Capnocytophaga ochracea

Taxonomy
Taxonomy database identifier: 1018
Superkingdom Bacteria
Phylum Bacteroidetes
Class Flavobacteria
Order Flavobacteriales
Family Flavobacteriaceae
Genus Capnocytophaga
Species ochracea
Peptidase View peptidase sequences from Capnocytophaga ochracea
Count of known and putative peptidases: 76, non-peptidase homologues 39
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0064473 lspA Coch_2030
CA C1 unassigned subfamily C1A unassigned peptidases MER0064697 Coch_1729
CD C11 unassigned family C11 unassigned peptidases MER0065132 Coch_0349
CO C40 C40.007 YddH peptidase MER0064687 HMPREF1977_0417
CO C40 unassigned family C40 unassigned peptidases MER0064280 HMPREF1319_2290
G- G5 G05.004 microcystinase MlrA MER0064449 Coch_1308
G- G5 unassigned family G5 unassigned peptidases MER0065438 Coch_2161
G- G5 unassigned family G5 unassigned peptidases MER0065090 Coch_0388
G- G5 unassigned family G5 unassigned peptidases MER0064551 Coch_1137
MA M1 unassigned family M1 unassigned peptidases MER0064267 Coch_1241
MA M1 unassigned family M1 unassigned peptidases MER0465120
MA M1 unassigned family M1 unassigned peptidases MER0064402 Coch_1365
MA M3 M03.005 peptidyl-dipeptidase Dcp MER0064543 Coch_1889
MA M3 unassigned subfamily M3A unassigned peptidases MER0064467 Coch_1271
MA M12 unassigned family M12 unassigned peptidases MER0194247
MA M12 unassigned family M12 unassigned peptidases MER0065094 Coch_0358
MA M13 unassigned family M13 unassigned peptidases MER0064478 Coch_1996
MA M13 unassigned family M13 unassigned peptidases MER0468259
MA M41 M41.A17 DDB_G0284249 g.p. (Dictyostelium discoideum) MER0064706 ftsH Coch_1654
MA M48 unassigned subfamily M48B unassigned peptidases MER0064311 htpX HMPREF1977_2087
MA M48 unassigned subfamily M48C unassigned peptidases MER0064281 Coch_2098
MA M48 unassigned family M48 unassigned peptidases MER0064498 Coch_1935
MA M48 unassigned family M48 unassigned peptidases MER0064388 Coch_1396
MA M64 unassigned family M64 unassigned peptidases MER0065305 HMPREF1319_1324
MC M14 non-peptidase homologue hypothetical protein YcjI (Escherichia coli) MER0064525 Coch_1906
MC M14 non-peptidase homologue family M14 non-peptidase homologues MER0064472 Coch_2049
MD M15 unassigned subfamily M15D unassigned peptidases MER0065464 ddpX HMPREF1977_0814
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0065285 Coch_0108
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0065279 Coch_0109
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0065280 Coch_0109
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0065265
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0470736 Coch_0109
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0470737 Coch_0109
ME M16 unassigned subfamily M16B unassigned peptidases MER0391185 HMPREF1977_0424
ME M16 unassigned family M16 unassigned peptidases MER0065266 Coch_0141
MG M24 unassigned subfamily M24A unassigned peptidases MER0064350 map Coch_0818
MG M24 unassigned subfamily M24B unassigned peptidases MER0064303 Coch_1218
MH M20 M20.003 peptidase T MER0064708 pepT Coch_1622
MH M20 unassigned subfamily M20C unassigned peptidases MER0064471 Coch_2053
MH M20 unassigned subfamily M20F unassigned peptidases MER0064312 Coch_1195
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0065286 Coch_0093
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0064328 Coch_0610
MM M50 unassigned family M50 unassigned peptidases MER0064786 Coch_0482
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0064343 HMPREF1319_0553
MO M23 non-peptidase homologue family M23 non-peptidase homologues MER0064385 Coch_0749
MO M23 unassigned subfamily M23B unassigned peptidases MER0064702 Coch_1724
MO M23 unassigned subfamily M23B unassigned peptidases MER0064679 HMPREF1977_1874
PA S1 S01.453 MucD peptidase MER0064283 Coch_2092
PA S46 S46.002 dipeptidyl-peptidase 11 (Porphyromonas gingivalis-type) MER0065040 HMPREF1977_1325
PA S46 S46.002 dipeptidyl-peptidase 11 (Porphyromonas gingivalis-type) MER0064694 Coch_1768
PA S46 S46.002 dipeptidyl-peptidase 11 (Porphyromonas gingivalis-type) MER0312690 HMPREF1977_0369
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0064401 Coch_1372
PB C44 unassigned family C44 unassigned peptidases MER0064327 Coch_0623
PB C45 unassigned family C45 unassigned peptidases MER0064271 Coch_1418
PC C26 C26.957 GMP synthase MER0064684 guaA Coch_1861
PC C26 C26.964 CTP synthetase MER0065261 pyrG Coch_0157
PC C26 unassigned family C26 unassigned peptidases MER0065225 Coch_0275
PC C56 C56.972 phosphoribosylformylglycinamidine synthase MER0064466 Coch_1280
PC S51 S51.002 alpha-aspartyl dipeptidase (eukaryote) MER0065293 Coch_0081
SB S8 unassigned subfamily S8A unassigned peptidases MER0064965 Coch_0437
SC S9 S09.010 oligopeptidase B MER0064393 Coch_1392
SC S9 S09.013 dipeptidyl-peptidase 4 (bacteria-type 2) MER0064665 Coch_1057/dpp4 Coch_1057
SC S9 S09.017 prolyl tripeptidyl peptidase MER0064360 Coch_0754
SC S9 S09.075 dipeptidyl-peptidase 5 (Porphyromonas sp.) MER0064686 Coch_1823
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0194252 Coch_0619
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0065048 Coch_0389
SC S9 unassigned subfamily S9A unassigned peptidases MER0064352 pep HMPREF1977_1740
SC S9 unassigned subfamily S9B unassigned peptidases MER1293891
SC S9 unassigned subfamily S9B unassigned peptidases MER0478106
SC S9 unassigned subfamily S9C unassigned peptidases MER0064479 Coch_1940
SC S9 unassigned family S9 unassigned peptidases MER0064931 Coch_0457 Coch_0457
SC S9 unassigned family S9 unassigned peptidases MER0065287 Coch_0092
SC S9 unassigned family S9 unassigned peptidases MER0064626 Coch_1124
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1024998 HMPREF1977_1382
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0064335 Coch_1517
SC S33 unassigned family S33 unassigned peptidases MER0065257 Coch_0185
SC S33 unassigned family S33 unassigned peptidases MER0194269 Coch_1959
SC S33 unassigned family S33 unassigned peptidases MER0065400 Coch_2165
SC S33 unassigned family S33 unassigned peptidases MER0065004 Coch_0409
SC S33 unassigned family S33 unassigned peptidases MER0064970 Coch_0415
SC S33 unassigned family S33 unassigned peptidases MER0064729 Coch_0519
SC S33 unassigned family S33 unassigned peptidases MER0064268 Coch_1232
SE S11 unassigned family S11 unassigned peptidases MER0950882 bla TEM-17
SE S12 S12.A23 GYO_0385 g.p. (Bacillus subtilis) MER0064664 Coch_1082
SE S12 unassigned family S12 unassigned peptidases MER0065316 Coch_0059
SE S12 unassigned family S12 unassigned peptidases MER0064338 Coch_1483
SF S24 non-peptidase homologue family S24 non-peptidase homologues MER0194253 Coch_0655
SF S26 unassigned subfamily S26A unassigned peptidases MER0064688 lepB Coch_1810
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0065465 Coch_2129
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0064530 Coch_1890
SJ S16 unassigned family S16 unassigned peptidases MER0065354 lon HMPREF1319_1338
SK S14 S14.001 peptidase Clp (type 1) MER0064474 clpP Coch_2009
SK S41 S41.001 C-terminal processing peptidase-1 MER0065355 Coch_0003
SK S41 S41.012 Pep putative peptidase (Vibrio-type) MER0065454 Coch_2144
SK S41 unassigned subfamily S41A unassigned peptidases MER1346129
SK S41 unassigned subfamily S41A unassigned peptidases MER0064712 Coch_1545
SK S49 unassigned subfamily S49B unassigned peptidases MER0064293 sppA Coch_1223
ST S54 S54.025 At5g25752 rhomboid peptidase MER0065440 Coch_2146
ST S54 S54.025 At5g25752 rhomboid peptidase MER0064685 Coch_1836
ST S54 unassigned family S54 unassigned peptidases MER0065378 Coch_2191
U- U32 U32.001 collagenase (Porphyromonas-type) MER0064277 Coch_2116

GENOME ANALYSIS: Comparison with 16 completely sequenced genomes from genus Capnocytophaga
Family Comment
G5 significant presence (4 homologues)
M12 significant presence (2 homologues)
M16 lineage specific expansion (8 homologues)
S11 significant presence (1 homologues)
S33 lineage specific expansion (8 homologues)
S51 significant decrease in homologues (1 homologues)