Desulfovibrio desulfuricans

Taxonomy
Taxonomy database identifier: 876
Superkingdom Bacteria
Phylum Proteobacteria
Class Deltaproteobacteria
Order Desulfovibrionales
Family Desulfovibrionaceae
Genus Desulfovibrio
Species desulfuricans
Peptidase View peptidase sequences from Desulfovibrio desulfuricans
Count of known and putative peptidases: 153, non-peptidase homologues 49
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0153172 lspA Ddes_0386
AC A8 unassigned family A8 unassigned peptidases MER1155367
AC A8 unassigned family A8 unassigned peptidases MER0286318 lspA DND132_0387
AC A8 unassigned family A8 unassigned peptidases MER0021504 lspA Dde_2143
AD A24 A24.019 ComC peptidase MER0286431 DND132_3188
AD A24 unassigned subfamily A24A unassigned peptidases MER0286466 DND132_2951
AE A31 A31.002 HyaD peptidase MER0153182 Ddes_0834
AE A31 unassigned family A31 unassigned peptidases MER0153190 Ddes_1037
AE A31 unassigned family A31 unassigned peptidases MER0286189 DND132_3245
AE A31 unassigned family A31 unassigned peptidases MER0023974 Dde_2139
AE A31 unassigned family A31 unassigned peptidases MER0023975 Dde_2136
CA C39 non-peptidase homologue family C39 non-peptidase homologues MER0715983 DND132_1282
CA C93 unassigned family C93 unassigned peptidases MER0392314 Ddes_1153
CA C93 unassigned family C93 unassigned peptidases MER0393085 DND132_1280
CD C11 unassigned subfamily C11A unassigned peptidases MER1170163
CD C14 unassigned subfamily C14B unassigned peptidases MER0286448 DND132_2913
CD C14 unassigned subfamily C14B unassigned peptidases MER0286457 DND132_2920
CL C82 unassigned subfamily C82A unassigned peptidases MER0153151 Ddes_0097
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0153217 Ddes_1599
CO C40 unassigned family C40 unassigned peptidases MER0153221 Ddes_1768
CO C40 unassigned family C40 unassigned peptidases MER0153142 Ddes_0021
CO C40 unassigned family C40 unassigned peptidases MER0286391 DND132_2836
CO C40 unassigned family C40 unassigned peptidases MER0023957 Dde_0124
G- G5 unassigned family G5 unassigned peptidases MER0937640 DND132_1212
MA M41 M41.021 FtsH peptidase (Thermotoga-type) MER0286382 ftsH DND132_0879
MA M41 M41.021 FtsH peptidase (Thermotoga-type) MER0023983 ftsH1 Dde_1513
MA M41 unassigned family M41 unassigned peptidases MER0023962 ftsH2 Dde_3415
MA M41 unassigned family M41 unassigned peptidases MER0153219 ftsH Ddes_1717
MA M48 unassigned subfamily M48A unassigned peptidases MER0286181 DND132_3211
MA M48 unassigned subfamily M48A unassigned peptidases MER0023958 Dde_0070
MA M48 unassigned subfamily M48B unassigned peptidases MER0153231 htpX Ddes_2054
MA M48 unassigned subfamily M48B unassigned peptidases MER0286198 htpX DND132_2631
MA M48 unassigned subfamily M48B unassigned peptidases MER0027457 Dde_2161
MA M48 unassigned subfamily M48C unassigned peptidases MER0153212 Ddes_1448
MA M48 unassigned subfamily M48C unassigned peptidases MER0286229 DND132_0341
MA M48 unassigned subfamily M48C unassigned peptidases MER0286192 DND132_2612
MA M48 unassigned subfamily M48C unassigned peptidases MER0286425 DND132_3173
MA M61 non-peptidase homologue family M61 non-peptidase homologues MER0903374 Ddes_0896
MA M61 non-peptidase homologue family M61 non-peptidase homologues MER0900243 DND132_0497
MD M15 non-peptidase homologue subfamily M15A non-peptidase homologues MER0153156 Ddes_0248
MD M15 non-peptidase homologue subfamily M15A non-peptidase homologues MER0021916 Dde_3367
ME M16 M16.012 PreP1 peptidase (Arabidopsis-type) MER0153170 Ddes_0345
ME M16 M16.012 PreP1 peptidase (Arabidopsis-type) MER0286361 DND132_2415
ME M16 M16.012 PreP1 peptidase (Arabidopsis-type) MER0023967 Dde_2677
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0153193 Ddes_1070
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0286364 DND132_0819
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0063219 Dde_1699
ME M16 unassigned subfamily M16B unassigned peptidases MER0286363 DND132_0819
ME M16 unassigned subfamily M16B unassigned peptidases MER0063218 Dde_1699
ME M16 unassigned subfamily M16B unassigned peptidases MER0027470 Dde_0444
ME M16 unassigned family M16 unassigned peptidases MER0153192 Ddes_1070
MF M17 unassigned family M17 unassigned peptidases MER0153238 pepA Ddes_2206
MF M17 unassigned family M17 unassigned peptidases MER0023981 pepA Dde_0568
MG M24 non-peptidase homologue subfamily M24B non-peptidase homologues MER0483421 DND132_0645
MG M24 non-peptidase homologue subfamily M24B non-peptidase homologues MER0286341 DND132_1424
MG M24 unassigned subfamily M24A unassigned peptidases MER0153175 Ddes_0681
MG M24 unassigned subfamily M24A unassigned peptidases MER0286378 map DND132_3421
MG M24 unassigned subfamily M24A unassigned peptidases MER0023972 Dde_2236
MG M24 unassigned subfamily M24B unassigned peptidases MER0153237 Ddes_2198
MG M24 unassigned subfamily M24B unassigned peptidases MER0286447 DND132_1958
MG M24 unassigned subfamily M24B unassigned peptidases MER0023969 Dde_0217
MG M24 unassigned subfamily M24B unassigned peptidases MER0027443 Dde_0811
MH M18 unassigned family M18 unassigned peptidases MER0153220 Ddes_1741
MH M18 unassigned family M18 unassigned peptidases MER0286441 DND132_0951
MH M18 unassigned family M18 unassigned peptidases MER0023964 Dde_3061
MH M20 M20.020 p-aminobenzoyl-glutamate hydrolase subunit A MER0373896 DND132_1409
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0812829 DND132_1268
MH M20 unassigned family M20D unassigned peptidases MER0023965 Dde_3033
MH M20 unassigned family M20D unassigned peptidases MER0023968 Dde_2667
MH M20 unassigned family M20 unassigned peptidases MER0153228 Ddes_1933
MH M20 unassigned family M20 unassigned peptidases MER0286410 DND132_0518
MH M20 unassigned family M20 unassigned peptidases MER0286247 DND132_1352
MH M20 unassigned family M20 unassigned peptidases MER0023980 Dde_1810
MH M20 unassigned family M20 unassigned peptidases MER0023982 Dde_1267
MJ M38 M38.982 urease MER0286345 ureC DND132_1434
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0153223 pyrC Ddes_1870
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0153224 Ddes_1874
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0153227 mtaD Ddes_1931
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0286409 mtaD DND132_0516
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0286195 DND132_2614
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0286420 DND132_3138
MJ M38 unassigned family M38 unassigned peptidases MER0286244 DND132_1345
MM M50 non-peptidase homologue subfamily M50B non-peptidase homologues MER0895510 DND132_1131
MM M50 unassigned subfamily M50A unassigned peptidases MER0893333 DND132_0005
MM M50 unassigned subfamily M50B unassigned peptidases MER0153145 Ddes_0033
MM M50 unassigned subfamily M50B unassigned peptidases MER0153174 Ddes_0515
MO M23 M23.009 Mername-AA292 peptidase MER0153140 Ddes_0002
MO M23 M23.011 YebA peptidase MER0023970 Dde_0243
MO M23 M23.014 ShyA D,D-endopeptidase (Vibrio cholerae) MER0153186 Ddes_0953
MO M23 M23.014 ShyA D,D-endopeptidase (Vibrio cholerae) MER0286338 DND132_3006
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0286400 DND132_0496
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0023959 Dde_3784
MO M23 unassigned subfamily M23B unassigned peptidases MER0153200 Ddes_1189
MO M23 unassigned subfamily M23B unassigned peptidases MER0153235 Ddes_2159
MO M23 unassigned subfamily M23B unassigned peptidases MER0153189 Ddes_1006
MO M23 unassigned subfamily M23B unassigned peptidases MER0286468 DND132_0252
MO M23 unassigned subfamily M23B unassigned peptidases MER0286184 DND132_0657
MO M23 unassigned subfamily M23B unassigned peptidases MER0286339 DND132_3007
MO M23 unassigned subfamily M23B unassigned peptidases MER0023963 Dde_3154
MO M23 unassigned subfamily M23B unassigned peptidases MER0023973 Dde_2203
MO M23 unassigned subfamily M23B unassigned peptidases MER0023976 Dde_2079
MQ M29 non-peptidase homologue family M29 non-peptidase homologues MER0286282 DND132_3337
MQ M29 unassigned family M29 unassigned peptidases MER0286393 DND132_1105
MQ M29 unassigned family M29 unassigned peptidases MER0023966 Dde_2758
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0405383 flhB Ddes_0332
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0286185 DND132_0659
PA S1 unassigned subfamily S1C unassigned peptidases MER0153184 Ddes_0890
PA S1 unassigned subfamily S1C unassigned peptidases MER0153202 Ddes_1208
PA S1 unassigned subfamily S1C unassigned peptidases MER0153207 Ddes_1311
PA S1 unassigned subfamily S1C unassigned peptidases MER0286199 DND132_2632
PA S1 unassigned subfamily S1C unassigned peptidases MER0286428 DND132_3180
PA S1 unassigned subfamily S1C unassigned peptidases MER0023960 Dde_3776
PA S1 unassigned subfamily S1C unassigned peptidases MER0023961 Dde_3420
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0153232 Ddes_2055
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0153141 Ddes_0008
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0286436 DND132_0935
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0023971 Dde_0334
PB C44 C44.A09 PF0204 protein (Pyrococcus furiosus ) MER0458481 DND132_0485
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0153241 Ddes_2371
PB C44 unassigned family C44 unassigned peptidases MER0153199 Ddes_1155
PB C44 unassigned family C44 unassigned peptidases MER0023984 Dde_0502
PB C45 unassigned family C45 unassigned peptidases MER0306010 DND132_0096
PB C69 unassigned family C69 unassigned peptidases MER0386753 DND132_3344
PB T1 T01.007 CodW component of CodWX peptidase MER0062036 hslV Dde_2124
PB T1 T01.007 CodW component of CodWX peptidase MER0153213 hslV Ddes_1449
PB T1 T01.007 CodW component of CodWX peptidase MER0286423 hslV DND132_3168
PB T2 unassigned family T2 unassigned peptidases MER0025724 Dde_2284
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0153230 Ddes_2027
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0025727 Dde_1641
PC C26 C26.957 GMP synthase MER0153222 guaA Ddes_1806
PC C26 C26.957 GMP synthase MER0286271 guaA DND132_3316
PC C26 C26.960 TrpD protein (anthranilate synthase component II) MER0153216 Ddes_1591
PC C26 C26.964 CTP synthetase MER0153187 pyrG Ddes_0975
PC C26 C26.964 CTP synthetase MER0448401 pyrG DND132_0547
PC C26 C26.A25 trp1 (Schizosaccharomyces pombe) MER0439125 DND132_3197
PC C26 C26.A32 imidazoleglycerol-phosphate synthase (Pyrococcus furiosus) MER0153226 pdxT Ddes_1897
PC C26 non-peptidase homologue family C26 non-peptidase homologues MER0153236 Ddes_2177
PC C26 unassigned family C26 unassigned peptidases MER0153150 hisH Ddes_0090
PC C26 unassigned family C26 unassigned peptidases MER0153194 carA Ddes_1097
PC C26 unassigned family C26 unassigned peptidases MER0286386 DND132_0103
PC C26 unassigned family C26 unassigned peptidases MER0444564 hisH DND132_0649
PC C26 unassigned family C26 unassigned peptidases MER0286191 DND132_2611
PC C26 unassigned family C26 unassigned peptidases MER0286292 carA DND132_3376
PC C56 C56.001 PfpI peptidase MER0023977 Dde_1646
PC C56 C56.A06 DDB_G0276405 (Dictyostelium discoideum) MER0153210 Ddes_1402
PC C56 C56.A06 DDB_G0276405 (Dictyostelium discoideum) MER0286387 DND132_1858
PC C56 C56.A06 DDB_G0276405 (Dictyostelium discoideum) MER0023978 Dde_1169
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0153188 Ddes_0976
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0153147 Ddes_0049
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0153148 Ddes_0050
PE T5 unassigned family T5 unassigned peptidases MER0153233 argJ Ddes_2068
PE T5 unassigned family T5 unassigned peptidases MER0286340 argJ DND132_2070
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0153229 Ddes_1988
SC S9 unassigned subfamily S9C unassigned peptidases MER0153205 Ddes_1295
SC S33 unassigned family S33 unassigned peptidases MER0153206 Ddes_1307
SC S33 unassigned family S33 unassigned peptidases MER0153208 Ddes_1333
SC S33 unassigned family S33 unassigned peptidases MER0153214 Ddes_1453
SC S33 unassigned family S33 unassigned peptidases MER0286226 DND132_0327
SE S11 S11.005 D-Ala-D-Ala carboxypeptidase DacF MER0153165 Ddes_0284
SE S11 S11.005 D-Ala-D-Ala carboxypeptidase DacF MER0153191 Ddes_1041
SE S11 unassigned family S11 unassigned peptidases MER0943152 DES-1
SF S24 S24.001 repressor LexA MER0025729 lexA Dde_0893
SF S24 S24.003 UmuD protein MER0286197 DND132_2624
SF S24 S24.003 UmuD protein MER0025721 Dde_2974
SF S24 non-peptidase homologue family S24 non-peptidase homologues MER1041882 DND132_1792
SF S24 unassigned family S24 unassigned peptidases MER0153178 Ddes_0726
SF S24 unassigned family S24 unassigned peptidases MER0153180 Ddes_0819
SF S24 unassigned family S24 unassigned peptidases MER1038735 DND132_1591
SF S26 S26.025 signal peptidase sipX MER0153163 Ddes_0282
SF S26 S26.025 signal peptidase sipX MER0025722 Dde_2816
SF S26 S26.025 signal peptidase sipX MER0246516 DND132_1720
SF S26 unassigned subfamily S26A unassigned peptidases MER0246811 DND132_1123
SH S73 S73.001 gpO peptidase (Enterobacteria phage P2) MER0151052
SJ S16 S16.001 Lon-A peptidase MER0153177 Ddes_0694
SJ S16 S16.001 Lon-A peptidase MER0153218 lon Ddes_1626
SJ S16 S16.001 Lon-A peptidase MER0286467 lon DND132_0250
SJ S16 S16.001 Lon-A peptidase MER0286270 lon DND132_1691
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0153211 Ddes_1432
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0286205 DND132_2667
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0153164 Ddes_0283
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0286246 DND132_2301
SJ S16 unassigned family S16 unassigned peptidases MER0153203 Ddes_1288
SJ S16 unassigned family S16 unassigned peptidases MER0286322 DND132_0398
SJ S16 unassigned family S16 unassigned peptidases MER0286408 DND132_1175
SJ S16 unassigned family S16 unassigned peptidases MER0286293 DND132_2722
SJ S16 unassigned family S16 unassigned peptidases MER0025728 Dde_2007
SK S14 S14.001 peptidase Clp (type 1) MER0153176 clpP Ddes_0691
SK S14 S14.001 peptidase Clp (type 1) MER0286463 clpP DND132_0248
SK S14 S14.001 peptidase Clp (type 1) MER0025725 clpP Dde_2220
SK S41 S41.004 C-terminal processing peptidase-3 MER0153185 Ddes_0896
SK S41 S41.004 C-terminal processing peptidase-3 MER0286401 DND132_0497
SK S41 S41.004 C-terminal processing peptidase-3 MER0025730 Dde_1437
SK S49 non-peptidase homologue subfamily S49A unassigned non-peptidase homologues MER0025731 Dde_1442
SK S49 non-peptidase homologue subfamily S49A unassigned non-peptidase homologues MER1065980 DND132_2537
SK S49 unassigned subfamily S49B unassigned peptidases MER0153240 Ddes_2329
SK S49 unassigned subfamily S49B unassigned peptidases MER1070196 DND132_1728
SK S49 unassigned subfamily S49B unassigned peptidases MER0025733 Dde_0508
ST S54 S54.027 RhoII peptidase (Haloferax volcanii) and similar MER0025732 Dde_1446
ST S54 S54.027 RhoII peptidase (Haloferax volcanii) and similar MER0286275 DND132_3327
ST S54 unassigned family S54 unassigned peptidases MER0153209 Ddes_1385
ST S54 unassigned family S54 unassigned peptidases MER1075762 DND132_3254
U- U32 unassigned family U32 unassigned peptidases MER0153143 Ddes_0024
U- U32 unassigned family U32 unassigned peptidases MER0153144 Ddes_0024
U- U32 unassigned family U32 unassigned peptidases MER0286433 DND132_0928
U- U32 unassigned family U32 unassigned peptidases MER0286342 DND132_2090
U- U32 unassigned family U32 unassigned peptidases MER0286413 DND132_2142
U- U32 unassigned family U32 unassigned peptidases MER0025719 Dde_0058
U- U32 unassigned family U32 unassigned peptidases MER0025720 Dde_3095
U- U69 unassigned family U69 unassigned peptidases MER0286405 DND132_1168
U- U69 unassigned family U69 unassigned peptidases MER0286406 DND132_1168
U- U69 unassigned family U69 unassigned peptidases MER0286407 DND132_1168

GENOME ANALYSIS: Comparison with 19 completely sequenced genomes from genus Desulfovibrio
Family Comment
A8 lineage specific expansion (4 homologues)
A31 lineage specific expansion (5 homologues)
C11 significant presence (1 homologues)
C26 lineage specific expansion (14 homologues)
C69 significant presence (1 homologues)
M16 lineage specific expansion (10 homologues)
M20 lineage specific expansion (9 homologues)
M23 lineage specific expansion (15 homologues)
M24 lineage specific expansion (9 homologues)
M41 lineage specific expansion (4 homologues)
M48 lineage specific expansion (9 homologues)
S26 lineage specific expansion (4 homologues)
S73 significant presence (1 homologues)
T2 significant presence (1 homologues)
U32 lineage specific expansion (7 homologues)
U69 significant presence (3 homologues)