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grant_code:"RP170644"

Filter By

Current Database

  • EMDB [20]

Current status

  • REL [20]

Sample type

  • Protein [17]
  • Complex [16]
  • Ligand [12]
  • Cellular component [3]
  • RNA [1]
  • Tissue [1]

Organism

  • Homo sapiens [12]
  • Mus musculus [4]
  • Gallus gallus [4]
  • Salpingoeca rosetta (strain atcc 50818 / bsb-021) [3]
  • Saccharomyces cerevisiae [2]
  • Ectromelia virus [1]
  • Ectromelia virus [1]
  • Severe acute respiratory syndrome coronavirus [1]
  • Xenopus laevis [1]

EM Method

  • Single-particle [15]
  • Tomography [3]
  • Helical reconstruction [2]

Resolution

  • ≥ 2Å and < 3Å [3]
  • ≥ 3Å and < 4Å [10]
  • ≥ 4Å and < 5Å [3]
  • ≥ 6Å and < 8Å [1]
  • ≥ 20Å and < 30Å [2]

Model molecular weight

  • 50-100 kDa [2]
  • 100-250 kDa [6]
  • 250-500 kDa [1]
  • 500-1000 kDa [3]
  • 1-2 MDa [2]
  • 2-5 MDa [1]

Release Date

  • 2024 [2]
  • 2023 [1]
  • 2022 [12]
  • 2021 [4]
  • 2020 [1]

Author by name

  • Li Y [8]
  • Bai XC [6]
  • Gao H [5]
  • Ji Z [5]
  • Li F [5]
  • Shi Z [5]
  • Yu H [5]
  • Brown MS [4]
  • Clark LD [4]
  • Goldstein JL [4]
  • Kober DL [4]
  • Radhakrishnan A [4]
  • Rosenbaum DM [4]
  • Chen Z [3]
  • Nicastro D [3]
  • Pinskey JM [3]
  • Bai X-C [2]
  • Bernardes NE [2]
  • Chook YM [2]
  • Fung HYJ [2]
  • Shang G [2]
  • Zhang X [2]
  • Afrin S [1]
  • Balana AT [1]
  • Balana JA [1]
  • Chen H [1]
  • Cruz VE [1]
  • Diamond MI [1]
  • Eitson JL [1]
  • Erzberger JP [1]
  • Guiot MC [1]
  • Hard ER [1]
  • Henzler-wildman K [1]
  • Hernandez G [1]
  • Hopewell R [1]
  • Horvath M [1]
  • Jasiqi Y [1]
  • Javed A [1]
  • Kunach P [1]
  • Kuo Y-C [1]
  • Kuo YC [1]
  • Lashuel HA [1]
  • Lee VM [1]
  • Li J [1]
  • Lu D [1]
  • Lu Y [1]
  • Luk KC [1]
  • Mahul-mellier AL [1]
  • Majumdar A [1]
  • Massarweh G [1]
  • Mendell JT [1]
  • Monistrol J [1]
  • Moquin L [1]
  • Nguyen AB [1]
  • Nguyen BA [1]
  • Osinski A [1]
  • Park GJ [1]
  • Pawlowski K [1]
  • Pedretti R [1]
  • Pratt MR [1]
  • Pratt RM [1]
  • Rahmouni N [1]
  • Rosa-neto P [1]
  • Saelices L [1]
  • Schoggins JW [1]
  • Shahmoradian SH [1]
  • Shoichet BK [1]
  • Singh P [1]
  • Singh V [1]
  • Smith MS [1]
  • Soucy JP [1]
  • Tagliabracci VS [1]
  • Therriault J [1]
  • Tian H [1]
  • Tissot C [1]
  • Tonelli M [1]
  • Uchikawa E [1]
  • Vaquer-alicea J [1]
  • Zhang H [1]
  • Zhu X [1]

Author by ORCID

  • Bai XC [6]
  • Gao H [5]
  • Ji Z [5]
  • Yu H [5]
  • Shi Z [5]
  • Kober DL [4]
  • Radhakrishnan A [4]
  • Fung HYJ [2]
  • Zhang X [2]
  • Bernardes NE [2]
  • Cruz VE [1]
  • Pinskey JM [1]
  • Nguyen BA [1]
  • Kunach P [1]
  • Lashuel HA [1]
  • Vaquer-alicea J [1]
  • Mendell JT [1]
  • Rosa-neto P [1]
  • Zhang H [1]
  • Shahmoradian SH [1]
  • Nicastro D [1]
  • Erzberger JP [1]
  • Li J [1]
  • Saelices L [1]
  • Park GJ [1]
  • Majumdar A [1]
  • Lu Y [1]
  • Monistrol J [1]
  • Henzler-wildman K [1]
  • Pawlowski K [1]
  • Shoichet BK [1]
  • Singh V [1]
  • Therriault J [1]
  • Schoggins JW [1]
  • Diamond MI [1]
  • Tagliabracci VS [1]
  • Osinski A [1]
  • Uchikawa E [1]
  • Horvath M [1]
  • Singh P [1]
  • Tissot C [1]
  • Pratt MR [1]
  • Hernandez G [1]
  • Zhu X [1]

Journal

  • CELL DISCOV [5]
  • CELL [4]
  • ELIFE [3]
  • NAT COMMUN [2]
  • NATURE [2]
  • PNAS [2]
  • BIORXIV [1]
  • NAT CHEM BIOL [1]
  • RES SQ [1]
  • SCIENCE [1]

Software

  • RELION [12]
  • CRYOSPARC [1]

Microscope

  • FEI TITAN KRIOS [19]
  • TFS KRIOS [1]

Electron Source

  • FIELD EMISSION GUN [20]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [11]
  • GATAN K2 SUMMIT 4K X 4K [5]
  • GATAN K3 6K X 4K [3]
  • FEI FALCON IV 4K X 4K [1]

External links

  • InterPro [15]
  • PDB [15]
  • PDBe-Kb [15]
  • Pfam [15]
  • UniProt [15]
  • Gene Ontology [14]
  • AlphaFold DB [12]
  • ChEBI [11]
  • ChEMBL [11]
  • Complex Portal [9]
  • DrugBank [8]
Sort by: Download
Showing 1 - 10 of 20. Page 1 of 2
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EMD-45170
Download Map
3D View
Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.
Release date: Dec. 4, 2024
Resolution: 2.0 Å
EM Method: Single-particle
Fitted PDBs: 9c3h
Q-score: 0.684

Zhu X, Cruz VE, Zhang H, Erzberger JP, Mendell JT

Science (2024) 386 pp. eadq8587-eadq8587 [ Pubmed: 39571015 DOI: doi:10.1126/science.adq8587 ]

EMD-42463
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3D View
Alzheimer s disease PHF complexed with PET ligand MK-6240
Release date: Sept. 4, 2024
Resolution: 2.31 Å
EM Method: Helical reconstruction
Fitted PDBs: 8uq7

Kunach P, Vaquer-Alicea J, Smith MS, Monistrol J, Hopewell R, Moquin L, Therriault J, Tissot C, Rahmouni N, Massarweh G, Soucy JP, Guiot MC, Shoichet BK, Rosa-Neto P, Diamond MI, Shahmoradian SH

Nat Commun (2024) 15 pp. 8497-8497 [ DOI: doi:10.1038/s41467-024-52265-x Pubmed: 39353896 ]

EMD-29980
Download Map
3D View
Cryo-EM structure of serine 87 O-GlcNAc-modified alpha-synuclein fibrils
Release date: Nov. 8, 2023
Resolution: 4.8 Å
EM Method: Helical reconstruction
Fitted PDBs: 8gf7
Q-score: 0.356

Balana AT, Mahul-Mellier AL, Nguyen BA, Horvath M, Javed A, Hard ER, Jasiqi Y, Singh P, Afrin S, Pedretti R, Singh V, Lee VM, Luk KC, Saelices L, Lashuel HA, Pratt MR

Nat Chem Biol (2024) 20 pp. 646-655 [ Pubmed: 38347213 DOI: doi:10.1038/s41589-024-01551-2 ]

EMD-26204
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3D View
Ciliary 96-nm repeat unit from Salpingoeca rosetta choanoflagellate , generated via cryo-electron tomography and subtomogram averaging
Release date: Nov. 23, 2022
Resolution: 22.0 Å
EM Method: Tomography

Pinskey JM, Nicastro D

eLife (2022) [ ]

EMD-26209
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3D View
Subtomogram average of central pair complex from Salpingoeca rosetta choanoflagellate
Release date: Nov. 23, 2022
Resolution: 25.0 Å
EM Method: Tomography

Pinskey JM, Nicastro D

eLife (2022) [ ]

EMD-26210
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3D View
Barb-like structure on the external surface of the Salpingoeca rosetta choanoflagellate ciliary membrane
Release date: Nov. 23, 2022
EM Method: Tomography

Pinskey JM, Nicastro D

eLife (2022) [ ]

EMD-26625
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3D View
Structure of Importin-4 bound to the H3-H4-ASF1 histone-histone chaperone complex
Release date: Sept. 21, 2022
Resolution: 3.45 Å
EM Method: Single-particle
Fitted PDBs: 7unk
Q-score: 0.43

Bernardes NE, Fung HYJ, Li Y, Chen Z, Chook YM

PNAS (2022) 119 pp. e2207177119-e2207177119 [ DOI: doi:10.1073/pnas.2207177119 Pubmed: 36103578 ]

EMD-27780
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3D View
Cryo-EM structure of Importin-4 bound to RanGTP
Release date: Sept. 21, 2022
Resolution: 7.1 Å
EM Method: Single-particle
Fitted PDBs: 8dyo
Q-score: 0.206

Bernardes NE, Fung HYJ, Li Y, Chen Z, Chook YM

PNAS (2022) 119 pp. e2207177119-e2207177119 [ DOI: doi:10.1073/pnas.2207177119 Pubmed: 36103578 ]

EMD-25898
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3D View
SARS-CoV-2 nsp12/7/8 complex with a native N-terminus nsp9
Release date: March 16, 2022
Resolution: 3.18 Å
EM Method: Single-particle
Fitted PDBs: 7thm
Q-score: 0.486

Park GJ, Osinski A, Hernandez G, Eitson JL, Majumdar A, Tonelli M, Henzler-Wildman K, Pawlowski K, Chen Z, Li Y, Schoggins JW, Tagliabracci VS

Nature (2022) 609 pp. 793-800 [ DOI: doi:10.1038/s41586-022-05185-z Pubmed: 35944563 ]

EMD-31894
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3D View
Human p97 double hexamer conformer II with ATPgammaS bound
Release date: March 2, 2022
Resolution: 3.32 Å
EM Method: Single-particle
Fitted PDBs: 7vcs
Q-score: 0.401

Gao H, Li F, Ji Z, Shi Z, Li Y, Yu H

Cell Discov (2022) 8 pp. 19-19 [ DOI: doi:10.1038/s41421-022-00379-1 Pubmed: 35190543 ]

Sort by: Download
Showing 1 - 10 of 20. Page 1 of 2
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [20]

Current status

  • REL [20]

Sample type

  • Protein [17]
  • Complex [16]
  • Ligand [12]
  • Cellular component [3]
  • RNA [1]
  • Tissue [1]

Organism

  • Homo sapiens [12]
  • Mus musculus [4]
  • Gallus gallus [4]
  • Salpingoeca rosetta (strain atcc 50818 / bsb-021) [3]
  • Saccharomyces cerevisiae [2]
  • Ectromelia virus [1]
  • Ectromelia virus [1]
  • Severe acute respiratory syndrome coronavirus [1]
  • Xenopus laevis [1]

EM Method

  • Single-particle [15]
  • Tomography [3]
  • Helical reconstruction [2]

Resolution

  • ≥ 2Å and < 3Å [3]
  • ≥ 3Å and < 4Å [10]
  • ≥ 4Å and < 5Å [3]
  • ≥ 6Å and < 8Å [1]
  • ≥ 20Å and < 30Å [2]

Model molecular weight

  • 50-100 kDa [2]
  • 100-250 kDa [6]
  • 250-500 kDa [1]
  • 500-1000 kDa [3]
  • 1-2 MDa [2]
  • 2-5 MDa [1]

Release Date

  • 2024 [2]
  • 2023 [1]
  • 2022 [12]
  • 2021 [4]
  • 2020 [1]

Author by name

  • Li Y [8]
  • Bai XC [6]
  • Gao H [5]
  • Ji Z [5]
  • Li F [5]
  • Shi Z [5]
  • Yu H [5]
  • Brown MS [4]
  • Clark LD [4]
  • Goldstein JL [4]
  • Kober DL [4]
  • Radhakrishnan A [4]
  • Rosenbaum DM [4]
  • Chen Z [3]
  • Nicastro D [3]
  • Pinskey JM [3]
  • Bai X-C [2]
  • Bernardes NE [2]
  • Chook YM [2]
  • Fung HYJ [2]
  • Shang G [2]
  • Zhang X [2]
  • Afrin S [1]
  • Balana AT [1]
  • Balana JA [1]
  • Chen H [1]
  • Cruz VE [1]
  • Diamond MI [1]
  • Eitson JL [1]
  • Erzberger JP [1]
  • Guiot MC [1]
  • Hard ER [1]
  • Henzler-wildman K [1]
  • Hernandez G [1]
  • Hopewell R [1]
  • Horvath M [1]
  • Jasiqi Y [1]
  • Javed A [1]
  • Kunach P [1]
  • Kuo Y-C [1]
  • Kuo YC [1]
  • Lashuel HA [1]
  • Lee VM [1]
  • Li J [1]
  • Lu D [1]
  • Lu Y [1]
  • Luk KC [1]
  • Mahul-mellier AL [1]
  • Majumdar A [1]
  • Massarweh G [1]
  • Mendell JT [1]
  • Monistrol J [1]
  • Moquin L [1]
  • Nguyen AB [1]
  • Nguyen BA [1]
  • Osinski A [1]
  • Park GJ [1]
  • Pawlowski K [1]
  • Pedretti R [1]
  • Pratt MR [1]
  • Pratt RM [1]
  • Rahmouni N [1]
  • Rosa-neto P [1]
  • Saelices L [1]
  • Schoggins JW [1]
  • Shahmoradian SH [1]
  • Shoichet BK [1]
  • Singh P [1]
  • Singh V [1]
  • Smith MS [1]
  • Soucy JP [1]
  • Tagliabracci VS [1]
  • Therriault J [1]
  • Tian H [1]
  • Tissot C [1]
  • Tonelli M [1]
  • Uchikawa E [1]
  • Vaquer-alicea J [1]
  • Zhang H [1]
  • Zhu X [1]

Author by ORCID

  • Bai XC [6]
  • Gao H [5]
  • Ji Z [5]
  • Yu H [5]
  • Shi Z [5]
  • Kober DL [4]
  • Radhakrishnan A [4]
  • Fung HYJ [2]
  • Zhang X [2]
  • Bernardes NE [2]
  • Cruz VE [1]
  • Pinskey JM [1]
  • Nguyen BA [1]
  • Kunach P [1]
  • Lashuel HA [1]
  • Vaquer-alicea J [1]
  • Mendell JT [1]
  • Rosa-neto P [1]
  • Zhang H [1]
  • Shahmoradian SH [1]
  • Nicastro D [1]
  • Erzberger JP [1]
  • Li J [1]
  • Saelices L [1]
  • Park GJ [1]
  • Majumdar A [1]
  • Lu Y [1]
  • Monistrol J [1]
  • Henzler-wildman K [1]
  • Pawlowski K [1]
  • Shoichet BK [1]
  • Singh V [1]
  • Therriault J [1]
  • Schoggins JW [1]
  • Diamond MI [1]
  • Tagliabracci VS [1]
  • Osinski A [1]
  • Uchikawa E [1]
  • Horvath M [1]
  • Singh P [1]
  • Tissot C [1]
  • Pratt MR [1]
  • Hernandez G [1]
  • Zhu X [1]

Journal

  • CELL DISCOV [5]
  • CELL [4]
  • ELIFE [3]
  • NAT COMMUN [2]
  • NATURE [2]
  • PNAS [2]
  • BIORXIV [1]
  • NAT CHEM BIOL [1]
  • RES SQ [1]
  • SCIENCE [1]

Software

  • RELION [12]
  • CRYOSPARC [1]

Microscope

  • FEI TITAN KRIOS [19]
  • TFS KRIOS [1]

Electron Source

  • FIELD EMISSION GUN [20]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [11]
  • GATAN K2 SUMMIT 4K X 4K [5]
  • GATAN K3 6K X 4K [3]
  • FEI FALCON IV 4K X 4K [1]

External links

  • InterPro [15]
  • PDB [15]
  • PDBe-Kb [15]
  • Pfam [15]
  • UniProt [15]
  • Gene Ontology [14]
  • AlphaFold DB [12]
  • ChEBI [11]
  • ChEMBL [11]
  • Complex Portal [9]
  • DrugBank [8]