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grant_code:"Intramural"

Filter By

Current Database

  • EMDB [15]

Current status

  • REL [15]

Sample type

  • Complex [15]
  • Protein [15]
  • Ligand [6]

Organism

  • Homo sapiens [10]
  • Severe acute respiratory syndrome coronavirus [8]
  • Synthetic construct [3]
  • Salmonella enterica [2]
  • Mus musculus [1]
  • Rattus norvegicus [1]
  • Human immunodeficiency virus 1 [1]
  • Sus scrofa [1]

EM Method

  • Single-particle [15]

Resolution

  • ≥ 2Å and < 3Å [2]
  • ≥ 3Å and < 4Å [11]
  • ≥ 4Å and < 5Å [1]
  • ≥ 5Å and < 6Å [1]

Model molecular weight

  • 50-100 kDa [6]
  • 100-250 kDa [3]
  • 250-500 kDa [2]
  • 500-1000 kDa [3]
  • 2-5 MDa [1]

Release Date

  • 2026 [4]
  • 2024 [2]
  • 2023 [1]
  • 2022 [6]
  • 2021 [2]

Author by name

  • Graham BS [8]
  • Kwong PD [8]
  • Leung K [8]
  • Liu T [8]
  • Mascola JR [8]
  • Misasi J [8]
  • Olia AS [8]
  • Pegu A [8]
  • Shi W [8]
  • Stephens T [8]
  • Sullivan NJ [8]
  • Talana CA [8]
  • Teng IT [8]
  • Tsybovsky Y [8]
  • Wang L [8]
  • Yang ES [8]
  • Zhang B [8]
  • Zhang Y [8]
  • Zhou T [8]
  • Choe M [7]
  • Chen M [5]
  • Creanga A [5]
  • Harris DR [5]
  • Jenkins C [5]
  • Stancofski ED [5]
  • Tsybovsky T [5]
  • Ahmad J [4]
  • Boyd LF [4]
  • Chempati S [4]
  • Huang R [4]
  • Huang RK [4]
  • Jiang J [4]
  • Lang ZC [4]
  • Lei H [4]
  • Margulies DH [4]
  • Meier-schellersheim M [4]
  • Morton AJ [4]
  • Natarajan K [4]
  • Panda AK [4]
  • Sgourakis N [4]
  • Sharma S [4]
  • Shevach EM [4]
  • Sun Y [4]
  • Towler RR [4]
  • Abiona OM [3]
  • Baric RS [3]
  • Cale EM [3]
  • Chang LA [3]
  • Corbett KS [3]
  • Darko S [3]
  • Dipiazza AT [3]
  • Doria-rose NA [3]
  • Douek DC [3]
  • Gaudinski MR [3]
  • Gordon IJ [3]
  • Hatcher C [3]
  • Ledgerwood JE [3]
  • Martinez DR [3]
  • Mason RD [3]
  • Mcdermott AB [3]
  • Narpala SR [3]
  • Novik L [3]
  • Phung E [3]
  • Roederer M [3]
  • Ruckwardt TJ [3]
  • Schramm CA [3]
  • Stringham CD [3]
  • Widge AT [3]
  • Antia A [2]
  • Caesar JJE [2]
  • Chevance FFV [2]
  • Davis RL [2]
  • Deme JC [2]
  • Furlong EJ [2]
  • Hait SH [2]
  • Henry AR [2]
  • Hermanus T [2]
  • Hughes KT [2]
  • Johnson S [2]
  • Kgagudi P [2]
  • Laboune F [2]
  • Lea SM [2]
  • Moore PL [2]
  • Nazzari AF [2]
  • O Connell S [2]
  • O Dell S [2]
  • Oloniniyi OK [2]
  • Schmidt SD [2]
  • Wagner DA [2]
  • Eren E [1]
  • Nazzari A [1]
  • Oloninyi OK [1]
  • Palmer I [1]
  • Randazzo D [1]
  • Ransier A [1]
  • Sackett DL [1]
  • Wagner D [1]
  • Watts NR [1]
  • Wingfield PT [1]

Author by ORCID

  • Misasi J [7]
  • Graham BS [7]
  • Zhang B [7]
  • Talana CA [7]
  • Zhou T [7]
  • Zhang Y [7]
  • Wang L [7]
  • Leung K [7]
  • Olia AS [7]
  • Yang ES [7]
  • Pegu A [7]
  • Mascola JR [5]
  • Tsybovsky Y [5]
  • Kwong PD [5]
  • Creanga A [5]
  • Jenkins C [5]
  • Harris DR [5]
  • Teng IT [5]
  • Sullivan NJ [5]
  • Liu T [5]
  • Chen M [5]
  • Shi W [5]
  • Choe M [5]
  • Margulies DH [4]
  • Natarajan K [4]
  • Meier-schellersheim M [4]
  • Jiang J [4]
  • Sgourakis N [4]
  • Sharma S [3]
  • Lei H [3]
  • Shevach EM [3]
  • Towler RR [3]
  • Hughes KT [2]
  • Wagner DA [2]
  • Gordon IJ [2]
  • Baric RS [2]
  • Mason RD [2]
  • Novik L [2]
  • Roederer M [2]
  • Widge AT [2]
  • Hait SH [2]
  • Moore PL [2]
  • Deme JC [2]
  • Lea SM [2]
  • Phung E [2]
  • Ruckwardt TJ [2]
  • Oloniniyi OK [2]
  • Narpala SR [2]
  • Sullivan NJ [2]
  • Corbett KS [2]
  • Abiona OM [2]
  • Martinez DR [2]
  • Chang LA [2]
  • Gaudinski MR [2]
  • Mascola JR [2]
  • Doria-rose NA [2]
  • Schmidt SD [2]
  • Johnson S [2]
  • Furlong EJ [2]
  • Cale EM [2]
  • Darko S [2]
  • Choe M [2]
  • Stringham CD [2]
  • Mcdermott AB [2]
  • Nazzari AF [2]
  • Dipiazza AT [2]
  • Kwong PD [2]
  • Eren E [1]

Journal

  • SCIENCE [7]
  • COMMUN BIOL [3]
  • NAT MICROBIOL [2]
  • BIORXIV [1]
  • RES SQ [1]
  • STRUCTURE [1]

Software

  • CRYOSPARC [11]
  • CISTEM [1]

Microscope

  • FEI TITAN KRIOS [12]
  • TFS KRIOS [3]

Electron Source

  • FIELD EMISSION GUN [15]

Film or detector model

  • OTHER [8]
  • GATAN K3 BIOQUANTUM 6K X 4K [4]
  • GATAN K3 6K X 4K [2]
  • GATAN K2 BASE 4K X 4K [1]

External links

  • PDB [15]
  • UniProt [15]
  • AlphaFold DB [14]
  • PDBe-Kb [14]
  • InterPro [13]
  • Pfam [13]
  • Gene Ontology [10]
  • ChEBI [6]
  • ChEMBL [6]
  • Complex Portal [5]
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Showing 1 - 10 of 15. Page 1 of 2
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EMD-46602
Download Map
3D View
CryoEM structure of anti-MHC-I Fab B1.23.2 complex with HLA-B44:05
Composite map
CryoEM
Release date: Feb. 11, 2026
Resolution: 3.31 Å
EM Method: Single-particle
Fitted PDBs: 9d74
Q-score: 0.393
Similar entry percentile: 23%

Jiang J, Panda AK, Natarajan K, Lei H, Sharma S, Boyd LF, Towler RR, Chempati S, Ahmad J, Morton AJ, Lang ZC, Sun Y, Sgourakis N, Meier-Schellersheim M, Huang RK, Shevach EM, Margulies DH

Commun Biol (2026) 9 [ Pubmed: 41629525 DOI: doi:10.1038/s42003-026-09641-8 ]

EMD-46600
Download Map
3D View
CryoEM structure of anti-MHC-I Fab M1/42 complex with H2-Dd
CryoEM
Release date: Feb. 4, 2026
Resolution: 2.67 Å
EM Method: Single-particle
Fitted PDBs: 9d72
Q-score: 0.34
Similar entry percentile: 3%

Jiang J, Panda AK, Natarajan K, Lei H, Sharma S, Boyd LF, Towler RR, Chempati S, Ahmad J, Morton AJ, Lang ZC, Sun Y, Sgourakis N, Meier-Schellersheim M, Huang RK, Shevach EM, Margulies DH

Res Sq (2025) [ DOI: doi:10.21203/rs.3.rs-7133881/v1 Pubmed: 41333432 ]

EMD-46601
Download Map
3D View
CryoEM structure of anti-MHC-I mAb B1.23.2 complex with HLA-B44:05
CryoEM
Release date: Feb. 4, 2026
Resolution: 3.02 Å
EM Method: Single-particle
Fitted PDBs: 9d73
Q-score: 0.492
Similar entry percentile: 52%

Jiang J, Panda AK, Natarajan K, Lei H, Sharma S, Boyd LF, Towler RR, Chempati S, Ahmad J, Morton AJ, Lang ZC, Sun Y, Sgourakis N, Meier-Schellersheim M, Huang RK, Shevach EM, Margulies DH

Commun Biol (2026) 9 [ Pubmed: 41629525 DOI: doi:10.1038/s42003-026-09641-8 ]

EMD-70276
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3D View
CryoEM structure of anti-MHC-I mAb B1.23.2 Fc domains
CryoEM
Release date: Feb. 4, 2026
Resolution: 3.44 Å
EM Method: Single-particle
Fitted PDBs: 9oa9
Q-score: 0.265
Similar entry percentile: 5%

Jiang J, Panda AK, Natarajan K, Lei H, Sharma S, Boyd LF, Towler RR, Chempati S, Ahmad J, Morton AJ, Lang ZC, Sun Y, Sgourakis N, Meier-Schellersheim M, Huang RK, Shevach EM, Margulies DH

Commun Biol (2026) 9 [ Pubmed: 41629525 DOI: doi:10.1038/s42003-026-09641-8 ]

EMD-42376
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3D View
Cryo-EM structure of a single subunit of a Counterclockwise-locked form of the Salmonella enterica Typhimurium flagellar C-ring.
CryoEM
Release date: Jan. 24, 2024
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 8umd
Q-score: 0.329
Similar entry percentile: 16%

Johnson S, Deme JC, Furlong EJ, Caesar JJE, Chevance FFV, Hughes KT, Lea SM

Nat Microbiol (2024) 9 pp. 1282-1292 [ Pubmed: 38459206 DOI: doi:10.1038/s41564-024-01630-z ]

EMD-42387
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3D View
Cryo-EM structure of a single subunit of a Clockwise-locked form of the Salmonella enterica Typhimurium flagellar C-ring.
CryoEM
Release date: Jan. 24, 2024
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 8umx
Q-score: 0.282
Similar entry percentile: 19%

Johnson S, Deme JC, Furlong EJ, Caesar JJE, Chevance FFV, Hughes KT, Lea SM

Nat Microbiol (2024) 9 pp. 1282-1292 [ Pubmed: 38459206 DOI: doi:10.1038/s41564-024-01630-z ]

EMD-26257
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3D View
HIV-1 Rev in complex with tubulin
CryoEM
Release date: Aug. 23, 2023
Resolution: 3.53 Å
EM Method: Single-particle
Fitted PDBs: 7u0f
Q-score: 0.344
Similar entry percentile: 17%

Eren E, Watts NR, Randazzo D, Palmer I, Sackett DL, Wingfield PT

Structure (2023) 31 pp. 1233- [ Pubmed: 37572662 DOI: doi:10.1016/j.str.2023.07.009 ]

EMD-25794
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3D View
Cryo-EM structure of SARS-CoV-2 spike in complex with antibodies B1-182.1 and A19-61.1
CryoEM
Release date: March 30, 2022
Resolution: 2.83 Å
EM Method: Single-particle
Fitted PDBs: 7tb8
Q-score: 0.41
Similar entry percentile: 13%

Zhou T, Wang L, Misasi J, Pegu A, Zhang Y, Harris DR, Olia AS, Talana CA, Yang ES, Chen M, Choe M, Shi W, Teng IT, Creanga A, Jenkins C, Leung K, Liu T, Stancofski ED, Stephens T, Zhang B, Tsybovsky Y, Graham BS, Mascola JR, Sullivan NJ, Kwong PD

Science (2022) 376 pp. eabn8897-eabn8897 [ Pubmed: 35324257 DOI: doi:10.1126/science.abn8897 ]

EMD-25797
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3D View
Locally refined region of SARS-CoV-2 spike in complex with antibodies B1-182.1 and A19-61.1
CryoEM
Release date: March 30, 2022
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7tbf
Q-score: 0.498
Similar entry percentile: 58%

Zhou T, Wang L, Misasi J, Pegu A, Zhang Y, Harris DR, Olia AS, Talana CA, Yang ES, Chen M, Choe M, Shi W, Teng IT, Creanga A, Jenkins C, Leung K, Liu T, Stancofski ED, Stephens T, Zhang B, Tsybovsky Y, Graham BS, Mascola JR, Sullivan NJ, Kwong PD

Science (2022) 376 pp. eabn8897-eabn8897 [ Pubmed: 35324257 DOI: doi:10.1126/science.abn8897 ]

EMD-25806
Download Map
3D View
Locally refined region of SARS-CoV-2 spike in complex with antibody A19-46.1
CryoEM
Release date: March 30, 2022
Resolution: 5.08 Å
EM Method: Single-particle
Fitted PDBs: 7tc9
Q-score: 0.221
Similar entry percentile: 51%

Zhou T, Wang L, Misasi J, Pegu A, Zhang Y, Harris DR, Olia AS, Talana CA, Yang ES, Chen M, Choe M, Shi W, Teng IT, Creanga A, Jenkins C, Leung K, Liu T, Stancofski ED, Stephens T, Zhang B, Tsybovsky Y, Graham BS, Mascola JR, Sullivan NJ, Kwong PD

Science (2022) 376 pp. eabn8897-eabn8897 [ Pubmed: 35324257 DOI: doi:10.1126/science.abn8897 ]

Sort by: Download
Showing 1 - 10 of 15. Page 1 of 2
Display:
Statistics
×

Download


Preview 10 entries View All Download file

Filter By

Current Database

  • EMDB [15]

Current status

  • REL [15]

Sample type

  • Complex [15]
  • Protein [15]
  • Ligand [6]

Organism

  • Homo sapiens [10]
  • Severe acute respiratory syndrome coronavirus [8]
  • Synthetic construct [3]
  • Salmonella enterica [2]
  • Mus musculus [1]
  • Rattus norvegicus [1]
  • Human immunodeficiency virus 1 [1]
  • Sus scrofa [1]

EM Method

  • Single-particle [15]

Resolution

  • ≥ 2Å and < 3Å [2]
  • ≥ 3Å and < 4Å [11]
  • ≥ 4Å and < 5Å [1]
  • ≥ 5Å and < 6Å [1]

Model molecular weight

  • 50-100 kDa [6]
  • 100-250 kDa [3]
  • 250-500 kDa [2]
  • 500-1000 kDa [3]
  • 2-5 MDa [1]

Release Date

  • 2026 [4]
  • 2024 [2]
  • 2023 [1]
  • 2022 [6]
  • 2021 [2]

Author by name

  • Graham BS [8]
  • Kwong PD [8]
  • Leung K [8]
  • Liu T [8]
  • Mascola JR [8]
  • Misasi J [8]
  • Olia AS [8]
  • Pegu A [8]
  • Shi W [8]
  • Stephens T [8]
  • Sullivan NJ [8]
  • Talana CA [8]
  • Teng IT [8]
  • Tsybovsky Y [8]
  • Wang L [8]
  • Yang ES [8]
  • Zhang B [8]
  • Zhang Y [8]
  • Zhou T [8]
  • Choe M [7]
  • Chen M [5]
  • Creanga A [5]
  • Harris DR [5]
  • Jenkins C [5]
  • Stancofski ED [5]
  • Tsybovsky T [5]
  • Ahmad J [4]
  • Boyd LF [4]
  • Chempati S [4]
  • Huang R [4]
  • Huang RK [4]
  • Jiang J [4]
  • Lang ZC [4]
  • Lei H [4]
  • Margulies DH [4]
  • Meier-schellersheim M [4]
  • Morton AJ [4]
  • Natarajan K [4]
  • Panda AK [4]
  • Sgourakis N [4]
  • Sharma S [4]
  • Shevach EM [4]
  • Sun Y [4]
  • Towler RR [4]
  • Abiona OM [3]
  • Baric RS [3]
  • Cale EM [3]
  • Chang LA [3]
  • Corbett KS [3]
  • Darko S [3]
  • Dipiazza AT [3]
  • Doria-rose NA [3]
  • Douek DC [3]
  • Gaudinski MR [3]
  • Gordon IJ [3]
  • Hatcher C [3]
  • Ledgerwood JE [3]
  • Martinez DR [3]
  • Mason RD [3]
  • Mcdermott AB [3]
  • Narpala SR [3]
  • Novik L [3]
  • Phung E [3]
  • Roederer M [3]
  • Ruckwardt TJ [3]
  • Schramm CA [3]
  • Stringham CD [3]
  • Widge AT [3]
  • Antia A [2]
  • Caesar JJE [2]
  • Chevance FFV [2]
  • Davis RL [2]
  • Deme JC [2]
  • Furlong EJ [2]
  • Hait SH [2]
  • Henry AR [2]
  • Hermanus T [2]
  • Hughes KT [2]
  • Johnson S [2]
  • Kgagudi P [2]
  • Laboune F [2]
  • Lea SM [2]
  • Moore PL [2]
  • Nazzari AF [2]
  • O Connell S [2]
  • O Dell S [2]
  • Oloniniyi OK [2]
  • Schmidt SD [2]
  • Wagner DA [2]
  • Eren E [1]
  • Nazzari A [1]
  • Oloninyi OK [1]
  • Palmer I [1]
  • Randazzo D [1]
  • Ransier A [1]
  • Sackett DL [1]
  • Wagner D [1]
  • Watts NR [1]
  • Wingfield PT [1]

Author by ORCID

  • Misasi J [7]
  • Graham BS [7]
  • Zhang B [7]
  • Talana CA [7]
  • Zhou T [7]
  • Zhang Y [7]
  • Wang L [7]
  • Leung K [7]
  • Olia AS [7]
  • Yang ES [7]
  • Pegu A [7]
  • Mascola JR [5]
  • Tsybovsky Y [5]
  • Kwong PD [5]
  • Creanga A [5]
  • Jenkins C [5]
  • Harris DR [5]
  • Teng IT [5]
  • Sullivan NJ [5]
  • Liu T [5]
  • Chen M [5]
  • Shi W [5]
  • Choe M [5]
  • Margulies DH [4]
  • Natarajan K [4]
  • Meier-schellersheim M [4]
  • Jiang J [4]
  • Sgourakis N [4]
  • Sharma S [3]
  • Lei H [3]
  • Shevach EM [3]
  • Towler RR [3]
  • Hughes KT [2]
  • Wagner DA [2]
  • Gordon IJ [2]
  • Baric RS [2]
  • Mason RD [2]
  • Novik L [2]
  • Roederer M [2]
  • Widge AT [2]
  • Hait SH [2]
  • Moore PL [2]
  • Deme JC [2]
  • Lea SM [2]
  • Phung E [2]
  • Ruckwardt TJ [2]
  • Oloniniyi OK [2]
  • Narpala SR [2]
  • Sullivan NJ [2]
  • Corbett KS [2]
  • Abiona OM [2]
  • Martinez DR [2]
  • Chang LA [2]
  • Gaudinski MR [2]
  • Mascola JR [2]
  • Doria-rose NA [2]
  • Schmidt SD [2]
  • Johnson S [2]
  • Furlong EJ [2]
  • Cale EM [2]
  • Darko S [2]
  • Choe M [2]
  • Stringham CD [2]
  • Mcdermott AB [2]
  • Nazzari AF [2]
  • Dipiazza AT [2]
  • Kwong PD [2]
  • Eren E [1]

Journal

  • SCIENCE [7]
  • COMMUN BIOL [3]
  • NAT MICROBIOL [2]
  • BIORXIV [1]
  • RES SQ [1]
  • STRUCTURE [1]

Software

  • CRYOSPARC [11]
  • CISTEM [1]

Microscope

  • FEI TITAN KRIOS [12]
  • TFS KRIOS [3]

Electron Source

  • FIELD EMISSION GUN [15]

Film or detector model

  • OTHER [8]
  • GATAN K3 BIOQUANTUM 6K X 4K [4]
  • GATAN K3 6K X 4K [2]
  • GATAN K2 BASE 4K X 4K [1]

External links

  • PDB [15]
  • UniProt [15]
  • AlphaFold DB [14]
  • PDBe-Kb [14]
  • InterPro [13]
  • Pfam [13]
  • Gene Ontology [10]
  • ChEBI [6]
  • ChEMBL [6]
  • Complex Portal [5]