Roseobacter sp. MED193

Taxonomy
Taxonomy database identifier: 314262
Superkingdom Bacteria
Phylum Proteobacteria
Class Alphaproteobacteria
Order Rhodobacterales
Family Rhodobacteraceae
Genus Roseobacter
Species sp. MED193
Peptidase View peptidase sequences from Roseobacter sp. MED193
Count of known and putative peptidases: 70, non-peptidase homologues 23
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AA A32 A32.002 RC1339 g.p. (Rickettsia conorii) MER0241785 MED193_22651
AC A8 unassigned family A8 unassigned peptidases MER1155439
AC A8 unassigned family A8 unassigned peptidases MER0063242 lspA1 MED193_12998
AC A8 unassigned family A8 unassigned peptidases MER0063243 lspA2 MED193_02195
CA C1 unassigned subfamily C1B unassigned peptidases MER0428485 MED193_19954
CD C14 unassigned subfamily C14B unassigned peptidases MER0429417 MED193_01580
CL C82 C82.003 ykuD transpeptidase MER0463483
CL C82 C82.003 ykuD transpeptidase MER0463484 MED193_02170
CL C82 C82.003 ykuD transpeptidase MER0461948
CL C82 C82.A01 LdtF protein (Escherichia coli) MER0244042
CL C82 C82.A01 LdtF protein (Escherichia coli) MER0461947 MED193_02185
CL C82 unassigned subfamily C82A unassigned peptidases MER0740592 MED193_16297
CL C82 unassigned subfamily C82A unassigned peptidases MER0463481
CL C82 unassigned subfamily C82A unassigned peptidases MER0463482
CL C82 unassigned subfamily C82A unassigned peptidases MER0463485
CO C40 C40.001 dipeptidyl-peptidase VI (bacteria) MER0123600 MED193_11539
G- G5 unassigned family G5 unassigned peptidases MER0062391 MED193_11639
GC G4 non-peptidase homologue family G4 non-peptidase homologues MER0352091
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0083401 MED193_07304
MA M3 unassigned subfamily M3A unassigned peptidases MER0103276 MED193_09890
MA M3 unassigned subfamily M3B unassigned peptidases MER0140044 MED193_08378
MA M32 unassigned family M32 unassigned peptidases MER0083399 MED193_04446
MA M41 unassigned family M41 unassigned peptidases MER0105571 ftsH MED193_09135
MA M41 unassigned family M41 unassigned peptidases MER0083400 MED193_00805
MA M48 unassigned subfamily M48C unassigned peptidases MER0063069 MED193_22341
MA M48 unassigned subfamily M48C unassigned peptidases MER0063071 MED193_21094
MA M56 unassigned family M56 unassigned peptidases MER0934659 MED193_09605
MD M15 non-peptidase homologue subfamily M15A non-peptidase homologues MER0179331
MD M74 unassigned family M74 unassigned peptidases MER0083403 mepA MED193_15152
MD M74 unassigned family M74 unassigned peptidases MER1263461
ME M16 M16.019 YMXG peptidase MER0063068 MED193_12988
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0063067 MED193_12983
ME M16 unassigned subfamily M16B unassigned peptidases MER0063070 MED193_08928
MF M17 unassigned family M17 unassigned peptidases MER0083395 MED193_11534
MF M17 unassigned family M17 unassigned peptidases MER0083398 pepA MED193_22641
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0083405 MED193_15902
MG M24 non-peptidase homologue subfamily M24B non-peptidase homologues MER0179245 MED193_01705
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0083406 MED193_17174
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0483531
MG M24 unassigned subfamily M24B unassigned peptidases MER0164833 MED193_07379
MH M20 unassigned subfamily M20A unassigned peptidases MER0472697
MH M20 unassigned subfamily M20A unassigned peptidases MER0474930
MH M20 unassigned subfamily M20B unassigned peptidases MER0063553 MED193_07334
MH M20 unassigned family M20D unassigned peptidases MER0125849 MED193_07164
MH M20 unassigned family M20D unassigned peptidases MER0171145 MED193_07169
MH M20 unassigned family M20D unassigned peptidases MER0118055 MED193_07174
MH M20 unassigned family M20D unassigned peptidases MER0142850 MED193_01715
MH M20 unassigned family M20D unassigned peptidases MER0179401 MED193_04771
MH M20 unassigned family M20D unassigned peptidases MER0117255 MED193_22576
MH M20 unassigned family M20D unassigned peptidases MER0373679 MED193_00185
MH M20 unassigned family M20 unassigned peptidases MER0063555 MED193_21059
MJ M19 non-peptidase homologue family M19 non-peptidase homologues MER0138189 MED193_19304
MJ M38 M38.982 urease MER0872213 ureC
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0859427 hutI
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0870507 MED193_21951
MM M50 unassigned family M50 unassigned peptidases MER0896353 MED193_04926
MO M23 M23.009 Mername-AA292 peptidase MER0063814 MED193_03377
MO M23 M23.009 Mername-AA292 peptidase MER0165140 MED193_02210
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0063663 MED193_20074
MO M23 non-peptidase homologue family M23 non-peptidase homologues MER0063552 MED193_06854
MS M75 M75.001 imelysin MER0109387 MED193_19664
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0172540
MU M103 M103.UNW family M103 non-peptidase homologues MER0105766 MED193_14582
PA S1 S01.260 B1598 peptidase MER0083404 MED193_15717
PA S1 S01.260 B1598 peptidase MER0083407 MED193_18099
PA S1 S01.442 HtrA stress response protease (Brucella-type) MER0060818 MED193_16779
PA S1 non-peptidase homologue subfamily S1B non-peptidase homologues MER0965565 MED193_08858
PA S1 unassigned subfamily S1A unassigned peptidases MER0217216 MED193_16969
PA S1 unassigned subfamily S1C unassigned peptidases MER0060814 MED193_12318
PA S1 unassigned subfamily S1C unassigned peptidases MER0060819 MED193_20854
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0117256 MED193_06824
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0458741
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0171024
PB S45 S45.003 cephalosporin C acylase precursor MER0109848 MED193_04566
PB T1 T01.006 HslV component of HslUV peptidase MER0060817 MED193_13742
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0107464 MED193_19129
PB T3 T03.014 gamma-glutamyltransferase 2 (bacterial) MER0172379 MED193_17429
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0107463 MED193_14727
PB T3 unassigned family T3 unassigned peptidases MER0107465 MED193_19369
PC C26 C26.957 GMP synthase MER0443807
PC C26 C26.959 TRP3 protein MER0435972
PC C26 C26.964 CTP synthetase MER0450062
PC C26 unassigned family C26 unassigned peptidases MER0451023 MED193_07289
PC C26 unassigned family C26 unassigned peptidases MER0444243
PC C26 unassigned family C26 unassigned peptidases MER0441800
PC C26 unassigned family C26 unassigned peptidases MER0449330
PC C26 unassigned family C26 unassigned peptidases MER0446844
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0170688
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0170748
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0172579 MED193_01130
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0172758
PE P1 P01.101 pantetheinyl hydrolase ThnT precursor MER0063554 MED193_15117
PE T5 T05.001 ornithine acetyltransferase precursor MER0142851 argJ MED193_14092
SC S9 unassigned subfamily S9B unassigned peptidases MER0996527 MED193_11574
SC S9 unassigned family S9 unassigned peptidases MER0477585 MED193_04326 MED193_04326
SC S9 unassigned family S9 unassigned peptidases MER0490544
SC S9 unassigned family S9 unassigned peptidases MER0213321 MED193_11033
SC S15 unassigned family S15 unassigned peptidases MER1024636 MED193_17544
SC S33 S33.001 prolyl aminopeptidase MER0100506 MED193_14057
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0213805
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0211051
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0215581
SC S33 unassigned family S33 unassigned peptidases MER0215564
SC S33 unassigned family S33 unassigned peptidases MER0211108
SC S33 unassigned family S33 unassigned peptidases MER0213257
SC S33 unassigned family S33 unassigned peptidases MER0209719
SE S11 unassigned family S11 unassigned peptidases MER0083397 MED193_11168
SE S11 unassigned family S11 unassigned peptidases MER0083408 MED193_18604
SE S12 S12.950 esterase EstB MER0420684
SE S12 unassigned family S12 unassigned peptidases MER1008427 MED193_17994
SE S12 unassigned family S12 unassigned peptidases MER1008142 MED193_06404
SE S12 unassigned family S12 unassigned peptidases MER0355174 MED193_00745
SE S13 unassigned family S13 unassigned peptidases MER0100505 MED193_09730
SF S24 S24.001 repressor LexA MER0137317 lexA MED193_03687
SF S24 S24.003 UmuD protein MER0137217 MED193_12443
SF S24 S24.003 UmuD protein MER0165190 MED193_12418
SF S26 S26.001 signal peptidase I MER0063241 MED193_16424
SH S78 S78.001 prohead peptidase (bacteriophage HK97) MER0061990 MED193_03247
SJ S16 S16.001 Lon-A peptidase MER0060816 MED193_06539
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0475283
SK S14 S14.001 peptidase Clp (type 1) MER0060815 clpP1 MED193_05699
SK S14 unassigned family S14 unassigned peptidases MER0061989 clpP2 MED193_13313
SK S14 unassigned family S14 unassigned peptidases MER1321342
SK S14 unassigned family S14 unassigned peptidases MER0170569 MED193_18794
SK S41 S41.004 C-terminal processing peptidase-3 MER0060813 MED193_11679
SK S49 S49.003 protein C (bacteriophage lambda) MER0063816 MED193_12498
SK S49 non-peptidase homologue subfamily S49A unassigned non-peptidase homologues MER1070938 MED193_18794
SK S49 unassigned subfamily S49B unassigned peptidases MER0063550 MED193_11013
SK S49 unassigned subfamily S49B unassigned peptidases MER1349601
ST S54 non-peptidase homologue family S54 non-peptidase homologues MER1080768 MED193_09985
ST S54 unassigned family S54 unassigned peptidases MER1082251 MED193_22256
ST S54 unassigned family S54 unassigned peptidases MER1077305 MED193_09650
U- U32 unassigned family U32 unassigned peptidases MER0062392 MED193_12928

GENOME ANALYSIS: Comparison with 100 completely sequenced genomes from family Rhodobacteraceae
Family Comment
C1 significant presence (1 homologues)
G4 significant presence (1 homologues)
U32 significant presence (1 homologues)