Thiomicrospira crunogena

Taxonomy
Taxonomy database identifier: 39765
Superkingdom		Bacteria
Phylum		Proteobacteria
Class		Gammaproteobacteria
Order		Thiotrichales
Family		Piscirickettsiaceae
Genus		Thiomicrospira
Species		crunogena
Peptidase			View peptidase sequences from Thiomicrospira crunogena
Count of known and putative peptidases: 58, non-peptidase homologues 13
Completely sequences genomes from subspecies and strains				Protein coding genes
	To show all strains with completely sequenced genomes, click here.

Clan	Family	MEROPS ID	Peptidase or homologue (subtype)	MERNUM	Gene	Locus
AC	A8	unassigned	family A8 unassigned peptidases	MER0057215	lspA	Tcr_0496
AD	A24	unassigned	subfamily A24A unassigned peptidases	MER0057234		Tcr_1391
AE	A31	unassigned	family A31 unassigned peptidases	MER0057245		Tcr_2036
CA	C93	unassigned	family C93 unassigned peptidases	MER0393084		Tcr_0209
CL	C82	unassigned	subfamily C82A unassigned peptidases	MER0461858		Tcr_1300
CL	C82	unassigned	subfamily C82A unassigned peptidases	MER0463384		Tcr_1752
G-	G5	G05.004	microcystinase MlrA	MER0057479		Tcr_1073
MA	M1	M01.005	alanyl aminopeptidase (bacterial-type)	MER0057235		Tcr_1485
MA	M3	M03.004	oligopeptidase A	MER0057210		Tcr_0067
MA	M41	M41.001	FtsH peptidase	MER0057223	ftsH	Tcr_0812
MA	M48	M48.002	HtpX peptidase	MER0057238	htpX	Tcr_1626
MA	M48	unassigned	subfamily M48A unassigned peptidases	MER0057217		Tcr_0632
MA	M48	unassigned	subfamily M48C unassigned peptidases	MER0057209		Tcr_0018
MA	M48	unassigned	subfamily M48C unassigned peptidases	MER0057216		Tcr_0605
MA	M61	unassigned	family M61 unassigned peptidases	MER0057226		Tcr_1217
MA	M90	unassigned	family M90 unassigned peptidases	MER0227889		Tcr_2033
MC	M14	unassigned	subfamily M14B unassigned peptidases	MER0057241		Tcr_1751
ME	M16	M16.019	YMXG peptidase	MER0057244		Tcr_1941
ME	M16	unassigned	subfamily M16B unassigned peptidases	MER0057243		Tcr_1940
ME	M16	unassigned	subfamily M16C unassigned peptidases	MER0057420		Tcr_1130
MF	M17	M17.003	PepA aminopeptidase	MER0057240	pepA	Tcr_1748
MG	M24	M24.001	methionyl aminopeptidase 1 (Escherichia-type)	MER0057482		Tcr_1286
MG	M24	M24.004	aminopeptidase P (bacteria)	MER0057236		Tcr_1559
MG	M24	non-peptidase homologue	subfamily M24B non-peptidase homologues	MER0057212		Tcr_0221
MH	M20	unassigned	subfamily M20A unassigned peptidases	MER0057232	dapE	Tcr_1291
MH	M20	unassigned	family M20D unassigned peptidases	MER0057211		Tcr_0219
MJ	M38	non-peptidase homologue	family M38 non-peptidase homologues	MER0864431	Tcr_1889
MM	M50	unassigned	subfamily M50B unassigned peptidases	MER0057227		Tcr_1229
MM	M50	unassigned	subfamily M50B unassigned peptidases	MER0057231		Tcr_1279
MO	M23	non-peptidase homologue	subfamily M23B non-peptidase homologues	MER0057229		Tcr_1254
MO	M23	unassigned	subfamily M23B unassigned peptidases	MER0057213		Tcr_0352
MO	M23	unassigned	subfamily M23B unassigned peptidases	MER0057222		Tcr_0798
NB	N6	N06.A01	FlhB protein (Escherichia coli)	MER0326908
PA	S1	unassigned	subfamily S1C unassigned peptidases	MER0057219		Tcr_0731
PB	C44	C44.001	amidophosphoribosyltransferase precursor	MER0057473		Tcr_0808
PB	C44	C44.003	glutamate synthase (NADPH) large chain	MER0057493		Tcr_1957
PB	C44	non-peptidase homologue	family C44 non-peptidase homologues	MER0057488		Tcr_1692
PB	C44	unassigned	family C44 unassigned peptidases	MER0057472		Tcr_0595
PB	C44	unassigned	family C44 unassigned peptidases	MER0057484		Tcr_1346
PB	T1	T01.006	HslV component of HslUV peptidase	MER0057470	hslV	Tcr_0410
PB	T3	T03.001	gamma-glutamyltransferase 1 (bacterial-type)	MER0057489		Tcr_1715
PB	T3	T03.025	oxamate amidohydrolase proenzyme (Klebsiella pneumonia)	MER0057485		Tcr_1413
PC	C26	C26.954	carA protein	MER0057474	carA	Tcr_0878
PC	C26	C26.955	aminodeoxychorismate synthase, subunit II	MER0057467		Tcr_0267
PC	C26	C26.957	GMP synthase	MER0057487	guaA	Tcr_1615
PC	C26	C26.964	CTP synthetase	MER0446361	pyrG	Tcr_1262
PC	C26	unassigned	family C26 unassigned peptidases	MER0057483		Tcr_1342
PC	C56	non-peptidase homologue	family C56 non-peptidase homologues	MER0057490		Tcr_1780
PE	T5	T05.001	ornithine acetyltransferase precursor	MER0057471	argJ	Tcr_0590
SB	S8	unassigned	subfamily S8A unassigned peptidases	MER0057237		Tcr_1608
SC	S9	S09.A40	YqiA protein (Escherichi coli)	MER0213185		Tcr_1247
SC	S9	unassigned	subfamily S9C unassigned peptidases	MER0057214		Tcr_0452
SC	S33	S33.001	prolyl aminopeptidase	MER0057465		Tcr_0168
SC	S33	unassigned	family S33 unassigned peptidases	MER0057492	metX	Tcr_1839
SC	S33	unassigned	family S33 unassigned peptidases	MER0057494		Tcr_1980
SE	S11	unassigned	family S11 unassigned peptidases	MER0057239		Tcr_1635
SE	S12	unassigned	family S12 unassigned peptidases	MER0057468		Tcr_0338
SE	S12	unassigned	family S12 unassigned peptidases	MER0057478		Tcr_1072
SE	S13	unassigned	family S13 unassigned peptidases	MER0057221		Tcr_0793
SF	S24	S24.001	repressor LexA	MER0057228		Tcr_1234
SF	S24	S24.003	UmuD protein	MER0057224		Tcr_0858
SF	S26	S26.001	signal peptidase I	MER0057220		Tcr_0733
SJ	S16	S16.001	Lon-A peptidase	MER0057481	lon1	Tcr_1179
SJ	S16	S16.A04	DNA repair protein RadA (Escherichia coli)	MER0057477		Tcr_0994
SJ	S16	unassigned	family S16 unassigned peptidases	MER0057486	lon2	Tcr_1548
SJ	S16	unassigned	family S16 unassigned peptidases	MER0057476		Tcr_0955
SK	S14	S14.001	peptidase Clp (type 1)	MER0057480	clpP	Tcr_1177
SK	S41	S41.004	C-terminal processing peptidase-3	MER0057491		Tcr_1781
SK	S49	S49.003	protein C (bacteriophage lambda)	MER0057218		Tcr_0680
SK	S49	unassigned	subfamily S49B unassigned peptidases	MER0057225		Tcr_1144
SK	S49	unassigned	subfamily S49B unassigned peptidases	MER0057475		Tcr_0946
U-	U32	U32.002	collagenase (Helicobacter-type)	MER0057233		Tcr_1312
U-	U49	unassigned	family U49 unassigned peptidases	MER0201941		Tcr_0367

GENOME ANALYSIS: Comparison with 9 completely sequenced genomes from family Piscirickettsiaceae
Family	Comment
A31	significant presence (1 homologues)
C44	lineage specific expansion (5 homologues)
C93	significant presence (1 homologues)
G5	significant presence (1 homologues)
M14	significant presence (1 homologues)
M16	significant decrease in homologues (3 homologues)
N6	significant presence (1 homologues)
S9	significant presence (2 homologues)
S12	significant presence (2 homologues)
S13	significant presence (1 homologues)
S16	significant decrease in homologues (4 homologues)
U49	significant presence (1 homologues)