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software:cryoSPARC
Filter By
Current Database
- EMDB [15782]
Current status
- REL [15782]
Sample type
- Complex [14612]
- Protein [11683]
- Ligand [7024]
- RNA [1428]
- DNA [1116]
- Cellular component [717]
- Virus [383]
- Cell [122]
- Other [74]
- Tissue [26]
Organism
- Homo sapiens [6479]
- Synthetic construct [1074]
- Mus musculus [1045]
- Escherichia coli [1033]
- Severe acute respiratory syndrome coronavirus [889]
- Saccharomyces cerevisiae [502]
- Escherichia coli [402]
- Human immunodeficiency virus 1 [343]
- Rattus norvegicus [331]
- Oryctolagus cuniculus [292]
- Bos taurus [278]
- Lama glama [265]
- Sus scrofa [203]
- Xenopus laevis [180]
- Arabidopsis thaliana [173]
- Saccharomyces cerevisiae [167]
- Influenza a virus [136]
- Macaca mulatta [117]
- Mycobacterium tuberculosis [111]
- Geobacillus stearothermophilus [110]
- Mycolicibacterium smegmatis [87]
- Bacillus sp. (strain ps3) [80]
- Drosophila melanogaster [78]
- Escherichia coli [77]
- Aequorea victoria [76]
- Vicugna pacos [73]
- Staphylococcus aureus [67]
- Trypanosoma brucei [66]
- Bacillus subtilis [62]
- Thermus thermophilus [60]
- Pseudomonas aeruginosa [57]
- Plasmodium falciparum [55]
- Chlamydomonas reinhardtii [50]
- Mycobacterium tuberculosis [50]
- Human herpesvirus 1 [47]
- Gallus gallus [46]
- Pseudomonas aeruginosa [45]
- Lassa mammarenavirus [42]
- Trichomonas vaginalis [42]
- Chaetomium thermophilum [38]
- Potato virus y [37]
- Methanothermobacter marburgensis [37]
- Enterobacteria phage t4 [37]
- Enterobacteria phage t4 [36]
- Schizosaccharomyces pombe [36]
- Meiothermus taiwanensis [35]
- Dna molecule [33]
- Caenorhabditis elegans [33]
- Danio rerio [33]
- Simian virus 40 [32]
- Thermotoga maritima [32]
- Macaca fascicularis [32]
- Orthobornavirus bornaense [31]
- Euglena gracilis [31]
- Clostridium perfringens [30]
- Chaetomium thermophilum [30]
- Saccharomyces cerevisiae [30]
- Cricetulus griseus [29]
- Acetivibrio thermocellus [29]
- Aquifex aeolicus [29]
- Salmonella enterica [29]
- Salmonella enterica [28]
- Streptococcus pyogenes [27]
- Mycolicibacterium smegmatis [27]
- Caulobacter vibrioides [26]
- Tetrahymena thermophila [26]
- Ovis aries [26]
- Adeno-associated dependoparvovirus a [25]
- Vibrio cholerae [25]
- Influenza a virus [25]
- Clostridioides difficile [24]
- Listeria innocua [24]
- Plasmodium falciparum [24]
- Brassica oleracea [24]
- Morbillivirus hominis [24]
- Tilapinevirus tilapiae [22]
- Severe acute respiratory syndrome coronavirus [22]
- Macrocystis pyrifera [22]
- Oryza sativa [22]
- Acinetobacter baumannii [22]
- Human herpesvirus 1 [21]
- Thermoanaerobaculum aquaticum [21]
- Clostridium botulinum [20]
- Synechocystis sp. pcc 6803 [19]
- Potyvirus atuberosi [19]
- Streptococcus thermophilus [19]
- Methanosarcina acetivorans [19]
- Bacillus subtilis [19]
- Porcine epidemic diarrhea virus [19]
- Nipah virus [19]
- Azotobacter vinelandii [19]
- (no species) [18]
- Lake sinai virus 2 [18]
- Escherichia coli [18]
- Azotobacter vinelandii [18]
- Vibrio cholerae [18]
- Komagataella phaffii [18]
- Escherichia coli [18]
- Epstein-barr virus (strain gd1) [17]
- Dengue virus [17]
EM Method
- Single-particle [15460]
- Helical reconstruction [319]
- Subtomogram averaging [3]
Resolution
- < 2Å [160]
- ≥ 2Å and < 3Å [4715]
- ≥ 3Å and < 4Å [7699]
- ≥ 4Å and < 5Å [1561]
- ≥ 5Å and < 6Å [406]
- ≥ 6Å and < 8Å [639]
- ≥ 8Å and < 12Å [331]
- ≥ 12Å and < 16Å [84]
- ≥ 16Å and < 20Å [100]
- ≥ 20Å and < 30Å [84]
- ≥ 30Å [3]
Model molecular weight
- 0-50 kDa [103]
- 50-100 kDa [804]
- 100-250 kDa [3592]
- 250-500 kDa [2885]
- 500-1000 kDa [1410]
- 1-2 MDa [489]
- 2-5 MDa [465]
- 5-10 MDa [100]
- > 10 MDa [49]
Release Date
- 2026 [3914]
- 2025 [4100]
- 2024 [2772]
- 2023 [2044]
- 2022 [1221]
- 2021 [870]
- 2020 [554]
- 2019 [190]
- 2018 [95]
- 2017 [22]
Author by name
- Liu Y [458]
- Zhang Y [449]
- Ward AB [343]
- Wang Y [326]
- Wang J [305]
- Gao Y [298]
- Zhang K [297]
- Li Y [276]
- Zhang L [275]
- Zhang Z [255]
- Zhang S [249]
- Li S [242]
- Zhang X [224]
- Hu Y [220]
- Wang H [217]
- Wang X [213]
- Rubinstein JL [204]
- Yang Y [203]
- Lyumkis D [200]
- Kwong PD [197]
- Liu J [197]
- Wang L [196]
- Skiniotis G [195]
- Li H [191]
- Marks AR [189]
- Wang S [188]
- Li Z [186]
- Miotto MC [186]
- Papasergi-scott MM [184]
- Sheng K [180]
- Williamson JR [180]
- Kobilka BK [178]
- Chen Y [177]
- Zhang J [170]
- Liu C [169]
- Panova O [169]
- Zhou ZH [169]
- Gmeiner P [167]
- Kishikawa J [166]
- Seven AB [165]
- Yuan Q [162]
- Dridi H [160]
- Hilger D [160]
- Reiken S [160]
- He F [159]
- Hildebrand PW [159]
- Tchagou C [159]
- Weninger G [159]
- Zhang B [159]
- Zhou J [159]
- Batebi H [157]
- Casiraghi M [157]
- Eskici G [157]
- Maul L [157]
- Perez-hernandez G [157]
- Wu M [156]
- Dong X [153]
- Li J [153]
- Zhou L [152]
- Liu S [150]
- Liu Z [150]
- Mitsuoka K [150]
- Lee J [148]
- Kishikawa JI [147]
- Yokoyama K [146]
- Veesler D [145]
- Klinge S [144]
- Liu B [141]
- Chen Z [140]
- Wronska A [137]
- Chen X [136]
- Shapiro L [135]
- Li X [134]
- Nakano A [134]
- Vanden Broeck A [134]
- Wang Q [133]
- Jiang Y [132]
- Zhang R [127]
- Yu J [126]
- Zhang H [125]
- Liu X [124]
- Park J [124]
- Acharya P [123]
- He Z [123]
- Bjorkman PJ [122]
- Ozorowski G [122]
- Chen J [121]
- Han F [119]
- Yang J [118]
- Baker D [117]
- Park YJ [117]
- Tian H [117]
- Zhao Y [117]
- Xu C [114]
- Nureki O [113]
- Wang Z [113]
- Huang X [112]
- Chen M [111]
- Kato T [111]
- Haynes BF [109]
Author by ORCID
- Lyumkis D [196]
- Skiniotis G [186]
- Ward AB [176]
- Kobilka BK [175]
- Papasergi-scott MM [175]
- Rubinstein JL [171]
- Gmeiner P [164]
- Zhou ZH [160]
- Gao Y [160]
- Panova O [159]
- He F [159]
- Hilger D [158]
- Batebi H [157]
- Perez-hernandez G [157]
- Hildebrand PW [157]
- Kwong PD [153]
- Kishikawa JI [146]
- Klinge S [144]
- Miotto MC [141]
- Vanden Broeck A [134]
- Weninger G [114]
- Park YJ [109]
- Zhou L [108]
- Hu Y [104]
- Wu M [104]
- Yokoyama K [103]
- Zhang K [102]
- Williamson JR [101]
- Chai P [97]
- Hite RK [94]
- Torres JL [92]
- Wronska A [91]
- Zhang R [91]
- Cheng Y [90]
- Steyaert J [90]
- Spahn CMT [88]
- Veesler D [88]
- Baker D [87]
- King NP [87]
- Zhang K [87]
- Sobolevsky AI [86]
- Letts JA [85]
- Huang W [85]
- Karakas E [84]
- Furukawa H [84]
- Brown A [83]
- Lander GC [83]
- Carrique L [82]
- Hallberg BM [82]
- Pardon E [81]
- Zeng J [81]
- Edwards RJ [81]
- Niu Q [79]
- Noteborn WEM [79]
- Aiyer S [78]
- Lee SY [78]
- Gouaux E [78]
- Chang YC [76]
- Sun C [75]
- Stagno J [75]
- Greber BJ [74]
- Dominguez R [74]
- Kanekiyo M [73]
- Mielke T [73]
- Sauer DB [72]
- Dridi H [72]
- Gorman J [72]
- Henderson R [72]
- Marks AR [72]
- Xia X [71]
- Leung MR [71]
- Kato T [71]
- Chiu W [71]
- Borgnia MJ [70]
- Nureki O [70]
- Guo H [69]
- Li H [69]
- Degenhardt MFS [69]
- Wang YX [68]
- Aricescu AR [68]
- Zeev-ben-mordehai T [67]
- Li N [67]
- Yang F [66]
- Yang TJ [66]
- Palmer NJ [66]
- Podobnik M [65]
- Teng F [65]
- Zhou R [65]
- Zhou J [65]
- Tian H [65]
- Yang Y [65]
- Zhang S [65]
- Guo R [65]
- He Z [65]
- Han F [65]
- Im W [64]
- Li S [64]
- Shimogawa MM [63]
- Hill KL [63]
- Langousis G [63]
Journal
- NAT COMMUN [3373]
- TO BE PUBLISHED [2123]
- NATURE [1381]
- BIORXIV [1181]
- NAT STRUCT MOL BIOL [859]
- PNAS [694]
- SCI ADV [685]
- SCIENCE [680]
- MOL CELL [514]
- NUCLEIC ACIDS RES [391]
- CELL [320]
- CELL REP [320]
- STRUCTURE [305]
- ELIFE [283]
- COMMUN BIOL [190]
- NAT CHEM BIOL [185]
- EMBO J [155]
- ACTA CRYSTALLOGR D STRUCT BIOL [135]
- J BIOL CHEM [125]
- PROTEIN SCI [110]
- PLOS PATHOG [98]
- CELL RES [81]
- NAT MICROBIOL [79]
- J MOL BIOL [76]
- IMMUNITY [73]
- J VIROL [68]
- CELL HOST MICROBE [65]
- MBIO [65]
- NAT METHODS [64]
- J STRUCT BIOL [58]
- SCI TRANSL MED [56]
- J CLIN INV [49]
- J AM CHEM SOC [47]
- INT J MOL SCI [44]
- SCI REP [44]
- NAT PLANTS [43]
- CELL DISCOV [41]
- PLOS BIOL [39]
- COMMUN CHEM [38]
- J STRUCT BIOL X [38]
- PNAS NEXUS [38]
- RES SQ [36]
- EBIOMEDICINE [34]
- ISCIENCE [32]
- J MED CHEM [32]
- NEURON [32]
- NPJ VACCINES [32]
- BLOOD [31]
- IUCRJ [27]
- PROTEIN CELL [27]
- ADV SCI [26]
- BIOCHEM BIOPHYS RES COMMUN [24]
- SIGNAL TRANSDUCT TARGET THER [24]
- EMBO REP [23]
- J CELL BIOL [22]
- J.THROMB.HAEMOST. [22]
- NAT CATAL [22]
- BIOCHEMISTRY [21]
- ACTA CRYSTALLOGR F STRUCT BIOL COMMUN [20]
- NAT NANOTECHNOL [20]
- FEBS J [18]
- LIFE SCI ALLIANCE [18]
- ACS NANO [17]
- CELL REP MED [17]
- COMMUN MATER [16]
- GENES DEV [16]
- FUNDAM RES [15]
- SCI IMMUNOL [15]
- J GEN VIROL [14]
- PLANT CELL [14]
- PLOS ONE [14]
- VIRUSES [14]
- BIOMOLECULES [12]
- FEBS LETT [12]
- INT J BIOL MACROMOL [12]
- MOL.BIOL.EVOL. [12]
- NAT IMMUNOL [12]
- ACS CATAL [11]
- NAT NEUROSCI [11]
- VITA [11]
- CURR BIOL [10]
- ACS BIO MED CHEM AU [9]
- BIOPHYS J [9]
- GENET MED [9]
- J EXP MED [9]
- RES COMPUT MOL BIOL [9]
- VIROLOGY [9]
- ANTIVIRAL RES [8]
- CELL CHEM BIOL [8]
- RNA [8]
- ACS CENT SCI [7]
- ACTA PHARM SIN B [7]
- ACTA PHARMACOL.SIN. [7]
- BIOCHEM J [7]
- BMC METHODS [7]
- ENVIRON SCI TECHNOL. [7]
- NAT BIOTECHNOL [7]
- PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES USA [7]
- SMALL [7]
- ANGEW CHEM INT ED ENGL [6]
Software
- CRYOSPARC [15782]
- RELION [2145]
- CTFFIND [668]
- GCTF [243]
- COOT [227]
- UCSF CHIMERAX [177]
- WARP [137]
- CISTEM [85]
- PHENIX [63]
- UCSF CHIMERA [51]
- CRYODRGN [36]
- ISOLDE [32]
- EMAN [16]
- SIMPLE [14]
- CRYOLO [13]
- FREALIGN [10]
- EMREADY [6]
- SCIPION [6]
- EMAN2 [5]
- JSPR [5]
- MOTIONCORR2 [4]
- EPU [3]
- CRYOS [2]
- DEEPEMHANCER [2]
- DYNAMO [2]
- NAMD [2]
- SERIALEM [2]
- XMIPP [2]
- BSOFT [1]
- CRYODRGN2 [1]
- CRYOSPAR [1]
- IHRSR [1]
- MDFF [1]
- MPSA [1]
- RELION2.1 [1]
- ROSETTA [1]
- SPRING [1]
- TOPAZ [1]
Microscope
- TFS KRIOS [6493]
- FEI TITAN KRIOS [6409]
- TFS GLACIOS [922]
- FEI TALOS ARCTICA [912]
- JEOL CRYO ARM 300 [249]
- FEI TECNAI F30 [114]
- FEI POLARA 300 [111]
- FEI TITAN [97]
- TFS TALOS [97]
- TFS TALOS L120C [70]
- FEI TECNAI ARCTICA [62]
- FEI TECNAI F20 [52]
- FEI TECNAI SPIRIT [47]
- JEOL CRYO ARM 200 [36]
- TFS TITAN THEMIS [21]
- FEI TECNAI 20 [19]
- FEI/PHILIPS CM300FEG/T [15]
- FEI TECNAI 12 [13]
- FEI MORGAGNI [11]
- JEOL 3200FSC [8]
- TFS TALOS F200C [8]
- TFS TUNDRA [5]
- FEI TECNAI 10 [4]
- JEOL 2100F [3]
- JEOL 3200FS [3]
- JEOL 2100 [2]
- FEI TECNAI SPHERA [1]
- FEI/PHILIPS CM300FEG/HE [1]
- JEOL 1230 [1]
- JEOL 1400 [1]
- JEOL 2010 [1]
- JEOL 2010F [1]
Electron Source
- FIELD EMISSION GUN [15618]
- LAB6 [132]
- OTHER [32]
Film or detector model
- GATAN K3 6K X 4K [5061]
- GATAN K3 BIOQUANTUM 6K X 4K [4300]
- FEI FALCON IV 4K X 4K [2391]
- GATAN K2 SUMMIT 4K X 4K [1759]
- TFS FALCON 4I 4K X 4K [719]
- FEI FALCON III 4K X 4K [710]
- GATAN K3 BIOCONTINUUM 6K X 4K [320]
- GATAN K2 QUANTUM 4K X 4K [217]
- FEI CETA 4K X 4K [80]
- FEI FALCON II 4K X 4K [48]
- GATAN ULTRASCAN 4000 4K X 4K [46]
- TVIPS TEMCAM-F416 4K X 4K [32]
- OTHER [28]
- FEI FALCON I 4K X 4K [27]
- DIRECT ELECTRON APOLLO 4K X 4K [17]
- GATAN K2 BASE 4K X 4K [16]
- DIRECT ELECTRON DE-10 5K X 4K [7]
- FEI EAGLE 4K X 4K [5]
- DIRECT ELECTRON DE-16 4K X 4K [4]
- DIRECT ELECTRON DE-20 5K X 3K [4]
- DIRECT ELECTRON DE-64 8K X 8K [3]
- DECTRIS ELA 1K X 0.5K [2]
- GATAN ALPINE 2.3K X 3.2K [2]
- TVIPS TEMCAM-F816 8K X 8K [2]
- DECTRIS SINGLA 1K X 1K [1]
- GATAN K2 IS 4K X 4K [1]
- GATAN MULTISCAN [1]
- GATAN ORIUS SC200 2K X 2K [1]
- GATAN ULTRASCAN 1000 2K X 2K [1]
External links
- PDB [15478]
- UniProt [10673]
- PDBe-Kb [9758]
- AlphaFold DB [9683]
- Gene Ontology [7709]
- InterPro [7590]
- Pfam [6938]
- ChEBI [6435]
- ChEMBL [5717]
- DrugBank [5032]
- Complex Portal [3125]
- EMPIAR [2055]
- SCOP2 [72]
- CATH [12]
CryoEM
Release date: July 8, 2026
Resolution: 11.0 Å
EM Method: Single-particle
Resolution: 11.0 Å
EM Method: Single-particle
Chen B, Gao L, Bonninger M, Huang T, Krez N, Wen W, Bowen M, Lou J, Marks JD, Rummel A, Jin R
Nat Commun (2026) 17 [ Pubmed: 42337249 DOI: doi:10.1038/s41467-026-74499-7 ]
CryoEM
Release date: July 8, 2026
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 9n3b
Q-score: 0.419
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 9n3b
Q-score: 0.419
Khare B, Arnaud CA, Klose T, Rossmann MG, Crowe JE, Kuhn RJ
EMBO Rep (2026) [ DOI: doi:10.1038/s44319-026-00851-z ]
CryoEM
Release date: July 8, 2026
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 9h52
Q-score: 0.216
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 9h52
Q-score: 0.216
Singh V, Shiriaev D, Bilalli L, Khawaja A, Rorbach J
Nat Commun (2026) 17 [ Pubmed: 42342677 DOI: doi:10.1038/s41467-026-74700-x ]
CryoEM
Release date: July 8, 2026
Resolution: 6.7 Å
EM Method: Subtomogram averaging
Fitted PDBs: 9rbu
Q-score: 0.118
Resolution: 6.7 Å
EM Method: Subtomogram averaging
Fitted PDBs: 9rbu
Q-score: 0.118
Vazquez-Sarandeses E, Mikirtumov V, Noel J, Kudryashev M, Daumke O
biorxiv.org (2025) [ DOI: doi:10.1101/2025.06.05.658037 ]
CryoEM
Release date: July 8, 2026
Resolution: 10.1 Å
EM Method: Subtomogram averaging
Fitted PDBs: 9rc1
Q-score: 0.075
Resolution: 10.1 Å
EM Method: Subtomogram averaging
Fitted PDBs: 9rc1
Q-score: 0.075
Vazquez-Sarandeses E, Mikirtumov V, Noel J, Kudryashev M, Daumke O
To Be Published
CryoEM
Release date: July 8, 2026
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 9rmk
Q-score: 0.523
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 9rmk
Q-score: 0.523
Harrison PJ, Naismith JH, Clare DK, Quigley A
To Be Published
CryoEM
Release date: July 8, 2026
Resolution: 3.86 Å
EM Method: Single-particle
Fitted PDBs: 9rnj
Q-score: 0.229
Resolution: 3.86 Å
EM Method: Single-particle
Fitted PDBs: 9rnj
Q-score: 0.229
Matsuoka R, Oswald C, Jazayeri A, Duerr KL
To Be Published
CryoEM
Release date: July 8, 2026
Resolution: 2.4 Å
EM Method: Single-particle
Resolution: 2.4 Å
EM Method: Single-particle
Pellegrino S, Drulyte I, Harman M, Bezerra GA
To Be Published
CryoEM
Release date: July 8, 2026
Resolution: 3.07 Å
EM Method: Single-particle
Fitted PDBs: 9rqj
Q-score: 0.529
Resolution: 3.07 Å
EM Method: Single-particle
Fitted PDBs: 9rqj
Q-score: 0.529
Thangaratnarajah C, Ettema TW, Slotboom DJ
To Be Published
CryoEM
Release date: July 8, 2026
Resolution: 2.65 Å
EM Method: Single-particle
Fitted PDBs: 9rql
Q-score: 0.546
Resolution: 2.65 Å
EM Method: Single-particle
Fitted PDBs: 9rql
Q-score: 0.546
Cifuente JO, Povolo L, Halim A, Ubarretxena-Belandia I
To Be Published
Filter By
Current Database
- EMDB [15782]
Current status
- REL [15782]
Sample type
- Complex [14612]
- Protein [11683]
- Ligand [7024]
- RNA [1428]
- DNA [1116]
- Cellular component [717]
- Virus [383]
- Cell [122]
- Other [74]
- Tissue [26]
Organism
- Homo sapiens [6479]
- Synthetic construct [1074]
- Mus musculus [1045]
- Escherichia coli [1033]
- Severe acute respiratory syndrome coronavirus [889]
- Saccharomyces cerevisiae [502]
- Escherichia coli [402]
- Human immunodeficiency virus 1 [343]
- Rattus norvegicus [331]
- Oryctolagus cuniculus [292]
- Bos taurus [278]
- Lama glama [265]
- Sus scrofa [203]
- Xenopus laevis [180]
- Arabidopsis thaliana [173]
- Saccharomyces cerevisiae [167]
- Influenza a virus [136]
- Macaca mulatta [117]
- Mycobacterium tuberculosis [111]
- Geobacillus stearothermophilus [110]
- Mycolicibacterium smegmatis [87]
- Bacillus sp. (strain ps3) [80]
- Drosophila melanogaster [78]
- Escherichia coli [77]
- Aequorea victoria [76]
- Vicugna pacos [73]
- Staphylococcus aureus [67]
- Trypanosoma brucei [66]
- Bacillus subtilis [62]
- Thermus thermophilus [60]
- Pseudomonas aeruginosa [57]
- Plasmodium falciparum [55]
- Chlamydomonas reinhardtii [50]
- Mycobacterium tuberculosis [50]
- Human herpesvirus 1 [47]
- Gallus gallus [46]
- Pseudomonas aeruginosa [45]
- Lassa mammarenavirus [42]
- Trichomonas vaginalis [42]
- Chaetomium thermophilum [38]
- Potato virus y [37]
- Methanothermobacter marburgensis [37]
- Enterobacteria phage t4 [37]
- Enterobacteria phage t4 [36]
- Schizosaccharomyces pombe [36]
- Meiothermus taiwanensis [35]
- Dna molecule [33]
- Caenorhabditis elegans [33]
- Danio rerio [33]
- Simian virus 40 [32]
- Thermotoga maritima [32]
- Macaca fascicularis [32]
- Orthobornavirus bornaense [31]
- Euglena gracilis [31]
- Clostridium perfringens [30]
- Chaetomium thermophilum [30]
- Saccharomyces cerevisiae [30]
- Cricetulus griseus [29]
- Acetivibrio thermocellus [29]
- Aquifex aeolicus [29]
- Salmonella enterica [29]
- Salmonella enterica [28]
- Streptococcus pyogenes [27]
- Mycolicibacterium smegmatis [27]
- Caulobacter vibrioides [26]
- Tetrahymena thermophila [26]
- Ovis aries [26]
- Adeno-associated dependoparvovirus a [25]
- Vibrio cholerae [25]
- Influenza a virus [25]
- Clostridioides difficile [24]
- Listeria innocua [24]
- Plasmodium falciparum [24]
- Brassica oleracea [24]
- Morbillivirus hominis [24]
- Tilapinevirus tilapiae [22]
- Severe acute respiratory syndrome coronavirus [22]
- Macrocystis pyrifera [22]
- Oryza sativa [22]
- Acinetobacter baumannii [22]
- Human herpesvirus 1 [21]
- Thermoanaerobaculum aquaticum [21]
- Clostridium botulinum [20]
- Synechocystis sp. pcc 6803 [19]
- Potyvirus atuberosi [19]
- Streptococcus thermophilus [19]
- Methanosarcina acetivorans [19]
- Bacillus subtilis [19]
- Porcine epidemic diarrhea virus [19]
- Nipah virus [19]
- Azotobacter vinelandii [19]
- (no species) [18]
- Lake sinai virus 2 [18]
- Escherichia coli [18]
- Azotobacter vinelandii [18]
- Vibrio cholerae [18]
- Komagataella phaffii [18]
- Escherichia coli [18]
- Epstein-barr virus (strain gd1) [17]
- Dengue virus [17]
EM Method
- Single-particle [15460]
- Helical reconstruction [319]
- Subtomogram averaging [3]
Resolution
- < 2Å [160]
- ≥ 2Å and < 3Å [4715]
- ≥ 3Å and < 4Å [7699]
- ≥ 4Å and < 5Å [1561]
- ≥ 5Å and < 6Å [406]
- ≥ 6Å and < 8Å [639]
- ≥ 8Å and < 12Å [331]
- ≥ 12Å and < 16Å [84]
- ≥ 16Å and < 20Å [100]
- ≥ 20Å and < 30Å [84]
- ≥ 30Å [3]
Model molecular weight
- 0-50 kDa [103]
- 50-100 kDa [804]
- 100-250 kDa [3592]
- 250-500 kDa [2885]
- 500-1000 kDa [1410]
- 1-2 MDa [489]
- 2-5 MDa [465]
- 5-10 MDa [100]
- > 10 MDa [49]
Release Date
- 2026 [3914]
- 2025 [4100]
- 2024 [2772]
- 2023 [2044]
- 2022 [1221]
- 2021 [870]
- 2020 [554]
- 2019 [190]
- 2018 [95]
- 2017 [22]
Author by name
- Liu Y [458]
- Zhang Y [449]
- Ward AB [343]
- Wang Y [326]
- Wang J [305]
- Gao Y [298]
- Zhang K [297]
- Li Y [276]
- Zhang L [275]
- Zhang Z [255]
- Zhang S [249]
- Li S [242]
- Zhang X [224]
- Hu Y [220]
- Wang H [217]
- Wang X [213]
- Rubinstein JL [204]
- Yang Y [203]
- Lyumkis D [200]
- Kwong PD [197]
- Liu J [197]
- Wang L [196]
- Skiniotis G [195]
- Li H [191]
- Marks AR [189]
- Wang S [188]
- Li Z [186]
- Miotto MC [186]
- Papasergi-scott MM [184]
- Sheng K [180]
- Williamson JR [180]
- Kobilka BK [178]
- Chen Y [177]
- Zhang J [170]
- Liu C [169]
- Panova O [169]
- Zhou ZH [169]
- Gmeiner P [167]
- Kishikawa J [166]
- Seven AB [165]
- Yuan Q [162]
- Dridi H [160]
- Hilger D [160]
- Reiken S [160]
- He F [159]
- Hildebrand PW [159]
- Tchagou C [159]
- Weninger G [159]
- Zhang B [159]
- Zhou J [159]
- Batebi H [157]
- Casiraghi M [157]
- Eskici G [157]
- Maul L [157]
- Perez-hernandez G [157]
- Wu M [156]
- Dong X [153]
- Li J [153]
- Zhou L [152]
- Liu S [150]
- Liu Z [150]
- Mitsuoka K [150]
- Lee J [148]
- Kishikawa JI [147]
- Yokoyama K [146]
- Veesler D [145]
- Klinge S [144]
- Liu B [141]
- Chen Z [140]
- Wronska A [137]
- Chen X [136]
- Shapiro L [135]
- Li X [134]
- Nakano A [134]
- Vanden Broeck A [134]
- Wang Q [133]
- Jiang Y [132]
- Zhang R [127]
- Yu J [126]
- Zhang H [125]
- Liu X [124]
- Park J [124]
- Acharya P [123]
- He Z [123]
- Bjorkman PJ [122]
- Ozorowski G [122]
- Chen J [121]
- Han F [119]
- Yang J [118]
- Baker D [117]
- Park YJ [117]
- Tian H [117]
- Zhao Y [117]
- Xu C [114]
- Nureki O [113]
- Wang Z [113]
- Huang X [112]
- Chen M [111]
- Kato T [111]
- Haynes BF [109]
Author by ORCID
- Lyumkis D [196]
- Skiniotis G [186]
- Ward AB [176]
- Kobilka BK [175]
- Papasergi-scott MM [175]
- Rubinstein JL [171]
- Gmeiner P [164]
- Zhou ZH [160]
- Gao Y [160]
- Panova O [159]
- He F [159]
- Hilger D [158]
- Batebi H [157]
- Perez-hernandez G [157]
- Hildebrand PW [157]
- Kwong PD [153]
- Kishikawa JI [146]
- Klinge S [144]
- Miotto MC [141]
- Vanden Broeck A [134]
- Weninger G [114]
- Park YJ [109]
- Zhou L [108]
- Hu Y [104]
- Wu M [104]
- Yokoyama K [103]
- Zhang K [102]
- Williamson JR [101]
- Chai P [97]
- Hite RK [94]
- Torres JL [92]
- Wronska A [91]
- Zhang R [91]
- Cheng Y [90]
- Steyaert J [90]
- Spahn CMT [88]
- Veesler D [88]
- Baker D [87]
- King NP [87]
- Zhang K [87]
- Sobolevsky AI [86]
- Letts JA [85]
- Huang W [85]
- Karakas E [84]
- Furukawa H [84]
- Brown A [83]
- Lander GC [83]
- Carrique L [82]
- Hallberg BM [82]
- Pardon E [81]
- Zeng J [81]
- Edwards RJ [81]
- Niu Q [79]
- Noteborn WEM [79]
- Aiyer S [78]
- Lee SY [78]
- Gouaux E [78]
- Chang YC [76]
- Sun C [75]
- Stagno J [75]
- Greber BJ [74]
- Dominguez R [74]
- Kanekiyo M [73]
- Mielke T [73]
- Sauer DB [72]
- Dridi H [72]
- Gorman J [72]
- Henderson R [72]
- Marks AR [72]
- Xia X [71]
- Leung MR [71]
- Kato T [71]
- Chiu W [71]
- Borgnia MJ [70]
- Nureki O [70]
- Guo H [69]
- Li H [69]
- Degenhardt MFS [69]
- Wang YX [68]
- Aricescu AR [68]
- Zeev-ben-mordehai T [67]
- Li N [67]
- Yang F [66]
- Yang TJ [66]
- Palmer NJ [66]
- Podobnik M [65]
- Teng F [65]
- Zhou R [65]
- Zhou J [65]
- Tian H [65]
- Yang Y [65]
- Zhang S [65]
- Guo R [65]
- He Z [65]
- Han F [65]
- Im W [64]
- Li S [64]
- Shimogawa MM [63]
- Hill KL [63]
- Langousis G [63]
Journal
- NAT COMMUN [3373]
- TO BE PUBLISHED [2123]
- NATURE [1381]
- BIORXIV [1181]
- NAT STRUCT MOL BIOL [859]
- PNAS [694]
- SCI ADV [685]
- SCIENCE [680]
- MOL CELL [514]
- NUCLEIC ACIDS RES [391]
- CELL [320]
- CELL REP [320]
- STRUCTURE [305]
- ELIFE [283]
- COMMUN BIOL [190]
- NAT CHEM BIOL [185]
- EMBO J [155]
- ACTA CRYSTALLOGR D STRUCT BIOL [135]
- J BIOL CHEM [125]
- PROTEIN SCI [110]
- PLOS PATHOG [98]
- CELL RES [81]
- NAT MICROBIOL [79]
- J MOL BIOL [76]
- IMMUNITY [73]
- J VIROL [68]
- CELL HOST MICROBE [65]
- MBIO [65]
- NAT METHODS [64]
- J STRUCT BIOL [58]
- SCI TRANSL MED [56]
- J CLIN INV [49]
- J AM CHEM SOC [47]
- INT J MOL SCI [44]
- SCI REP [44]
- NAT PLANTS [43]
- CELL DISCOV [41]
- PLOS BIOL [39]
- COMMUN CHEM [38]
- J STRUCT BIOL X [38]
- PNAS NEXUS [38]
- RES SQ [36]
- EBIOMEDICINE [34]
- ISCIENCE [32]
- J MED CHEM [32]
- NEURON [32]
- NPJ VACCINES [32]
- BLOOD [31]
- IUCRJ [27]
- PROTEIN CELL [27]
- ADV SCI [26]
- BIOCHEM BIOPHYS RES COMMUN [24]
- SIGNAL TRANSDUCT TARGET THER [24]
- EMBO REP [23]
- J CELL BIOL [22]
- J.THROMB.HAEMOST. [22]
- NAT CATAL [22]
- BIOCHEMISTRY [21]
- ACTA CRYSTALLOGR F STRUCT BIOL COMMUN [20]
- NAT NANOTECHNOL [20]
- FEBS J [18]
- LIFE SCI ALLIANCE [18]
- ACS NANO [17]
- CELL REP MED [17]
- COMMUN MATER [16]
- GENES DEV [16]
- FUNDAM RES [15]
- SCI IMMUNOL [15]
- J GEN VIROL [14]
- PLANT CELL [14]
- PLOS ONE [14]
- VIRUSES [14]
- BIOMOLECULES [12]
- FEBS LETT [12]
- INT J BIOL MACROMOL [12]
- MOL.BIOL.EVOL. [12]
- NAT IMMUNOL [12]
- ACS CATAL [11]
- NAT NEUROSCI [11]
- VITA [11]
- CURR BIOL [10]
- ACS BIO MED CHEM AU [9]
- BIOPHYS J [9]
- GENET MED [9]
- J EXP MED [9]
- RES COMPUT MOL BIOL [9]
- VIROLOGY [9]
- ANTIVIRAL RES [8]
- CELL CHEM BIOL [8]
- RNA [8]
- ACS CENT SCI [7]
- ACTA PHARM SIN B [7]
- ACTA PHARMACOL.SIN. [7]
- BIOCHEM J [7]
- BMC METHODS [7]
- ENVIRON SCI TECHNOL. [7]
- NAT BIOTECHNOL [7]
- PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES USA [7]
- SMALL [7]
- ANGEW CHEM INT ED ENGL [6]
Software
- CRYOSPARC [15782]
- RELION [2145]
- CTFFIND [668]
- GCTF [243]
- COOT [227]
- UCSF CHIMERAX [177]
- WARP [137]
- CISTEM [85]
- PHENIX [63]
- UCSF CHIMERA [51]
- CRYODRGN [36]
- ISOLDE [32]
- EMAN [16]
- SIMPLE [14]
- CRYOLO [13]
- FREALIGN [10]
- EMREADY [6]
- SCIPION [6]
- EMAN2 [5]
- JSPR [5]
- MOTIONCORR2 [4]
- EPU [3]
- CRYOS [2]
- DEEPEMHANCER [2]
- DYNAMO [2]
- NAMD [2]
- SERIALEM [2]
- XMIPP [2]
- BSOFT [1]
- CRYODRGN2 [1]
- CRYOSPAR [1]
- IHRSR [1]
- MDFF [1]
- MPSA [1]
- RELION2.1 [1]
- ROSETTA [1]
- SPRING [1]
- TOPAZ [1]
Microscope
- TFS KRIOS [6493]
- FEI TITAN KRIOS [6409]
- TFS GLACIOS [922]
- FEI TALOS ARCTICA [912]
- JEOL CRYO ARM 300 [249]
- FEI TECNAI F30 [114]
- FEI POLARA 300 [111]
- FEI TITAN [97]
- TFS TALOS [97]
- TFS TALOS L120C [70]
- FEI TECNAI ARCTICA [62]
- FEI TECNAI F20 [52]
- FEI TECNAI SPIRIT [47]
- JEOL CRYO ARM 200 [36]
- TFS TITAN THEMIS [21]
- FEI TECNAI 20 [19]
- FEI/PHILIPS CM300FEG/T [15]
- FEI TECNAI 12 [13]
- FEI MORGAGNI [11]
- JEOL 3200FSC [8]
- TFS TALOS F200C [8]
- TFS TUNDRA [5]
- FEI TECNAI 10 [4]
- JEOL 2100F [3]
- JEOL 3200FS [3]
- JEOL 2100 [2]
- FEI TECNAI SPHERA [1]
- FEI/PHILIPS CM300FEG/HE [1]
- JEOL 1230 [1]
- JEOL 1400 [1]
- JEOL 2010 [1]
- JEOL 2010F [1]
Electron Source
- FIELD EMISSION GUN [15618]
- LAB6 [132]
- OTHER [32]
Film or detector model
- GATAN K3 6K X 4K [5061]
- GATAN K3 BIOQUANTUM 6K X 4K [4300]
- FEI FALCON IV 4K X 4K [2391]
- GATAN K2 SUMMIT 4K X 4K [1759]
- TFS FALCON 4I 4K X 4K [719]
- FEI FALCON III 4K X 4K [710]
- GATAN K3 BIOCONTINUUM 6K X 4K [320]
- GATAN K2 QUANTUM 4K X 4K [217]
- FEI CETA 4K X 4K [80]
- FEI FALCON II 4K X 4K [48]
- GATAN ULTRASCAN 4000 4K X 4K [46]
- TVIPS TEMCAM-F416 4K X 4K [32]
- OTHER [28]
- FEI FALCON I 4K X 4K [27]
- DIRECT ELECTRON APOLLO 4K X 4K [17]
- GATAN K2 BASE 4K X 4K [16]
- DIRECT ELECTRON DE-10 5K X 4K [7]
- FEI EAGLE 4K X 4K [5]
- DIRECT ELECTRON DE-16 4K X 4K [4]
- DIRECT ELECTRON DE-20 5K X 3K [4]
- DIRECT ELECTRON DE-64 8K X 8K [3]
- DECTRIS ELA 1K X 0.5K [2]
- GATAN ALPINE 2.3K X 3.2K [2]
- TVIPS TEMCAM-F816 8K X 8K [2]
- DECTRIS SINGLA 1K X 1K [1]
- GATAN K2 IS 4K X 4K [1]
- GATAN MULTISCAN [1]
- GATAN ORIUS SC200 2K X 2K [1]
- GATAN ULTRASCAN 1000 2K X 2K [1]
External links
- PDB [15478]
- UniProt [10673]
- PDBe-Kb [9758]
- AlphaFold DB [9683]
- Gene Ontology [7709]
- InterPro [7590]
- Pfam [6938]
- ChEBI [6435]
- ChEMBL [5717]
- DrugBank [5032]
- Complex Portal [3125]
- EMPIAR [2055]
- SCOP2 [72]
- CATH [12]