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Literature for peptidase C01.001: papain

Summary Alignment Sequences Sequence features Distribution Structure Literature Substrates Inhibitors Pharma

(References are filtered for relevance to Structure. To remove the filter click here. See explanation.)

    2020
  1. Wang,X., Gao,Y., Guan,Z., Xie,Z., Zhang,D., Yin,P., Yang,G., Hong,D. and Xin,Q.
    Structural analysis of the meiosis-related protein MS5 reveals non-canonical papain enhancement by cystatin-like folds
    FEBS Lett (2020) 594, 2462-2471. PubMed  Europe PubMed DOI  S
    2. 2008
  2. Beavers,M.P., Myers,M.C., Shah,P.P., Purvis,J.E., Diamond,S.L., Cooperman,B.S., Huryn,D.M. and Smith,A.B., III
    Molecular docking of cathepsin L inhibitors in the binding site of papain
    J Chem Inf Model (2008) 48, 1464-1472. PubMed  Europe PubMed DOI  S  I
    3. 2006
  3. [YEAR:1-6-2006]Alphey,M.S. and Hunter,W.N.
    High-resolution complex of papain with remnants of a cysteine protease inhibitor derived from Trypanosoma brucei
    Acta Crystallograph Sect F Struct Biol Cryst Commun (1-6-2006) 62, 504-508. PubMed  Europe PubMed DOI  PMC  EPMC  S
    4. 2004
  4. Janowski,R., Kozak,M., Jankowska,E., Grzonka,Z. and Jaskolski,M.
    Two polymorphs of a covalent complex between papain and a diazomethylketone inhibitor
    J Pept Res (2004) 64, 141-150. PubMed  Europe PubMed DOI  S  I
    5. 1999
  5. [YEAR:20-12-1999]Tsuge,H., Nishimura,T., Tada,Y., Asao,T., Turk,D., Turk,V. and Katunuma,N.
    Inhibition mechanism of cathepsin L-specific inhibitors based on the crystal structure of papain-CLIK148 complex
    Biochem Biophys Res Commun (20-12-1999) 266, 411-416. PubMed  Europe PubMed DOI  S  I
    6. 1998
  6. [YEAR:5-11-1998]LaLonde,J.M., Zhao,B., Smith,W.W., Janson,C.A., DesJarlais,R.L., Tomaszek,T.A., Carr,T.J., Thompson,S.K., Oh,H.J., Yamashita,D.S., Veber,D.F. and Abdel-Meguid,S.S.
    Use of papain as a model for the structure-based design of cathepsin K inhibitors: crystal structures of two papain-inhibitor complexes demonstrate binding to S'-subsites
    J Med Chem (5-11-1998) 41, 4567-4576. PubMed  Europe PubMed DOI  S  I
  7. [YEAR:3-3-1998]Matsumoto,K., Murata,M., Sumiya,S., Mizoue,K., Kitamura,K. and Ishida,T.
    X-ray crystal structure of papain complexed with cathepsin B-specific covalent-type inhibitor: substrate specificity and inhibitory activity
    Biochim Biophys Acta (3-3-1998) 1383, 93-100. PubMed  Europe PubMed DOI  S  I
    8. 1996
  8. Kandadai,N.S. and Reddy,M.R.
    Solution structure of papain as studied by molecular mechanics and molecular dynamics techniques
    J Comput Chem (1996) 17, 1328-1338. PubMed  Europe PubMed DOI  S
    9. 1993
  9. Schroder,E., Phillips,C., Garman,E., Harlos,K. and Crawford,C.
    X-ray crystallographic structure of a papain-leupeptin complex
    FEBS Lett (1993) 315, 38-42. PubMed  Europe PubMed DOI  S  I
    10. 1992
  10. Kim,M.J., Yamamoto,D., Matsumoto,K., Inoue,M., Ishida,T., Mizuno,H., Sumiya,S. and Kitamura,K.
    Crystal structure of papain-E64-c complex. Binding diversity of E64-c to papain S2 and S3 subsites
    Biochem J (1992) 287, 797-803. PubMed  Europe PubMed  PMC  EPMC  S  I
  11. Pickersgill,R.W., Harris,G.W. and Garman,E.
    Structure of monoclinic papain at 1.60-A resolution
    Acta Crystallogr B (1992) 48, 59-67. DOI  S
  12. Yamamoto,A., Tomoo,K., Doi,M., Ohishi,H., Inoue,M., Ishida,T., Yamamoto,D., Tsuboi,S., Okamoto,H. and Okada,Y.
    Crystal structure of papain-succinyl-Gln-Val-Val-Ala-Ala-p-nitroanilide complex at 1.7-A resolution: noncovalent binding mode of a common sequence of endogenous thiol protease inhibitors
    Biochemistry (1992) 31, 11305-11309. PubMed  Europe PubMed DOI  S
    13. 1991
  13. Yamamoto,D., Matsumoto,K., Ohishi,H., Ishida,T., Inoue,M., Kitamura,K. and Mizuno,H.
    Refined X-ray structure of papain.E-64-c complex at 2.1-A resolution
    J Biol Chem (1991) 266, 14771-14777. PubMed  Europe PubMed  S  I
    14. 1990
  14. Yamamoto,D., Ishida,T. and Inoue,M.
    A comparison between the binding modes of a substrate and inhibitor to papain as observed in complex crystal structures
    Biochem Biophys Res Commun (1990) 171, 711-716. PubMed  Europe PubMed DOI  S  I
  15. Yamamoto,D., Matsumoto,K., Ohishi,H., Ishida,T., Inoue,M., Kitamura,K. and Hanada,K.
    The importance of Val-157 hydrophobic interaction for papain inhibitory activity of an epoxysuccinyl amino acid derivative. A structure-activity relationship based on the crystal structure of the papain-E-64-c complex
    FEBS Lett (1990) 263, 134-136. PubMed  Europe PubMed DOI  S  I
    16. 1989
  16. [YEAR:13-3-1989]Matsumoto,K., Yamamoto,D., Ohishi,H., Tomoo,K., Ishida,T., Inoue,M., Sadatome,T., Kitamura,K. and Mizuno,H.
    Mode of binding of E-64-c, a potent thiol protease inhibitor, to papain as determined by X-ray crystal analysis of the complex
    FEBS Lett (13-3-1989) 245, 177-180. PubMed  Europe PubMed DOI  S  I
  17. Varughese,K.I., Ahmed,F.R., Carey,P.R., Hasnain,S., Huber,C.P. and Storer,A.C.
    Crystal structure of a papain-E-64 complex
    Biochemistry (1989) 28, 1330-1332. PubMed  Europe PubMed  S  I
    18. 1985
  18. Kamphuis,I.G., Drenth,J. and Baker,E.N.
    Thiol proteases. Comparative studies based on the high-resolution structures of papain and actinidin, and on amino acid sequence information for cathepsins B and H, and stem bromelain
    J Mol Biol (1985) 182, 317-329. PubMed  Europe PubMed  S
    19. 1984
  19. Kamphuis,I.G., Kalk,K.H., Swarte,M.B. and Drenth,J.
    Structure of papain refined at 1.65 A resolution
    J Mol Biol (1984) 179, 233-256. PubMed  Europe PubMed  S
    20. 1971
  20. Drenth,J., Jansonius,J.N., Koekoek,R. and Wolthers,B.G.
    The structure of papain
    Adv Protein Chem (1971) 25, 79-115. PubMed  Europe PubMed DOI  S
    21. 1968
  21. Drenth,J., Jansonius,J.N., Koekoek,R., Swen,H.M. and Wolthers,B.G.
    Structure of papain
    Nature (1968) 218, 929-932. PubMed  Europe PubMed DOI  S

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