptidases MER0203604 PRU_1396
SC S9 unassigned family S9 unassigned peptidases MER0203629 PRU_2212
SC S9 unassigned family S9 unassigned peptidases MER0203550 PRU_0080
SC S33 S33.021 iminopeptidase I (Lactobacillus delbrueckii) and similar MER0203603 pip PRU_1316
SE S11 S11.004 K15-type DD-transpeptidase MER0203584 PRU_0828
SE S13 unassigned family S13 unassigned peptidases MER0203623 dacB PRU_1998
SF S24 S24.003 UmuD protein MER0203588 umuD_1 PRU_0924
SF S24 S24.003 UmuD protein MER0203601 umuD_2 PRU_1185
SF S24 unassigned family S24 unassigned peptidases MER0203617 PRU_1881
SF S24 unassigned family S24 unassigned peptidases MER1332241
SF S26 unassigned subfamily S26A unassigned peptidases MER0203634 lepB PRU_2448
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0203612 radA PRU_1633
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0203633 PRU_2388
SJ S16 unassigned family S16 unassigned peptidases MER0203585 lon PRU_0842
SK S14 S14.001 peptidase Clp (type 1) MER0203547 clpP PRU_0029
SK S14 non-peptidase homologue family S14 non-peptidase homologues MER0203589 PRU_0953
SK S41 non-peptidase homologue subfamily S41A non-peptidase homologues MER0203542 PRU_0006
SK S41 non-peptidase homologue subfamily S41B non-peptidase homologues MER0203544
SK S41 unassigned subfamily S41A unassigned peptidases MER0203558 PRU_0198
SK S41 unassigned subfamily S41A unassigned peptidases MER0203632 PRU_2368
SK S41 unassigned subfamily S41A unassigned peptidases MER0203636 PRU_2476
SK S41 unassigned subfamily S41B unassigned peptidases MER0203597
SK S49 unassigned subfamily S49A unassigned peptidases MER0203563 sppA PRU_0308
SK S49 unassigned subfamily S49A unassigned peptidases MER1350846
SS S66 non-peptidase homologue family S66 non-peptidase homologues MER1084996 PRU_2079
SS S66 unassigned family S66 unassigned peptidases MER0203637 PRU_2505
ST S54 S54.025 At5g25752 rhomboid peptidase MER0203631 PRU_2303
U- U32 U32.001 collagenase (Porphyromonas-type) MER0203653 prtC PRU_2846
U- U32 U32.003 collagenase (Salmonella-type) MER0203575 PRU_0610

GENOME ANALYSIS: Comparison with 45 completely sequenced genomes from genus Prevotella
Family Comment
C1 lineage specific expansion (5 homologues)
C11 significant presence (3 homologues)
C13 lineage specific expansion (5 homologues)
C40 significant presence (1 homologues)
C59 significant presence (1 homologues)
M1 significant presence (1 homologues)
M15 lineage specific expansion (7 homologues)
M18 significant presence (1 homologues)
M42 significant presence (1 homologues)
P1 significant presence (1 homologues)
S9 lineage specific expansion (18 homologues)
S11 significant presence (1 homologues)
S24 lineage specific expansion (4 homologues)
S33 significant presence (1 homologues)
S66 significant presence (2 homologues)

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