Sequence features for U32.001: collagenase (Porphyromonas-type)

Summary Alignment Tree Sequences Sequence features Distribution Structure Literature

 

MERNUM Species Sequence length Peptidase unit Active site residues Source
MER0111494 Akkermansia muciniphila 423   UNIPROT:B2URM8
MER0111494 Akkermansia muciniphila 423   UNIPROT:B2URM8
MER0403236 Alistipes finegoldii 414   UNIPROT:I3YKV0
MER0403236 Alistipes finegoldii 414   UNIPROT:I3YKV0
MER0499990 Bacteroidales bacterium CF 419   GENBANK:YP_008618251
MER0142058 Bacteroides caccae 429   UNIPROT:A5ZEJ1
MER0142058 Bacteroides caccae 429   UNIPROT:A5ZEJ1
MER0166872 Bacteroides coprocola 420   GENBANK:ZP_03010793
MER0164279 Bacteroides dorei 428   GENBANK:ZP_03300455
MER0235050 Bacteroides helcogenes 433   GENBANK:YP_004160406
MER0180209 Bacteroides intestinalis 427   GENBANK:ZP_03013426
MER0403228 Bacteroides nordii 423   GENBANK:ZP_10373921
MER0170447 Bacteroides ovatus 431   GENBANK:ZP_02065737
MER0142292 Bacteroides plebeius 423   UNIPROT:B5CV96
MER0142292 Bacteroides plebeius 423   UNIPROT:B5CV96
MER0239913 Bacteroides salanitronis 420   GENBANK:YP_004259508
MER0403227 Bacteroides salyersiae 421   GENBANK:ZP_10370843
MER0164278 Bacteroides sp. 1_1_14 427   GENBANK:ZP_06995378
MER0164281 Bacteroides sp. 3_1_33 420   GENBANK:ZP_06088388
MER0164282 Bacteroides sp. 3_1_40A 420   GENBANK:ZP_07994852
MER0164283 Bacteroides sp. 4_3_47FAA 420   GENBANK:ZP_08796624
MER0164280 Bacteroides sp. 9_1_42 420   GENBANK:ZP_04541894
MER0165491 Bacteroides stercoris 430   GENBANK:ZP_02436047
MER0028083 Bacteroides thetaiotaomicron 427   GENBANK:NP_811984
MER0142151 Bacteroides uniformis 430   GENBANK:ZP_02072702
MER0061555 Bacteroides vulgatus 420   GENBANK:YP_001298397
MER0499435 Bacteroides xylanisolvens 429   GENBANK:YP_007792817
MER0146078 Candidatus Azobacteroides pseudotrichonymphae 415   GENBANK:YP_002309278
MER0223356 Candidatus Sulcia muelleri 412   GENBANK:YP_003880558
MER0325470 Candidatus Sulcia muelleri 416   UNIPROT:C7LJZ3
MER0325470 Candidatus Sulcia muelleri 416   UNIPROT:C7LJZ3
MER0255210 Capnocytophaga canimorsus 417   GENBANK:YP_004739275
MER0064277 Capnocytophaga ochracea 416   UNIPROT:C7M3N4
MER0064277 Capnocytophaga ochracea 416   UNIPROT:C7M3N4
MER0403235 Capnocytophaga sp. oral taxon 412 416   GENBANK:ZP_10368045
MER0124195 Chlorobaculum parvum 412   GENBANK:YP_001997945
MER0056688 Chlorobium chlorochromatii 422   GENBANK:YP_378863
MER0085613 Chlorobium ferrooxidans 418   UNIPROT:Q0YRX0
MER0085613 Chlorobium ferrooxidans 418   UNIPROT:Q0YRX0
MER0051087 Chlorobium limicola 413   GENBANK:YP_001944100
MER0051004 Chlorobium phaeobacteroides 420   GENBANK:EAM35566
MER0051369 Chlorobium phaeobacteroides 435   GENBANK:EAM62774
MER0051375 Chlorobium phaeobacteroides 415   GENBANK:EAM63353
MER0051828 Chlorobium phaeovibrioides 416   GENBANK:YP_001129883
MER0019918 Chlorobium tepidum 411   UNIPROT:Q8KB99
MER0019918 Chlorobium tepidum 411   UNIPROT:Q8KB99
MER0202668 Coraliomargarita akajimensis 422   UNIPROT:D5EQR4
MER0202668 Coraliomargarita akajimensis 422   UNIPROT:D5EQR4
MER0142486 Flammeovirga yaeyamensis 256   UNIPROT:B1A1I0
MER0142486 Flammeovirga yaeyamensis 256   UNIPROT:B1A1I0
MER0142414 Flavobacteria bacterium BAL38 413   UNIPROT:A3J3C1
MER0142414 Flavobacteria bacterium BAL38 413   UNIPROT:A3J3C1
MER0083639 Flavobacteriales bacterium HTCC2170 413   UNIPROT:A4ANZ5
MER0083639 Flavobacteriales bacterium HTCC2170 413   UNIPROT:A4ANZ5
MER0274633 Flavobacterium branchiophilum 411   GENBANK:YP_004842475
MER0282241 Flavobacterium columnare 413   GENBANK:YP_004942306
MER0325456 Flavobacterium indicum 413   UNIPROT:H8XS54
MER0325456 Flavobacterium indicum 413   UNIPROT:H8XS54
MER0084713 Flavobacterium johnsoniae 413   GENBANK:YP_001193256
MER0403233 Flavobacterium sp. F52 413   GENBANK:ZP_10481741
MER0227216 Leadbetterella byssophila 415   GENBANK:YP_003999551
MER0124618 Lentisphaera araneosa 416   UNIPROT:A6DU31
MER0124618 Lentisphaera araneosa 416   UNIPROT:A6DU31
MER0403237 Melioribacter roseus 403   UNIPROT:I6ZZR7
MER0403237 Melioribacter roseus 403   UNIPROT:I6ZZR7
MER0403231 Myroides injenensis 413   GENBANK:ZP_10783729
MER0325451 Odoribacter splanchnicus 418   UNIPROT:F9ZCH9
MER0325451 Odoribacter splanchnicus 418   UNIPROT:F9ZCH9
MER0403229 Ornithobacterium rhinotracheale 414   UNIPROT:I3ZY33
MER0403229 Ornithobacterium rhinotracheale 414   UNIPROT:I3ZY33
MER0095669 Parabacteroides distasonis 419   GENBANK:YP_001304519
MER0168779 Parabacteroides johnsonii 423   GENBANK:ZP_03474727
MER0165628 Parabacteroides merdae 423   GENBANK:ZP_02030140
MER0142334 Pedobacter sp. BAL39 412   UNIPROT:A6E6N4
MER0142334 Pedobacter sp. BAL39 412   UNIPROT:A6E6N4
MER0058956 Pelodictyon luteolum 420   GENBANK:YP_374225
MER0049965 Pelodictyon phaeoclathratiforme 413   UNIPROT:B4SF99
MER0049965 Pelodictyon phaeoclathratiforme 413   UNIPROT:B4SF99
MER0003242 Porphyromonas gingivalis 330   UNIPROT:O24788
MER0003242 Porphyromonas gingivalis 330   UNIPROT:O24788
MER0003242 Porphyromonas gingivalis 330   UNIPROT:O24788
MER0039180 Porphyromonas gingivalis 417   UNIPROT:B2RI91
MER0039180 Porphyromonas gingivalis 417   UNIPROT:B2RI91
MER0039180 Porphyromonas gingivalis 417   UNIPROT:B2RI91
MER0039180 Porphyromonas gingivalis 417   UNIPROT:B2RI91
MER0039180 Porphyromonas gingivalis 417   UNIPROT:B2RI91
MER0160843 Prevotella copri 421   GENBANK:ZP_03615455
MER0242807 Prevotella denticola 414   GENBANK:YP_004328241
MER0325439 Prevotella intermedia 415   UNIPROT:I1YUK9
MER0325439 Prevotella intermedia 415   UNIPROT:I1YUK9
MER0203653 Prevotella ruminicola 415   UNIPROT:D5EYQ4
MER0203653 Prevotella ruminicola 415   UNIPROT:D5EYQ4
MER0049998 Prosthecochloris aestuarii 414   UNIPROT:B4S4P1
MER0049998 Prosthecochloris aestuarii 414   UNIPROT:B4S4P1
MER0325457 Riemerella anatipestifer 414   UNIPROT:E4TC68
MER0325457 Riemerella anatipestifer 414   UNIPROT:E4TC68
MER0253094 Spirochaeta caldaria 411   GENBANK:YP_004697673
MER0285540 Tannerella forsythia 420   GENBANK:YP_005014246
MER0142648 Verrucomicrobiae bacterium DG1235 427   UNIPROT:B5JJP4
MER0142648 Verrucomicrobiae bacterium DG1235 427   UNIPROT:B5JJP4
MER0240476 Weeksella virosa 430   GENBANK:YP_004238193
MER0204048 Zunongwangia profunda 413   UNIPROT:D5BBL6
MER0204048 Zunongwangia profunda 413   UNIPROT:D5BBL6