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Resolution: 2.74 Å
EM Method: Single-particle
Fitted PDBs: 8smv
Q-score: 0.572
Hoppe N, Harrison S, Hwang SH, Chen Z, Karelina M, Deshpande I, Suomivuori CM, Palicharla VR, Berry SP, Tschaikner P, Regele D, Covey DF, Stefan E, Marks DS, Reiter J, Dror RO, Evers AS, Mukhopadhyay S, Manglik A
bioRxiv (2023) [ Pubmed: 37292845 DOI: doi:10.1101/2023.05.23.540554 ]
- Cholesterol (386 Da, Ligand)
- Guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2 (7 kDa, Protein from Homo sapiens)
- G-protein coupled receptor 161 (59 kDa, Protein from Homo sapiens)
- Nanobody 35 (Complex from Lama glama)
- Guanine nucleotide-binding protein g(s) subunit alpha isoforms short (30 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 (40 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2, guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 (Complex from Homo sapiens)
- G-protein coupled receptor 161, guanine nucleotide-binding protein g(s) subunit alpha isoforms short (Complex from Homo sapiens)
- Gpr161 gs heterotrimeric complex with nb35 (Complex)
- Nanobody 35 (15 kDa, Protein from Lama glama)
Structure of the mu opioid receptor bound to the antagonist nanobody NbE
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8qot
Q-score: 0.413
Yu J, Kumar A, Zhang X, Martin C, Raia P, Koehl A, Laeremans T, Steyaert J, Manglik A, Ballet S, Boland A, Stoeber M
bioRxiv (2023) [ DOI: doi:10.1101/2023.12.06.570395 Pubmed: 38106026 ]
- Mor-nbe-nabfab-antifab complex (120 kDa, Complex from Mus musculus)
- Anti-fab nanobody (17 kDa, Protein from Lama glama)
- Nabfab lc (25 kDa, Protein from synthetic construct)
- Nabfab hc (28 kDa, Protein from synthetic construct)
- Mu-type opioid receptor (53 kDa, Protein from Mus musculus)
- Nanobody e (nbe) (18 kDa, Protein from Lama glama)
Propionate bound to human olfactory receptor OR51E2 in complex with miniGs399 (transmembrane domain)
Billesbolle CB, de March CA, van der Velden WJC, Ma N, Tewari J, Del Torrent CL, Li L, Faust B, Vaidehi N, Matsunami H, Manglik A
Nature (2023) 615 pp. 742-749 [ DOI: doi:10.1038/s41586-023-05798-y Pubmed: 36922591 ]
- Or51e2-gs complex (100 kDa, Complex from Homo sapiens)
Human olfactory receptor OR51E2 bound to propionate in complex with miniGs399
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8f76
Q-score: 0.52
Billesbolle CB, de March CA, van der Velden WJC, Ma N, Tewari J, Del Torrent CL, Li L, Faust B, Vaidehi N, Matsunami H, Manglik A
Nature (2023) 615 pp. 742-749 [ DOI: doi:10.1038/s41586-023-05798-y Pubmed: 36922591 ]
- Or51e2-gs complex (100 kDa, Complex from Homo sapiens)
- Propanoic acid (74 Da, Ligand)
- Nanobody 35 (15 kDa, Protein from Lama glama)
- Guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2 (7 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein g(s) subunit alpha isoforms short (30 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 (40 kDa, Protein from Homo sapiens)
- Olfactory receptor 51e2 (36 kDa, Protein from Homo sapiens)
Structure of human serotonin transporter bound to small molecule '8090 in lipid nanodisc and NaCl
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7txt
Q-score: 0.549
Singh I, Seth A, Billesbolle CB, Braz J, Rodriguiz RM, Roy K, Bekele B, Craik V, Huang XP, Boytsov D, Pogorelov VM, Lak P, O'Donnell H, Sandtner W, Irwin JJ, Roth BL, Basbaum AI, Wetsel WC, Manglik A, Shoichet BK, Rudnick G
Cell (2023) 186 pp. 2160-2175.e17 [ DOI: doi:10.1016/j.cell.2023.04.010 Pubmed: 37137306 ]
- 15b8 fab light chain (11 kDa, Protein from Mus musculus)
- Fab15b8 heavy chain (Complex from Mus musculus)
- Human serotonin transporter in complex with fab15b8 bound to '8090 in nacl (Complex)
- 15b8 fab heavy chain (13 kDa, Protein from Mus musculus)
- 1-[4-(4-fluorophenyl)-1,3-thiazol-2-yl]piperazine (263 Da, Ligand)
- Sodium-dependent serotonin transporter (Complex from Homo sapiens)
- Sodium-dependent serotonin transporter (61 kDa, Protein from Homo sapiens)
- Fab15b8 light chain (Complex from Mus musculus)
Single-particle cryo-electron microscopy final particle stacks and .star files from TSHR complexes
Faust B, Billesbølle CB, Suomivuori CM, Singh I, Zhang K, Hoppe N, Pinto AFM, Diedrich JK, Muftuoglu Y, Szkudlinski MW, Saghatelian A, Dror RO, Cheng Y, Manglik A
Nature (2022) [ DOI: 10.1038/s41586-022-05159-1 Pubmed: 35940205 ]
Image sets:
- Final particle stack for M22 Fab-bound TSHR-Gs reconstruction
- Final particle stack for native human TSH-bound TSHR-Gs reconstruction
- Final particle stack for TR1402-bound TSHR-Gs reconstruction
- Final particle stack for CS-17 Fab-bound TSHR Gs reconstruction
Org 2274179-0-bound Thyrotropin Receptor
Faust B, Billesbolle CB, Suomivuori CM, Singh I, Zhang K, Hoppe N, Pinto AFM, Diedrich JK, Muftuoglu Y, Szkudlinski MW, Saghatelian A, Dror RO, Cheng Y, Manglik A
Nature (2022) 609 pp. 846-853 [ Pubmed: 35940205 DOI: doi:10.1038/s41586-022-05159-1 ]
Human thyrotropin analog TR1402 bound to human Thyrotropin receptor (extracellular domain map only)
Faust B, Billesbolle CB, Suomivuori CM, Singh I, Zhang K, Hoppe N, Pinto AFM, Diedrich JK, Muftuoglu Y, Szkudlinski MW, Saghatelian A, Dror RO, Cheng Y, Manglik A
Nature (2022) 609 pp. 846-853 [ Pubmed: 35940205 DOI: doi:10.1038/s41586-022-05159-1 ]
Faust B, Billesbolle CB, Suomivuori CM, Singh I, Zhang K, Hoppe N, Pinto AFM, Diedrich JK, Muftuoglu Y, Szkudlinski MW, Saghatelian A, Dror RO, Cheng Y, Manglik A
Nature (2022) 609 pp. 846-853 [ Pubmed: 35940205 DOI: doi:10.1038/s41586-022-05159-1 ]
Native human TSH bound to human Thyrotropin receptor (extracellular domain map only)
Faust B, Billesbolle CB, Suomivuori CM, Singh I, Zhang K, Hoppe N, Pinto AFM, Diedrich JK, Muftuoglu Y, Szkudlinski MW, Saghatelian A, Dror RO, Cheng Y, Manglik A
Nature (2022) 609 pp. 846-853 [ Pubmed: 35940205 DOI: doi:10.1038/s41586-022-05159-1 ]