Flavobacterium indicum

Taxonomy
Taxonomy database identifier: 312277
Superkingdom Bacteria
Phylum Bacteroidetes
Class Flavobacteria
Order Flavobacteriales
Family Flavobacteriaceae
Genus Flavobacterium
Species indicum
Peptidase View peptidase sequences from Flavobacterium indicum
Count of known and putative peptidases: 58, non-peptidase homologues 38
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0152112
CA C39 C39.001 bacteriocin-processing peptidase MER0152115
CA C39 C39.001 bacteriocin-processing peptidase MER0152631
CD C25 unassigned family C25 unassigned peptidases MER0152337
CO C40 C40.009 NLP/P60 (Nostoc punctiforme)-like putative peptidase MER0152535
CO C40 unassigned family C40 unassigned peptidases MER0152691
MA M1 unassigned family M1 unassigned peptidases MER0151902
MA M1 unassigned family M1 unassigned peptidases MER0152110
MA M1 unassigned family M1 unassigned peptidases MER0152493
MA M1 unassigned family M1 unassigned peptidases MER0152504
MA M1 unassigned family M1 unassigned peptidases MER0153406
MA M3 unassigned subfamily M3A unassigned peptidases MER0152266
MA M4 unassigned family M4 unassigned peptidases MER0152226
MA M13 unassigned family M13 unassigned peptidases MER0152109
MA M36 unassigned family M36 unassigned peptidases MER0153692
MA M41 M41.A17 DDB_G0284249 g.p. (Dictyostelium discoideum) MER0152685
MA M43 M43.007 ulilysin (Methanosarcina acetivorans) MER0152602
MA M43 unassigned subfamily M43B unassigned peptidases MER0152649
MA M43 unassigned subfamily M43B unassigned peptidases MER0153821
MA M48 unassigned subfamily M48C unassigned peptidases MER0886625
MA M54 unassigned family M54 unassigned peptidases MER0152609
MA M56 unassigned family M56 unassigned peptidases MER0935179
MA M61 unassigned family M61 unassigned peptidases MER0152692
MA M90 unassigned family M90 unassigned peptidases MER0906426
MC M14 non-peptidase homologue subfamily M14B non-peptidase homologues MER0469092
MC M14 non-peptidase homologue family M14 non-peptidase homologues MER0835505
MC M14 non-peptidase homologue family M14 non-peptidase homologues MER0469292
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0152133
ME M16 unassigned subfamily M16B unassigned peptidases MER0152132
MG M24 unassigned subfamily M24A unassigned peptidases MER0153473
MG M24 unassigned subfamily M24B unassigned peptidases MER0154534
MH M20 M20.003 peptidase T MER0152442
MH M20 unassigned subfamily M20C unassigned peptidases MER0152495
MH M20 unassigned subfamily M20F unassigned peptidases MER0152114
MH M28 unassigned subfamily M28B unassigned peptidases MER0152763
MH M28 unassigned subfamily M28F unassigned peptidases MER0152505
MH M28 unassigned family M28 unassigned peptidases MER0212220
MH M42 unassigned family M42 unassigned peptidases MER0152431
MJ M38 M38.978 dihydropyrimidinase related protein-5 MER0862549
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0154533
MJ M38 unassigned family M38 unassigned peptidases MER0152469
MM M50 unassigned family M50 unassigned peptidases MER0152111
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0154549
MO M23 non-peptidase homologue family M23 non-peptidase homologues MER0154467
MO M23 non-peptidase homologue family M23 non-peptidase homologues MER0155041
MO M23 unassigned subfamily M23B unassigned peptidases MER0152679
MO M23 unassigned subfamily M23B unassigned peptidases MER0153161
MO M23 unassigned subfamily M23B unassigned peptidases MER0153630
PA S1 unassigned subfamily S1C unassigned peptidases MER0152689
PA S1 unassigned subfamily S1C unassigned peptidases MER0153472
PA S46 S46.002 dipeptidyl-peptidase 11 (Porphyromonas gingivalis-type) MER0152303
PA S46 S46.002 dipeptidyl-peptidase 11 (Porphyromonas gingivalis-type) MER0153631
PB C44 C44.976 AsnB protein MER0152190
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0152409
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0152672
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0153966
PB C44 unassigned family C44 unassigned peptidases MER0455716
PB T2 unassigned family T2 unassigned peptidases MER0152191
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0152628
PC C26 C26.957 GMP synthase MER0152597
PC C26 C26.964 CTP synthetase MER0450058
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0152616
PC C26 unassigned family C26 unassigned peptidases MER0152336
PC C56 C56.972 phosphoribosylformylglycinamidine synthase MER0152684
PC S51 S51.002 alpha-aspartyl dipeptidase (eukaryote) MER0153405
SB S8 unassigned subfamily S8A unassigned peptidases MER0152104
SB S8 unassigned subfamily S8A unassigned peptidases MER0152598
SC S9 S09.010 oligopeptidase B MER0153117
SC S9 S09.017 prolyl tripeptidyl peptidase MER0152443
SC S9 S09.075 dipeptidyl-peptidase 5 (Porphyromonas sp.) MER0404995
SC S9 S09.946 BSU33620 g.p. (Bacillus subtilis) and similar MER0154548
SC S9 S09.A96 DDB_G0281415 g.p. (Dictyostelium discoideum) MER0152657
SC S9 unassigned subfamily S9A unassigned peptidases MER0152116
SC S9 unassigned subfamily S9A unassigned peptidases MER0153964
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0152120
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0152209
SC S33 unassigned family S33 unassigned peptidases MER0152492
SC S33 unassigned family S33 unassigned peptidases MER0152681
SC S33 unassigned family S33 unassigned peptidases MER0153169
SE S12 S12.A03 EcHS_A2566 protein (Escherichia coli) MER0152624
SE S12 S12.A23 GYO_0385 g.p. (Bacillus subtilis) MER0152107
SE S12 unassigned family S12 unassigned peptidases MER0152117
SE S12 unassigned family S12 unassigned peptidases MER0152422
SE S12 unassigned family S12 unassigned peptidases MER0152489
SE S12 unassigned family S12 unassigned peptidases MER0152594
SF S24 S24.003 UmuD protein MER0152106
SF S26 unassigned subfamily S26A unassigned peptidases MER0152708
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0154458
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0152600
SJ S16 unassigned family S16 unassigned peptidases MER0152491
SK S14 S14.001 peptidase Clp (type 1) MER0152121
SK S41 S41.001 C-terminal processing peptidase-1 MER0152140
SK S41 non-peptidase homologue subfamily S41A non-peptidase homologues MER1059142
SK S41 unassigned subfamily S41A unassigned peptidases MER1347854
SK S41 unassigned subfamily S41A unassigned peptidases MER0151674
SK S41 unassigned subfamily S41A unassigned peptidases MER0153744
SK S49 S49.001 signal peptide peptidase A (Pseudomonas aeruginosa) MER0153691
SS S66 unassigned family S66 unassigned peptidases MER0154512
ST S54 S54.025 At5g25752 rhomboid peptidase MER0152667
ST S54 unassigned family S54 unassigned peptidases MER1078797
ST S54 unassigned family S54 unassigned peptidases MER1083471
ST S54 unassigned family S54 unassigned peptidases MER0152710
U- U32 U32.001 collagenase (Porphyromonas-type) MER0325456
U- U32 unassigned family U32 unassigned peptidases MER0404224

GENOME ANALYSIS: Comparison with 49 completely sequenced genomes from family Flavobacteriaceae
Family Comment
G4 significant presence (1 homologues)
M54 significant presence (1 homologues)