Robiginitalea biformata

Taxonomy
Taxonomy database identifier: 252307
Superkingdom Bacteria
Phylum Bacteroidetes
Class Flavobacteria
Order Flavobacteriales
Family Flavobacteriaceae
Genus Robiginitalea
Species biformata
Peptidase View peptidase sequences from Robiginitalea biformata
Count of known and putative peptidases: 96, non-peptidase homologues 33
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0064017 lspA RB2501_07815
AE A31 unassigned family A31 unassigned peptidases MER0063135 RB2501_04345
CD C14 unassigned subfamily C14B unassigned peptidases MER0083790 RB2501_04495
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0126059 RB2501_12984
CO C40 unassigned family C40 unassigned peptidases MER0170912 RB2501_08880
G- G5 unassigned family G5 unassigned peptidases MER0938844 RB2501_04605
G- G5 unassigned family G5 unassigned peptidases MER0062177 RB2501_12077
MA M1 unassigned family M1 unassigned peptidases MER0813920 RB2501_09220
MA M1 unassigned family M1 unassigned peptidases MER0083762 RB2501_02515
MA M1 unassigned family M1 unassigned peptidases MER0083767 RB2501_00466
MA M1 unassigned family M1 unassigned peptidases MER0464505 RB2501_10902
MA M1 unassigned family M1 unassigned peptidases MER0079042 RB2501_14469
MA M1 unassigned family M1 unassigned peptidases MER0083798 RB2501_06970
MA M3 unassigned subfamily M3A unassigned peptidases MER0108151 RB2501_09730
MA M12 unassigned subfamily M12B unassigned peptidases MER0242575 RB2501_04980
MA M41 M41.A17 DDB_G0284249 g.p. (Dictyostelium discoideum) MER0105671 ftsH RB2501_02320
MA M48 unassigned subfamily M48A unassigned peptidases MER0062174 RB2501_01750
MA M48 unassigned subfamily M48C unassigned peptidases MER0886873 RB2501_02560
MA M56 unassigned family M56 unassigned peptidases MER0935151 RB2501_04035
MA M56 unassigned family M56 unassigned peptidases MER0934181 RB2501_11012
MA M61 unassigned family M61 unassigned peptidases MER0118580 RB2501_03825
MC M14 non-peptidase homologue subfamily M14B non-peptidase homologues MER0836674 RB2501_14964
MC M14 non-peptidase homologue subfamily M14B non-peptidase homologues MER0083772 RB2501_11657
MC M14 non-peptidase homologue hypothetical protein YcjI (Escherichia coli) MER0144851 RB2501_15284
MC M14 non-peptidase homologue family M14 non-peptidase homologues MER0083770 RB2501_11282
MC M14 non-peptidase homologue family M14 non-peptidase homologues MER0083774 RB2501_12467
MC M14 unassigned subfamily M14D unassigned peptidases MER0309147 RB2501_13074
MD M15 unassigned subfamily M15B unassigned peptidases MER0083763 RB2501_02555
MD M15 unassigned subfamily M15D unassigned peptidases MER0123123 RB2501_13189
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0083783 RB2501_15644
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0083802 RB2501_08110
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0060851 RB2501_15649
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0063137 RB2501_08105
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0083780 RB2501_14539
ME M16 unassigned subfamily M16B unassigned peptidases MER0083779 RB2501_14539
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0083784 RB2501_15679
MG M24 unassigned subfamily M24A unassigned peptidases MER0083764 RB2501_02585
MG M24 unassigned subfamily M24B unassigned peptidases MER0083795 RB2501_06345
MG M24 unassigned subfamily M24B unassigned peptidases MER1245231
MH M20 M20.003 peptidase T MER0083771 pepT RB2501_11322
MH M20 non-peptidase homologue subfamily M20A non-peptidase homologues MER0854607 RB2501_08675
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0374846 RB2501_12622
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0841136 RB2501_12582
MH M20 unassigned subfamily M20A unassigned peptidases MER0855221 RB2501_10682
MH M20 unassigned subfamily M20C unassigned peptidases MER0100514 RB2501_01725
MH M20 unassigned family M20D unassigned peptidases MER0474527 RB2501_13699
MH M20 unassigned family M20D unassigned peptidases MER0083778 RB2501_14489
MH M20 unassigned subfamily M20F unassigned peptidases MER0083788 RB2501_04025
MH M20 unassigned family M20 unassigned peptidases MER0083760 RB2501_02230
MH M28 non-peptidase homologue subfamily M28E non-peptidase homologues MER0083766 RB2501_00456
MH M28 unassigned subfamily M28B unassigned peptidases MER0100893 RB2501_12577
MH M28 unassigned subfamily M28B unassigned peptidases MER0105953 RB2501_14204
MH M28 unassigned subfamily M28D unassigned peptidases MER0083769 RB2501_11227
MH M28 unassigned subfamily M28D unassigned peptidases MER0083791 RB2501_05185
MH M28 unassigned subfamily M28E unassigned peptidases MER0083806 RB2501_09650
MH M28 unassigned family M28 unassigned peptidases MER0079041 RB2501_11962
MH M28 unassigned family M28 unassigned peptidases MER0083777 RB2501_14084
MH M28 unassigned family M28 unassigned peptidases MER0083792 RB2501_05210
MH M28 unassigned family M28 unassigned peptidases MER0079043 RB2501_07010
MH M42 unassigned family M42 unassigned peptidases MER0137509 RB2501_00030
MJ M19 unassigned family M19 unassigned peptidases MER0083803 RB2501_08460
MJ M19 unassigned family M19 unassigned peptidases MER0140131 RB2501_15049
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0861410 RB2501_04110
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0860953 RB2501_16209
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0859845 RB2501_10857
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0872606 RB2501_01735
MM M50 unassigned family M50 unassigned peptidases MER0063136 RB2501_05505
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0480008 RB2501_06120
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0479899 RB2501_06135
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0083801 RB2501_07860
MO M23 unassigned subfamily M23B unassigned peptidases MER0479717 RB2501_11602
MO M23 unassigned subfamily M23B unassigned peptidases MER0083797 RB2501_06755
MO M23 unassigned subfamily M23B unassigned peptidases MER0083805 RB2501_09205
MO M23 unassigned subfamily M23B unassigned peptidases MER0389789 RB2501_11777
MT M81 unassigned family M81 unassigned peptidases MER0223209 RB2501_00721
MU M103 M103.UNW family M103 non-peptidase homologues MER0138803 RB2501_09465
PA S1 S01.453 MucD peptidase MER0062439 RB2501_06610
PA S1 unassigned subfamily S1B unassigned peptidases MER0963878 RB2501_16134
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0457337 RB2501_09360
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0457336 RB2501_10447
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0170749 glmS RB2501_07985
PB S45 S45.002 cephalosporin acylase precursor MER0108990 RB2501_05425
PB S45 S45.002 cephalosporin acylase precursor MER0109444 RB2501_08450
PB S45 S45.003 cephalosporin C acylase precursor MER0109810 RB2501_14349
PB S45 S45.003 cephalosporin C acylase precursor MER0108854 RB2501_05420
PB T2 unassigned family T2 unassigned peptidases MER0126406 RB2501_03780
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0107377 RB2501_14579
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0107476 RB2501_03385
PC C26 C26.957 GMP synthase MER0438014 guaA RB2501_12502
PC C26 C26.959 TRP3 protein MER0438013 RB2501_02200
PC C26 C26.964 CTP synthetase MER0438015 pyrG RB2501_12532
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0438016 hisH RB2501_15139
PC C26 unassigned family C26 unassigned peptidases MER0438017 carA RB2501_09995
PC C56 C56.001 PfpI peptidase MER0062181 RB2501_06385
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0906394 RB2501_10917
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0164660
PE P1 P01.003 BapF peptidase (Pseudomonas sp.) MER0141680 RB2501_11992
PE P1 unassigned family P01 unassigned peptidases MER0083794 RB2501_06295
SB S8 unassigned subfamily S8A unassigned peptidases MER0083793 RB2501_06290
SB S8 unassigned subfamily S8A unassigned peptidases MER0083799 RB2501_06975
SC S9 S09.010 oligopeptidase B MER0062183 RB2501_07190
SC S9 S09.010 oligopeptidase B MER0083782 RB2501_15554
SC S9 S09.013 dipeptidyl-peptidase 4 (bacteria-type 2) MER0083804 RB2501_08865 RB2501_08865
SC S9 S09.021 glutamyl endopeptidase C MER0105850 RB2501_01905
SC S9 non-peptidase homologue subfamily S9B non-peptidase homologues MER1001371 RB2501_05125
SC S9 unassigned subfamily S9A unassigned peptidases MER0083800 RB2501_07385
SC S9 unassigned subfamily S9B unassigned peptidases MER0083789 RB2501_04435 RB2501_04435
SC S9 unassigned subfamily S9B unassigned peptidases MER1297201
SC S10 unassigned family S10 unassigned peptidases MER0083781 RB2501_15419
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1025176 RB2501_05125
SC S15 unassigned family S15 unassigned peptidases MER0083768 RB2501_10692
SC S33 unassigned family S33 unassigned peptidases MER0122695 RB2501_04430
SC S33 unassigned family S33 unassigned peptidases MER0213056 RB2501_10647
SC S33 unassigned family S33 unassigned peptidases MER0213161 RB2501_03150
SE S12 S12.950 esterase EstB MER0420339 RB2501_05190
SE S12 S12.950 esterase EstB MER0420679 RB2501_00471
SE S12 S12.950 esterase EstB MER0176903 RB2501_00846
SE S12 S12.A03 EcHS_A2566 protein (Escherichia coli) MER0420155 RB2501_05985
SE S12 unassigned family S12 unassigned peptidases MER0420867 RB2501_01830
SE S12 unassigned family S12 unassigned peptidases MER0083765 RB2501_03090
SE S12 unassigned family S12 unassigned peptidases MER0124703 RB2501_00546
SE S12 unassigned family S12 unassigned peptidases MER0119121 RB2501_10982
SE S12 unassigned family S12 unassigned peptidases MER0124485 RB2501_11022
SE S12 unassigned family S12 unassigned peptidases MER0083773 RB2501_12082
SE S12 unassigned family S12 unassigned peptidases MER0118720 RB2501_06080
SE S12 unassigned family S12 unassigned peptidases MER0141485 RB2501_06320
SE S12 unassigned family S12 unassigned peptidases MER0420868 RB2501_06395
SE S12 unassigned family S12 unassigned peptidases MER0356076 RB2501_05320
SE S12 unassigned family S12 unassigned peptidases MER0136462 RB2501_10852
SE S12 unassigned family S12 unassigned peptidases MER0139736 RB2501_10862
SE S12 unassigned family S12 unassigned peptidases MER0420185 RB2501_13284
SE S12 unassigned family S12 unassigned peptidases MER0176598 RB2501_14374
SE S12 unassigned family S12 unassigned peptidases MER0164584 RB2501_10657
SE S13 unassigned family S13 unassigned peptidases MER0119466 RB2501_00711
SF S26 unassigned subfamily S26A unassigned peptidases MER0064016 RB2501_01630
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0475456 RB2501_07950
SJ S16 unassigned family S16 unassigned peptidases MER0062178 RB2501_12744
SK S14 S14.001 peptidase Clp (type 1) MER0062179 clpP2 RB2501_03315
SK S14 S14.005 peptidase Clp (type 5) MER0062175 clpP1 RB2501_02475
SK S41 S41.001 C-terminal processing peptidase-1 MER0063597 RB2501_08900
SK S41 S41.004 C-terminal processing peptidase-3 MER0062180 RB2501_05820
SK S41 unassigned subfamily S41A unassigned peptidases MER1057554 RB2501_00201
SK S41 unassigned subfamily S41A unassigned peptidases MER0062182 RB2501_06950
SK S49 unassigned subfamily S49A unassigned peptidases MER1351070
SK S49 unassigned subfamily S49B unassigned peptidases MER0083786 RB2501_03365
ST S54 S54.025 At5g25752 rhomboid peptidase MER0113569 RB2501_01655
ST S54 unassigned family S54 unassigned peptidases MER1074817 RB2501_09805
ST S54 unassigned family S54 unassigned peptidases MER1079304 RB2501_14599
ST S54 unassigned family S54 unassigned peptidases MER1083655 RB2501_01650

GENOME ANALYSIS: Comparison with 115 completely sequenced genomes from family Flavobacteriaceae
Family Comment
A31 significant presence (1 homologues)
C14 significant presence (1 homologues)
M103 significant presence (1 homologues)
M19 significant presence (2 homologues)
M81 significant presence (1 homologues)
P1 significant presence (2 homologues)
S10 significant presence (1 homologues)
S13 significant presence (1 homologues)
S45 significant presence (4 homologues)