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Substrates for peptidase S26.001: signal peptidase I

Summary Alignment Tree Sequences Sequence features Distribution Structure Literature Substrates Pharma

Peptide and protein substrates that are thought to be physiologically relevant are indicated by P. Peptide and protein substrates that are thought to be pathologically relevant are indicated by D. Peptide and protein substrates that are not physiologically relevant are indicated by N. Synthetic substrates are indicated by S. Click on the symbol to show only physiological, non-physiological or synthetic substrates, or here to display all substrates. How cleavage sites have been identified are indicated by the following evidence codes: NT = N-terminal sequencing, MS = mass spectroscopy, MU = mutation, CS = consensus sequence, LC = liquid chromatography. To see all annotated cleavages for a protein substrate, click on the UniProt Accession.

Substrate Uniprot Residue range Cleavage Site Cleavage type Evidence P4 P3 P2 P1 P1' P2' P3' P4' Reference CutDB MERNUM
24 kDa outer membrane protein P80604 1-257 peptide-Ser21+Ile-peptide P NT Ser Ser Phe Ser Ile Gly Asn Asn
26 kDa periplasmic immunogenic protein Q44642 1-259 peptide-Ala28+Gln-peptide P NT Pro Ala Phe Ala Gln Glu Asn Gln Rossetti et al., 1996
4-cresol dehydrogenase [hydroxylating] cytochrome c subunit P09787 1-113 peptide-Ala33+Asp-peptide P NT Gln Ala Gln Ala Asp Ser Gln Trp McIntire et al., 1986
4-phytase P07102 1-432 peptide-Ala22+Gln-peptide P NT Ser Ala Phe Ala Gln Ser Glu Pro Greiner et al., 1993
47 kDa outer membrane protein P80603 1-428 peptide-Ala25+Ala-peptide P NT Ser Ala Ser Ala Ala Ala Phe Gln
ABC transporter periplasmic-binding protein yphF P77269 1-327 peptide-Ala26+Ala-peptide P NT Phe Ala Arg Ala Ala Glu Lys Glu Link et al., 1997
ABC transporter periplasmic-binding protein ytfQ P39325 1-318 peptide-Ala21+Ala-peptide P NT Met Ala Leu Ala Ala Pro Leu Thr Link et al., 1997
acid shock protein P36560 1-102 peptide-Ala21+Ala-peptide P NT Ala Ala Phe Ala Ala Glu Thr Thr Seputiene et al., 2003
acyl-CoA thioesterase I P0ADA1 1-208 peptide-Ala26+Ala-peptide P NT Arg Ala Ala Ala Ala Asp Thr Leu Karasawa et al., 1991
adhesin/invasin tibA Q9XD84 1-989 peptide-Ala54+Ala-peptide P NT Pro Ala Leu Ala Ala Ala Tyr Asp Lindenthal & Elsinghorst, 1999
AIDA-I autotransporter precursor Q03155 1-1286 peptide-Ala49+Val-peptide P NT Asn Ala Phe Ala Val Asn Ile Ser Benz & Schmidt, 1992
alanine and proline-rich secreted protein apa Q50906 1-325 peptide-Ala39+Asp-peptide P NT Thr Ala Asn Ala Asp Pro Glu Pro Romain et al., 1999
alanine and proline-rich secreted protein apa P80069 1-325 peptide-Ala39+Asp-peptide P NT Thr Ala Asn Ala Asp Pro Glu Pro Romain et al., 1993
alginate lyase Q59478 1-307 peptide-Ala20+Ala-peptide P NT Pro Ser Arg Ala Ala Val Pro Ala Baron et al., 1994
alpha-amylase P25718 1-676 peptide-Ala17+Ala-peptide P NT Phe Ala Val Ala Ala Ser Trp Thr Schneider et al., 1992
alpha-L-arabinofuranosidase C P23031 1-571 peptide-Ala37+Ala-peptide P NT Ala Ala Ser Ala Ala Cys Thr Tyr Kellett et al., 1990
amicyanin P22364 1-131 peptide-Ala26+Asp-peptide P NT Gly Ala Leu Ala Asp Lys Ala Thr Husain & Davidson, 1986
amicyanin-alpha P04172 1-119 peptide-Ala20+Ala-peptide P NT Ala Ala Leu Ala Ala Gly Ala Leu Ambler & Tobari, 1985
anaerobic dimethyl sulfoxide reductase chain A P18775 1-814 peptide-Ala45+Val-peptide P NT Ile Ala His Ala Val Asp Ser Ala Bilous et al., 1988
antigen 43 beta chain P39180 1-1039 peptide-Ala52+Ala-peptide P NT Pro Val Leu Ala Ala Asp Ile Val Link et al., 1997
antigen 85-B P0C2T2 1-325 peptide-Ala40+Phe-peptide P NT Thr Ala Gly Ala Phe Ser Arg Pro Matsuo et al., 1988
arginine-binding periplasmic protein P45091 1-239 peptide-Ala19+Gln-peptide P NT Ala Ala Ser Ala Gln Glu Leu Thr Langen et al., 2000
arginine-binding periplasmic protein 1 P30859 1-243 peptide-Ala19+Ala-peptide P NT Ser Ala Thr Ala Ala Glu Thr Ile Wilkins et al., 1998
arginine-binding periplasmic protein 2 P30860 1-243 peptide-Ala19+Ala-peptide P NT Gly Ala Ser Ala Ala Glu Lys Ile Wilkins et al., 1998
attachment invasion locus protein P16454 1-178 peptide-Ala23+Ala-peptide P NT Asn Val Tyr Ala Ala Ser Glu Ser Miller et al., 1990
auracyanin-A Q8RMH6 1-162 peptide-Ala22+Cys-peptide P NT Val Leu Ala Ala Cys Gly Gly Gly Van et al., 1999
Autoinducer 2-binding protein lsrB precursor Q8ZKQ1 1-340 peptide-Ala26+Ala-peptide P MS Thr Val Gln Ala Ala Glu Arg Ile Adkins et al., 2006
azurin P0A321 1-150 peptide-Ala21+Ala-peptide P NT Pro Val Leu Ala Ala Glu Cys Ser
bacteriocin ubericin-A A9Q0M7 1-70 peptide-Gly21+Lys-peptide P NT Ile Ile Gly Gly Lys Thr Val Asn Heng et al., 2007
beta-lactamase CTX-M-1 P28585 1-291 peptide-Ala28+Gln-peptide P NT Pro Leu Tyr Ala Gln Thr Ala Asp Barthelemy et al., 1992
beta-lactamase OXA-2 P0A1V8 1-275 peptide-Ala21+Gln-peptide P NT Phe Ala His Ala Gln Glu Gly Thr Holland & Dale, 1984
beta-lactamase SHV-1 P0AD63 1-286 peptide-Ala21+Ser-peptide P NT Ala Val His Ala Ser Pro Gln Pro Barthelemy et al., 1987
beta-lactamase SHV-2 P0A9Z7 1-286 peptide-Ala21+Ser-peptide P NT Ala Val His Ala Ser Pro Gln Pro Barthelemy et al., 1988
beta-lactamase TEM P62593 1-286 peptide-Ala23+His-peptide P NT Pro Val Phe Ala His Pro Glu Thr Brun et al., 1994
blue copper oxidase cueO P36649 1-516 peptide-Ala28+Ala-peptide P NT Ala Val Phe Ala Ala Glu Arg Pro Link et al., 1997
Blue copper oxidase cueO precursor Q8ZRS2 1-536 peptide-Ala28+Ala-peptide P MS Ala Ala Phe Ala Ala Glu Arg Pro Adkins et al., 2006
C5a peptidase P15926 1-1167 peptide-Ala31+Asn-peptide P NT Asp Ile Lys Ala Asn Thr Val Thr Chen & Cleary, 1990
catalase-peroxidase Q9X6B0 1-737 peptide-Ala23+Ala-peptide P NT Thr Ala Trp Ala Ala Glu Ala Pro Garcia et al., 1999
cation efflux system protein cusF P77214 1-110 peptide-Gln21+Ala-peptide P NT Phe Asn Ala Gln Ala Asn Glu His Franke et al., 2003
CFA/I fimbrial subunit B P02971 1-170 peptide-Ala23+Val-peptide P NT Ser Ala Ser Ala Val Glu Lys Asn Hall et al., 1989
chaperone protein fimC P31697 1-241 peptide-Ala36+Gly-peptide P NT Arg Ala Glu Ala Gly Val Ala Leu Klemm 1992
chaperone protein skp P0AEU7 1-161 peptide-Ala20+Ala-peptide P NT Ser Ala Gln Ala Ala Asp Lys Ile Link et al., 1997
chaperone protein skp P0A1Z2 1-161 peptide-Ala20+Ala-peptide P NT Ser Ala Gln Ala Ala Asp Lys Ile Koski et al., 1989
Chaperone protein Skp P0AEU7 21-161 peptide-Ala20+Ala-peptide N MS Ser Ala Gln Ala Ala Asp Lys Ile Biniossek et al., 2016
chaperone surA P0ABZ6 1-428 peptide-Ala20+Ala-peptide P NT Thr Ser Phe Ala Ala Pro Gln Val Wilkins et al., 1998
Chaperone surA precursor Q7CR87 1-428 peptide-Ala20+Ala-peptide P MS Thr Ser Phe Ala Ala Pro Gln Val Adkins et al., 2006
chaperone-like protein hdeA P0AES9 1-110 peptide-Ala21+Ala-peptide P NT Val Ser Asn Ala Ala Asp Ala Gln Wasinger & Humphery-Smith, 1998
chaperone-like protein hdeA Q2YK18 1-114 peptide-Ala26+Glu-peptide P NT Gly Ala Met Ala Glu Ser Ala Lys Valderas et al., 2005
cholera enterotoxin subunit A2 P01555 1-258 peptide-Ala18+Asn-peptide P NT Phe Ser Tyr Ala Asn Asp Asp Lys Klapper et al., 1976
cholera enterotoxin subunit B P01556 1-124 peptide-Gly21+Thr-peptide P NT Tyr Ala His Gly Thr Pro Gln Asn Lai 1977
class B acid phosphatase P0AE22 1-237 peptide-Ala25+Ser-peptide P NT Val Ala Leu Ala Ser Ser Pro Ser Link et al., 1997
Class B acid phosphatase precursor P58683 1-237 peptide-Ala23+Leu-peptide P MS Ser Ala Asn Ala Leu Val Ser Ser Adkins et al., 2006
class C beta-lactamase P00811 1-377 peptide-Ala19+Ala-peptide P NT Ser Thr Phe Ala Ala Pro Gln Gln Jaurin & Grundstroem, 1981
colicin I receptor P17315 1-663 peptide-Ala25+Val-peptide P NT Pro Val Leu Ala Val Asp Asp Asp Griggs et al., 1987
CS1 fimbrial subunit A P0ABW7 1-171 peptide-Ala23+Val-peptide P NT Gly Ala Ser Ala Val Glu Lys Thr Hall et al., 1989
CS3 fimbrial subunit A P15488 1-168 peptide-Ala22+Ala-peptide P NT Tyr Ser Leu Ala Ala Ala Gly Pro Hall et al., 1989
CS5 fimbrial subunit P33781 1-203 peptide-Ala22+Ala-peptide P NT Ser Val Leu Ala Ala Val Thr Asn Heuzenroeder et al., 1989
cystine-binding periplasmic protein P0AEM9 1-266 peptide-Ala29+Asp-peptide P NT Lys Ser Phe Ala Asp Glu Gly Leu Quadroni et al., 1996
cytochrome C oxidase subunit 2 Q8NNK2 1-359 peptide-Gly28+Cys-peptide P NT Ala Met Ala Gly Cys Glu Val Ala Sakamoto et al., 2001
cytochrome C-550 P00096 1-155 peptide-Ala20+Gln-peptide P NT Pro Ala Ala Ala Gln Asp Gly Asp Ambler et al., 1981
cytochrome C-551 P00101 1-104 peptide-Ala22+Gln-peptide P NT Pro Ala Leu Ala Gln Asp Gly Glu Ambler & Wynn, 1973
cytochrome C-551 P07625 1-139 peptide-Ala20+Glu-peptide P NT Pro Val Phe Ala Glu Gly Asp Ile Okamura et al., 1987
cytochrome C-552 P0ABK9 1-478 peptide-Ala26+Glu-peptide P NT Ser Val His Ala Glu Gln Thr Ala Darwin et al., 1993
cytochrome C-552 P24037 1-291 peptide-Ala23+Ala-peptide P NT Gly Ala Met Ala Ala Ala Pro Ala Denariaz et al., 1989
cytochrome C-552 Q9S1E5 1-507 peptide-Ala22+Ser-peptide P NT Gly Leu Leu Ala Ser Asn Ile Asn Simon et al., 2000
cytochrome C-552 Q5SME3 1-148 peptide-Ala17+Gln-peptide P NT Leu Ala Leu Ala Gln Ala Asp Gly Titani et al., 1985
cytochrome C-553 O25825 1-96 peptide-Ala19+Thr-peptide P NT Ala Leu Met Ala Thr Asp Val Lys Koyanagi et al., 2000
cytochrome C-555 P04369 1-123 peptide-Ser27+Ala-peptide P NT Pro Ala Phe Ser Ala Pro Val Asp Ambler et al., 1986
cytochrome C-type protein SHP P81238 1-129 peptide-Ala17+Gly-peptide P NT Pro Ala Leu Ala Gly Asp Thr Ser Klarskov et al., 1998
cytochrome C1 P23135 1-272 peptide-Ala24+Asn-peptide P NT Ala Ala Gln Ala Asn Glu Gly Gly Majewski & Trebst, 1990
cytochrome C2 Q3J164 1-145 peptide-Ala21+Gln-peptide P NT Pro Ala Leu Ala Gln Glu Gly Asp
cytochrome C4 P43302 1-210 peptide-Ala20+Ala-peptide P NT Leu Ala His Ala Ala Gly Asp Ala Ambler et al., 1984
cytochrome C551 peroxidase P55929 1-334 peptide-Ala26+Ala-peptide P NT Gly Val Met Ala Ala Asn Glu Pro Arciero & Hooper, 1994
cytochrome C7 P81894 1-90 peptide-Ala20+Ala-peptide P NT Leu Ala Phe Ala Ala Asp Glu Leu
D-Ala-D-Ala peptidase C P24228 1-477 peptide-Ala20+Ala-peptide P NT Ser Val Gln Ala Ala Asn Val Asp Mottl et al., 1991
D-alanyl-D-alanine carboxypeptidase dacC P08506 1-400 peptide-Ala27+Ala-peptide P NT Thr Ala Phe Ala Ala Glu Gln Thr Waxman et al., 1982
D-galactose-binding periplasmic protein P0AEE5 1-332 peptide-Ala23+Ala-peptide P NT Ala Ala His Ala Ala Asp Thr Arg Link et al., 1997
D-galactose-binding periplasmic protein P44883 1-331 peptide-Ala24+Ala-peptide P NT Ala Ser Phe Ala Ala Asp Asn Arg Langen et al., 2000
D-galactose-binding periplasmic protein precursor P23905 1-332 peptide-Ala23+Ala-peptide P MS His Ala His Ala Ala Asp Thr Arg Adkins et al., 2006
D-ribose-binding periplasmic protein P02925 1-296 peptide-Ala25+Lys-peptide P NT Asn Ala Met Ala Lys Asp Thr Ile Link et al., 1997
D-ribose-binding periplasmic protein P44737 1-292 peptide-Ala23+Gln-peptide P NT Ser Ala Ser Ala Gln Asp Thr Ile Langen et al., 2000
D-ribose-binding periplasmic protein P0A2C5 1-296 peptide-Ala25+Lys-peptide P NT Asn Ala Met Ala Lys Asp Thr Ile Buckenmeyer & Hermodson, 1983
D-xylose-binding periplasmic protein P37387 1-330 peptide-Ala23+Lys-peptide P NT Ala Ala His Ala Lys Glu Val Lys Link et al., 1997
Decanoyl-Leu-Thr-Pro-Thr-Ala-Lys-Ala-Ala-Ser-Lys-Ile-Asp-Asp-OH Decanoyl-Leu-Thr-Pro-Thr-Ala-Lys-Ala+Ala-Ser-Lys-Ile-Asp-Asp-OH S Thr Ala Lys Ala Ala Ser Lys Ile Bruton et al., 2003
DegP peptidase P0C0V0 1-474 peptide-Ala26+Ala-peptide P NT Ser Ala Thr Ala Ala Glu Thr Ser Wilkins et al., 1998
DegQ peptidase P39099 1-455 peptide-Ala27+Ser-peptide P NT Gln Ala Val Ala Ser Ile Pro Gly Waller & Sauer, 1996
diheme cytochrome c napB P0ABL3 1-149 peptide-Ala27+Ala-peptide P NT Ala Val Trp Ala Ala Asn Gly Val Thomas et al., 1999
dimethyl sulfoxide reductase Q57366 1-822 peptide-Ala42+Glu-peptide P NT Gly Ala Arg Ala Glu Gly Leu Ala Barber et al., 1995
dr hemagglutinin structural subunit P24093 1-160 peptide-Ala21+Gly-peptide P NT Ser Ala His Ala Gly Phe Thr Pro Kist et al., 1990
ecotin P23827 1-162 peptide-Ala20+Ala-peptide P NT Ser Ala Trp Ala Ala Glu Ser Val Link et al., 1997
Ecotin precursor Q8ZNH4 1-164 peptide-Ala20+Asn-peptide P MS Ser Ala Trp Ala Asn Asn Gly Asp Adkins et al., 2006
endo-1,4-beta-xylanase B P23030 1-592 peptide-Ala37+Ala-peptide P NT Asn Ala Ser Ala Ala Cys Thr Tyr Kellett et al., 1990
endoglucanase B P18126 1-511 peptide-Ala29+Ala-peptide P NT Ser Ile Gln Ala Ala Val Cys Glu Gilbert et al., 1990
endoglucanase C P27033 1-748 peptide-Ala37+Gly-peptide P NT Val Ala Ala Ala Gly Cys Glu Tyr Ferreira et al., 1991
EspC peptidase Q9EZE7 1-1305 peptide-Ala53+Ala-peptide P NT Ala Ser Gln Ala Ala Gln Leu Asn Kenny & Finlay, 1995
EspP peptidase O32591 1-1300 peptide-Ala55+Ser-peptide P NT Tyr Ser Phe Ala Ser Gln Met Asp Djafari et al., 1997
espP peptidase Q7BSW5 1-1300 peptide-Ala55+Ser-peptide P NT Tyr Ser Phe Ala Ser Gln Met Asp Brunder et al., 1997
fe(3+) dicitrate transport protein fecA P13036 1-774 peptide-Ala33+Ala-peptide P NT Ser Ala Phe Ala Ala Gln Val Asn Pressler et al., 1988
ferrichrome-iron receptor P06971 1-747 peptide-Ala33+Ala-peptide P NT Tyr Ala Gln Ala Ala Val Glu Pro Coulton et al., 1986
FhuE receptor P16869 1-729 peptide-Ala36+Ala-peptide P NT Ala Ala Phe Ala Ala Pro Ala Thr Sauer et al., 1987
fimbrial adhesin papG P13720 1-335 peptide-Ala21+Gly-peptide P NT Asp Ala Leu Ala Gly Trp His Asn Hoschuetzky et al., 1989
fimbrial protein myfA P33406 1-159 peptide-Ala29+Glu-peptide P NT Met Val His Ala Glu Pro Thr Val Iriarte et al., 1993
fimbrial subunit type 1 P12903 1-182 peptide-Ala23+Asp-peptide P NT Ala Ala Leu Ala Asp Thr Thr Thr Fader et al., 1982
fimbrial subunit type 1 P12266 1-182 peptide-Ala23+Asp-peptide P NT Ala Ala Leu Ala Asp Thr Thr Thr Fader et al., 1982
FKBP-type peptidyl-prolyl cis-trans isomerase fkpA P45523 1-270 peptide-Ala25+Ala-peptide P NT Ile Thr Phe Ala Ala Glu Ala Ala Link et al., 1997
flagellar protein flhE P0A1N4 1-130 peptide-Ala16+Ala-peptide P NT Thr Val Gln Ala Ala Gly Glu Gly Minamino et al., 1994
flexible pilin P19369 1-70 peptide-Ala24+Glu-peptide P NT Ala Ala His Ala Glu Gly Gly Ile Ho et al., 1990
FRET substrate FmocK(Dabcyl)AAARLURA+AE(Edans)-beta-Ala-D-Arg-M FmocK(Dabcyl)AAARLURA+AE(Edans)-beta-Ala-D-Arg-M S Leu Aba Arg Ala Ala Glu Ala DAr Ekici et al., 2009
FRET substrate FmocK(Dabcyl)AAAUPAKA+AE(Edans)-beta-Ala-D-Arg-M FmocK(Dabcyl)AAAUPAKA+AE(Edans)-beta-Ala-D-Arg-M S Pro Ala Lys Ala Ala Glu Ala DAr Ekici et al., 2009
FRET substrate FmocK(Dabcyl)AAEKSAHA+AE(Edans)-beta-Ala-D-Arg-M FmocK(Dabcyl)AAEKSAHA+AE(Edans)-beta-Ala-D-Arg-M S Ser Ala His Ala Ala Glu Ala DAr Ekici et al., 2009
FRET substrate FmocK(Dabcyl)AAGKTUKA+AE(Edans)-beta-Ala-D-Arg-M FmocK(Dabcyl)AAGKTUKA+AE(Edans)-beta-Ala-D-Arg-M S Thr Aba Lys Ala Ala Glu Ala DAr Ekici et al., 2009
FRET substrate FmocK(Dabcyl)AAHEDULA+AE(Edans)-beta-Ala-D-Arg-M FmocK(Dabcyl)AAHEDULA+AE(Edans)-beta-Ala-D-Arg-M S Asp Aba Leu Ala Ala Glu Ala DAr Ekici et al., 2009
FRET substrate FmocK(Dabcyl)AANRNAQA+AE(Edans)-beta-Ala-D-Arg-M FmocK(Dabcyl)AANRNAQA+AE(Edans)-beta-Ala-D-Arg-M S Asn Ala Gln Ala Ala Glu Ala DAr Ekici et al., 2009
FRET substrate FmocK(Dabcyl)AAPGLAEA+AE(Edans)-beta-Ala-D-Arg-M FmocK(Dabcyl)AAPGLAEA+AE(Edans)-beta-Ala-D-Arg-M S Leu Ala Glu Ala Ala Glu Ala DAr Ekici et al., 2009
FRET substrate FmocK(Dabcyl)AAPGVALA+AE(Edans)-beta-Ala-D-Arg-M FmocK(Dabcyl)AAPGVALA+AE(Edans)-beta-Ala-D-Arg-M S Val Ala Leu Ala Ala Glu Ala DAr Ekici et al., 2009
FRET substrate FmocK(Dabcyl)AAPGYAEA+AE(Edans)-beta-Ala-D-Arg-M FmocK(Dabcyl)AAPGYAEA+AE(Edans)-beta-Ala-D-Arg-M S Tyr Ala Glu Ala Ala Glu Ala DAr Ekici et al., 2009
FRET substrate FmocK(Dabcyl)AAPKGUKA+AE(Edans)-beta-Ala-D-Arg-M FmocK(Dabcyl)AAPKGUKA+AE(Edans)-beta-Ala-D-Arg-M S Gly Aba Lys Ala Ala Glu Ala DAr Ekici et al., 2009
FRET substrate FmocK(Dabcyl)AAPKKSLA+AE(Edans)-beta-Ala-D-Arg-M FmocK(Dabcyl)AAPKKSLA+AE(Edans)-beta-Ala-D-Arg-M S Lys Ser Leu Ala Ala Glu Ala DAr Ekici et al., 2009
FRET substrate FmocK(Dabcyl)AAPKRUAA+AE(Edans)-beta-Ala-D-Arg-M FmocK(Dabcyl)AAPKRUAA+AE(Edans)-beta-Ala-D-Arg-M S Arg Aba Ala Ala Ala Glu Ala DAr Ekici et al., 2009
FRET substrate FmocK(Dabcyl)AAPKRVEA+AE(Edans)-beta-Ala-D-Arg-M FmocK(Dabcyl)AAPKRVEA+AE(Edans)-beta-Ala-D-Arg-M S Arg Val Glu Ala Ala Glu Ala DAr Ekici et al., 2009
FRET substrate FmocK(Dabcyl)AAPKUUQA+AE(Edans)-beta-Ala-D-Arg-M FmocK(Dabcyl)AAPKUUQA+AE(Edans)-beta-Ala-D-Arg-M S Aba Aba Gln Ala Ala Glu Ala DAr Ekici et al., 2009
FRET substrate FmocK(Dabcyl)AAPNKUUA+AE(Edans)-beta-Ala-D-Arg-M FmocK(Dabcyl)AAPNKUUA+AE(Edans)-beta-Ala-D-Arg-M S Lys Aba Aba Ala Ala Glu Ala DAr Ekici et al., 2009
FRET substrate FmocK(Dabcyl)AAPRAVEA+AE(Edans)-beta-Ala-D-Arg-M FmocK(Dabcyl)AAPRAVEA+AE(Edans)-beta-Ala-D-Arg-M S Ala Val Glu Ala Ala Glu Ala DAr Ekici et al., 2009
FRET substrate FmocK(Dabcyl)AAPRKATA+AE(Edans)-beta-Ala-D-Arg-M FmocK(Dabcyl)AAPRKATA+AE(Edans)-beta-Ala-D-Arg-M S Lys Ala Thr Ala Ala Glu Ala DAr Ekici et al., 2009
FRET substrate FmocK(Dabcyl)AAPRLAUA+AE(Edans)-beta-Ala-D-Arg-M FmocK(Dabcyl)AAPRLAUA+AE(Edans)-beta-Ala-D-Arg-M S Leu Ala Aba Ala Ala Glu Ala DAr Ekici et al., 2009
FRET substrate FmocK(Dabcyl)AAPRNUFA+AE(Edans)-beta-Ala-D-Arg-M FmocK(Dabcyl)AAPRNUFA+AE(Edans)-beta-Ala-D-Arg-M S Asn Aba Phe Ala Ala Glu Ala DAr Ekici et al., 2009
FRET substrate FmocK(Dabcyl)AAQKRAQA+AE(Edans)-beta-Ala-D-Arg-M FmocK(Dabcyl)AAQKRAQA+AE(Edans)-beta-Ala-D-Arg-M S Arg Ala Gln Ala Ala Glu Ala DAr Ekici et al., 2009
FRET substrate FmocK(Dabcyl)AARATAWA+AE(Edans)-beta-Ala-D-Arg-M FmocK(Dabcyl)AARATAWA+AE(Edans)-beta-Ala-D-Arg-M S Thr Ala Trp Ala Ala Glu Ala DAr Ekici et al., 2009
FRET substrate FmocK(Dabcyl)AAUQEAQA+AE(Edans)-beta-Ala-D-Arg-M FmocK(Dabcyl)AAUQEAQA+AE(Edans)-beta-Ala-D-Arg-M S Glu Ala Gln Ala Ala Glu Ala DAr Ekici et al., 2009
FRET substrate FmocK(Dabcyl)AAWUFAQA+AE(Edans)-beta-Ala-D-Arg-M FmocK(Dabcyl)AAWUFAQA+AE(Edans)-beta-Ala-D-Arg-M S Phe Ala Gln Ala Ala Glu Ala DAr Ekici et al., 2009
FRET substrate FmocK(Dabcyl)AAXXEANA+AE(Edans)-beta-Ala-D-Arg-M FmocK(Dabcyl)AAXXEANA+AE(Edans)-beta-Ala-D-Arg-M S Glu Ala Asn Ala Ala Glu Ala DAr Ekici et al., 2009
FRET substrate FmocK(Dabcyl)AAXXEANA+AE(Edans)-beta-Ala-D-Arg-M FmocK(Dabcyl)AAVXXAKA+AE(Edans)-beta-Ala-D-Arg-M S Xaa Ala Lys Ala Ala Glu Ala DAr Ekici et al., 2009
fumarate reductase flavoprotein subunit Q07WU7 1-596 peptide-Ala25+Ala-peptide P NT Thr Ala Val Ala Ala Asp Asn Leu Pealing et al., 1992
fumarate reductase flavoprotein subunit Q9Z4P0 1-588 peptide-Ala22+Lys-peptide P NT Thr Ala Met Ala Lys Thr Pro Asp Dobbin et al., 1999
gamma-glutamyltransferase 1 (bacterial-type) P18956 1-580 peptide-Ala25+Ala-peptide P NT Ser Ala Ala Ala Ala Pro Pro Ala Suzuki et al., 1989
glucans biosynthesis protein D P40120 1-551 peptide-Ala32+Ala-peptide P NT Ala Ala Phe Ala Ala Asp Ser Asp Link et al., 1997
Glucans biosynthesis protein D precursor Q8ZPB3 1-551 peptide-Ala32+Ala-peptide P MS Ala Ala Phe Ala Ala Glu Ser Asp Adkins et al., 2006
glucans biosynthesis protein G P33136 1-511 peptide-Ala22+Phe-peptide P NT Ser Ser Trp Ala Phe Ser Ile Asp Link et al., 1997
Glucans biosynthesis protein G precursor P67557 1-511 peptide-Ala22+Phe-peptide P MS Ser Ser Trp Ala Phe Ser Ile Asp Adkins et al., 2006
gluconolactonase minor isoform Q01578 1-356 peptide-Ala35+Ala-peptide P NT Ser Ala Gln Ala Ala Lys Asn Asn Kanagasundaram & Scopes, 1992
glucose--fructose oxidoreductase Q07982 1-433 peptide-Ala52+Ala-peptide P NT Gly Leu Gln Ala Ala Thr Leu Pro Kanagasundaram & Scopes, 1992
glucose-1-phosphatase P19926 1-413 peptide-Ala22+Gln-peptide P NT Asn Ala Gln Ala Gln Thr Val Pro Link et al., 1997
Glucose-1-phosphatase precursor O33921 1-413 peptide-Ala22+Gln-peptide P MS Ala Val Gln Ala Gln Thr Thr Pro Adkins et al., 2006
glutamate/aspartate periplasmic-binding protein P37902 1-302 peptide-Ala22+Asp-peptide P NT Leu Ala Gln Ala Asp Asp Ala Ala
Glutamate/aspartate periplasmic-binding protein precursor Q9ZF60 1-302 peptide-Ala22+Glu-peptide P MS Leu Ala His Ala Glu Asp Gly Ala Adkins et al., 2006
glutamine-binding periplasmic protein P0AEQ3 1-248 peptide-Ala22+Ala-peptide P NT Ser Ser His Ala Ala Asp Lys Lys Link et al., 1997
Glutathione-binding protein gsiB precursor Q8ZQM3 1-512 peptide-Ala26+Ala-peptide P MS Pro Ala Leu Ala Ala Lys Asp Val Adkins et al., 2006
glycerophosphoryl diester phosphodiesterase P09394 1-358 peptide-Ala25+Ala-peptide P NT Ser Ala Met Ala Ala Asp Ser Asn Gonzalez-Gil et al., 1996
glycine betaine-binding periplasmic protein P0AFM2 1-330 peptide-Ala21+Ala-peptide P NT Gln Thr Phe Ala Ala Asp Leu Pro Barron et al., 1987
heat -labile enterotoxin B chain P0CK94 1-124 peptide-Gly21+Ala-peptide P NT Cys Ala His Gly Ala Pro Gln Ser Tsuji et al., 1987
heat -labile enterotoxin B chain P32890 1-124 peptide-Gly21+Ala-peptide P NT Tyr Ala His Gly Ala Pro Gln Thr Tsuji et al., 1987
heat -stable enterotoxin C O50319 1-72 peptide-Gly19+Gln-peptide P NT Gly Thr Leu Gly Gln Glu Thr Ala Yoshino et al., 1995
heme/hemopexin-binding protein P45354 1-928 peptide-Ala21+Ser-peptide P NT Ala Ala Tyr Ala Ser Thr Pro Asp Cope et al., 1994
hemoglobin-binding protease hbp O88093 1-1377 peptide-Ala52+Gly-peptide P NT Gly Ser Leu Ala Gly Thr Val Asn Otto et al., 1998
hemolysin P09545 1-741 peptide-Ala25+Asn-peptide P NT Thr Leu Leu Ala Asn Ile Asn Glu Yamamoto et al., 1990
hemolysin P16466 1-1577 peptide-Gly29+Asn-peptide P NT Asn Ala Tyr Gly Asn Gly Ile Val Uphoff & Welch, 1990
high-affinity zinc uptake system protein znuA P39172 1-310 peptide-Ala26+Ala-peptide P NT Ala Ala Asp Ala Ala Val Val Ala Wilkins et al., 1998
high-affinity zinc uptake system protein znuA P44526 1-337 peptide-Ala23+Asp-peptide P NT Met Ala Asn Ala Asp Val Leu Ala Langen et al., 2000
histidine-binding periplasmic protein P02910 1-260 peptide-Ala22+Ala-peptide P NT Ala Ala Phe Ala Ala Ile Pro Gln Hogg 1981
histidine-binding periplasmic protein P0AEU0 1-260 peptide-Ala22+Ala-peptide P NT Ala Ala Phe Ala Ala Ile Pro Gln Wilkins et al., 1998
hydrogenase-1 small chain P69739 1-372 peptide-Ala45+Leu-peptide P NT Ile Ala Trp Ala Leu Glu Asn Lys Menon et al., 1990
hydrogenase-2 small chain P69741 1-372 peptide-Ala37+Glu-peptide P NT Lys Ala Ala Ala Glu Met Ala Glu Sargent et al., 1998
IgA protease precursor Q9AES2 1-1234 peptide-Ala30+Ala-peptide P Thr Ile Gln Ala Ala Ser Lys Pro Potempa & Poulsen, 2004 17728
immunogenic protein MPB64 P0A5Q5 1-228 peptide-Ala23+Ala-peptide P NT Val Ala Thr Ala Ala Pro Lys Thr Harboe et al., 1986
immunogenic protein MPT63 P0A5Q2 1-159 peptide-Ala29+Ala-peptide P NT Val Ala Leu Ala Ala Tyr Pro Ile Horwitz et al., 1995
immunogenic protein MPT64 P0A5Q4 1-228 peptide-Ala23+Ala-peptide P NT Val Ala Thr Ala Ala Pro Lys Thr Wiker et al., 1992
inhibitor of vertebrate lysozyme P0AD59 1-157 peptide-Ala28+Gln-peptide P NT Ser Ala Met Ala Gln Asp Asp Leu Wasinger & Humphery-Smith, 1998
iron-utilization periplasmic protein P35755 1-332 peptide-Ala23+Asp-peptide P NT Asn Ser Phe Ala Asp Ile Thr Val Langen et al., 2000
K88 fimbrial protein AB P02970 1-285 peptide-Ala21+Trp-peptide P NT Met Ala His Ala Trp Met Thr Gly Klemm 1981
L-arabinose-binding periplasmic protein P02924 1-329 peptide-Ala23+Glu-peptide P NT Ser Ala Met Ala Glu Asn Leu Lys Link et al., 1997
L-asparaginase 2 P00805 1-348 peptide-Ala22+Leu-peptide P NT Ala Ala Leu Ala Leu Pro Asn Ile Maita & Matsuda, 1980
leu/Ile/Val-binding protein P0AD96 1-367 peptide-Ala23+Glu-peptide P NT Met Ala Leu Ala Glu Asp Ile Lys
leucine-specific-binding protein P04816 1-369 peptide-Ala23+Asp-peptide P NT Thr Ala Met Ala Asp Asp Ile Lys Link et al., 1997
lipase P22088 1-364 peptide-Pro44+Ala-peptide P NT Ala Thr Ala Pro Ala Ala Gly Tyr Joergensen et al., 1991
lipase 1 P40601 1-645 peptide-Ala24+Tyr-peptide P NT Asn Ala His Ala Tyr Asn Asn Leu Wang & Dowds, 1993
lipopolysaccharide export system protein lptA P0ADV1 1-185 peptide-Ala27+Val-peptide P NT Pro Ala Phe Ala Val Thr Gly Asp Link et al., 1997
long-chain fatty acid transport protein P10384 1-446 peptide-Ser25+Ala-peptide P NT Gln Ala Trp Ser Ala Gly Phe Gln Black 1991
Long-chain fatty acid transport protein precursor Q8ZNA5 1-435 peptide-Ser25+Ala-peptide P MS Gln Ala Trp Ser Ala Gly Phe Gln Adkins et al., 2006
LPS-assembly protein P31554 1-784 peptide-Ala24+Ala-peptide P NT Gln Gly Leu Ala Ala Asp Leu Ala Link et al., 1997
Lys5-Leu10-Y(NO2)-Phe-Ser-Ala-Ser-Ala-Leu-Ala-Lys-Ile-Lys-Abz Lys5-Leu10-Y(NO2)-Phe-Ser-Ala-Ser-Ala-Leu-Ala+Lys-Ile-Lys-Abz S Ser Ala Leu Ala Lys Ile Lys Abz Bruton et al., 2003
lysine-arginine-ornithine-binding periplasmic protein P09551 1-260 peptide-Ala22+Ala-peptide P NT Ser Ser Tyr Ala Ala Leu Pro Glu Link et al., 1997
M protein, serotype 12 P19401 1-564 peptide-Ala41+Asp-peptide P NT Thr Val Arg Ala Asp His Ser Asp Kraus et al., 1989
major cell-binding factor Q0P9X8 1-259 peptide-Ala26+Ala-peptide P NT Asn Ala Asn Ala Ala Glu Gly Lys Pei et al., 1991
major cell-surface adhesin PAc P11657 1-1565 peptide-Ala38+Asp-peptide P NT Lys Val Phe Ala Asp Glu Thr Thr Okahashi et al., 1989
major curlin subunit P28307 1-151 peptide-Ala20+Gly-peptide P NT Ser Ala Leu Ala Gly Val Val Pro Collinson et al., 1991
major fimbrial subunit Q04681 1-184 peptide-Ala22+Glu-peptide P NT Val Ala Thr Ala Glu Asn Glu Thr Bahrani et al., 1993
major fimbrial subunit P14212 1-213 peptide-Ala20+Asp-peptide P NT Asn Val Gln Ala Asp Ile Asn Thr van et al., 1989
major MR/P fimbria protein Q03011 1-175 peptide-Ala23+Ala-peptide P NT Ser Ala Leu Ala Ala Asp Gln Gly Bahrani & Mobley, 1993
major outer membrane porin, serovar L2 P06597 1-394 peptide-Ala22+Leu-peptide P NT Ser Leu Gln Ala Leu Pro Val Gly
major outer membrane protein P80672 1-424 peptide-Ala22+Thr-peptide P NT Ala Ala Asn Ala Thr Pro Leu Glu Bolla et al., 1995
major surface antigen 4 Q07408 1-282 peptide-Ala29+Ser-peptide P NT Ala Val Val Ala Ser Pro Met Ser Oberle & Barbet, 1993
maltose-binding periplasmic protein P0AEX9 1-396 peptide-Ala26+Lys-peptide P NT Ser Ala Leu Ala Lys Ile Glu Glu Wilkins et al., 1998
Maltose-binding periplasmic protein precursor P19576 1-396 peptide-Ala26+Lys-peptide P MS Pro Ala Leu Ala Lys Ile Glu Glu Adkins et al., 2006
membrane-associated protein uidC Q47706 1-421 peptide-Ala23+Ala-peptide P NT Ser Ala Tyr Ala Ala Gln Leu Ala Liang et al., 2005
metal-binding protein smbP Q82S91 1-117 peptide-Ala24+Ser-peptide P NT Gln Val Tyr Ala Ser Gly His Thr Barney et al., 2004
metal-binding protein yodA P76344 1-216 peptide-Ser23+His-peptide P NT Pro Ala Phe Ser His Gly His His Ferianc et al., 1998
methanol dehydrogenase subunit 1 P16027 1-626 peptide-Ala27+Asn-peptide P NT Gly Ala Tyr Ala Asn Asp Lys Leu Nunn et al., 1989
methanol dehydrogenase subunit 1 P12293 1-631 peptide-Ala32+Asn-peptide P NT Pro Ala Thr Ala Asn Asp Gln Leu Harms et al., 1987
methylamine dehydrogenase light chain P00372 1-186 peptide-Ala57+Ala-peptide P NT Arg Ala Asn Ala Ala Glu Ser Ala Ishii et al., 1983
microcin E492 Q9Z4N4 1-99 peptide-Ala15+Gly-peptide P NT Ala Phe Gly Ala Gly Glu Thr Asp
MltA-interacting protein P0A908 1-248 peptide-Ala22+Glu-peptide P NT Val Ala His Ala Glu Gly Lys Phe Vollmer et al., 1999
molybdate-binding periplasmic protein P37329 1-257 peptide-Ala24+Asp-peptide P NT Asn Ala Leu Ala Asp Glu Gly Lys Rech et al., 1996
molybdate-binding periplasmic protein P45323 1-254 peptide-Ala24+Lys-peptide P NT Ala Ala Ser Ala Lys Val Thr Val Langen et al., 2000
murein endopeptidase P0C0T5 1-274 peptide-Ala19+Ala-peptide P NT Ala Ser Leu Ala Ala Thr Pro Trp Keck et al., 1990
murein-DD-endopeptidase P0AFI5 1-310 peptide-Ala25+Lys-peptide P NT Gln Ala Val Ala Lys Thr Ala Ala Henderson et al., 1995
N-acetylmuramoyl-L-alanine amidase AmiB precursor P26366 1-439 peptide-Ala22+Ala-peptide P MS Gln Ala Gly Ala Ala Ser Leu Ser Adkins et al., 2006
N-acetylneuraminate epimerase P44544 1-375 peptide-Ala22+Gln-peptide P NT Ser Ala Asn Ala Gln Thr Tyr Pro Langen et al., 2000
nitrous-oxide reductase Q51705 1-652 peptide-Ala57+Ala-peptide P NT Ala Ala Leu Ala Ala Ser Gly Asp Haltia et al., 2003
non-fimbrial adhesin 1 P46739 1-184 peptide-Ala28+Asp-peptide P NT Leu Ala Ile Ala Asp Ala Asn Gly Ahrens et al., 1993
Non-specific acid phosphatase precursor P26976 1-250 peptide-Ala20+Glu-peptide P MS Tyr Thr Ser Ala Glu Thr Val Gln Adkins et al., 2006
Nucleoside-specific channel-forming protein tsx precursor P0A261 1-287 peptide-Ala22+Ala-peptide P MS Thr Ala Asn Ala Ala Glu Asn Asp Adkins et al., 2006
OmpP peptidase P34210 1-315 peptide-Ala23+Ser-peptide P NT Glu Ala Ser Ala Ser Asp Phe Phe Kaufmann et al., 1994
omptin P09169 1-317 peptide-Ala20+Ser-peptide P NT Ser Ser Phe Ala Ser Thr Glu Thr Kramer et al., 2000
osmotically-inducible protein Y P0AFH8 1-201 peptide-Ala28+Glu-peptide P NT Ser Ala Tyr Ala Glu Asn Asn Ala Wilkins et al., 1998
outer membrane porin F P37726 1-326 peptide-Ala24+Gln-peptide P NT Gly Ala Leu Ala Gln Gly Gln Gly de et al., 1992
outer membrane porin protein BP0840 Q04064 1-385 peptide-Ala20+Glu-peptide P NT Ala Ala Gln Ala Glu Thr Ser Val Li et al., 1991
Outer membrane porin protein ompD precursor P37592 1-362 peptide-Ala21+Ala-peptide P MS Val Val Asn Ala Ala Glu Val Tyr Adkins et al., 2006
outer membrane protein 26 Q57483 1-197 peptide-Ala23+Glu-peptide P NT Tyr Ala Ser Ala Glu Glu Lys Ile Langen et al., 2000
outer membrane protein 40 Q9S3R8 1-380 peptide-Ala21+Gln-peptide P NT Ser Ala Thr Ala Gln Glu Ala Thr Veith et al., 2001
outer membrane protein 41 Q9S3R9 1-391 peptide-Ala20+Gln-peptide P NT Asn Ala Ser Ala Gln Glu Asn Thr Veith et al., 2001
outer membrane protein A P38399 1-353 peptide-Ala21+Ala-peptide P NT Val Ala Gln Ala Ala Pro Lys Asp Zhang et al., 1989
outer membrane protein A P0A910 1-346 peptide-Ala21+Ala-peptide P NT Val Ala Gln Ala Ala Pro Lys Asp Molloy et al., 1998 17729
Outer membrane protein A precursor P02936 1-350 peptide-Ala21+Ala-peptide P MS Val Ala Gln Ala Ala Pro Lys Asp Adkins et al., 2006
outer membrane protein assembly factor yaeT P0A940 1-810 peptide-Gly20+Ala-peptide P NT Thr Val Tyr Gly Ala Glu Gly Phe Link et al., 1997
Outer membrane protein assembly factor yaeT precursor Q8ZRP0 1-804 peptide-Gly20+Ala-peptide P MS Thr Val Tyr Gly Ala Glu Gly Phe Adkins et al., 2006
outer membrane protein C P06996 1-367 peptide-Ala21+Ala-peptide P NT Ala Ala Asn Ala Ala Glu Val Tyr Molloy et al., 1998
Outer membrane protein C precursor P0A263 1-378 peptide-Ala21+Ala-peptide P MS Ala Ala Asn Ala Ala Glu Ile Tyr Adkins et al., 2006
outer membrane protein F P02931 1-362 peptide-Ala22+Ala-peptide P NT Thr Ala Asn Ala Ala Glu Ile Tyr Molloy et al., 1998
outer membrane protein G P76045 1-301 peptide-Ala21+Glu-peptide P NT Cys Ala Gln Ala Glu Glu Arg Asn Fajardo et al., 1998
outer membrane protein icsA Q7BCK4 1-1102 peptide-Ala52+Thr-peptide P NT Ile Ala Phe Ala Thr Pro Leu Ser Goldberg et al., 1993
outer membrane protein MIP Q70YI1 1-233 peptide-Ala20+Ala-peptide P NT Thr Ala Met Ala Ala Thr Asp Ala Engleberg et al., 1989
outer membrane protein N P77747 1-377 peptide-Ala21+Ala-peptide P NT Ala Ala His Ala Ala Glu Val Tyr Prilipov et al., 1998
outer membrane protein ompV P06111 1-257 peptide-Ala19+Ala-peptide P NT Asn Ala Leu Ala Ala Gln Thr Tyr Pohlner et al., 1986
outer membrane protein P.68 Q03035 1-916 peptide-Ala37+Asp-peptide P NT Ala Ala His Ala Asp Trp Asn Asn Li et al., 1992
outer membrane protein P5 P38368 1-353 peptide-Ala21+Ala-peptide P NT Val Ala Gln Ala Ala Pro Gln Glu Munson et al., 1993
outer membrane protein tolC P02930 1-493 peptide-Ala22+Glu-peptide P NT Leu Ser Gln Ala Glu Asn Leu Met Molloy et al., 1998
outer membrane protein W P0A915 1-212 peptide-Ala21+His-peptide P NT Ser Ala Phe Ala His Glu Ala Gly Molloy et al., 1998
Outer membrane protein W precursor Q8ZP50 1-212 peptide-Ala21+His-peptide P MS Ser Ala Phe Ala His Glu Ala Gly Adkins et al., 2006
outer membrane protein X P0A917 1-171 peptide-Ala23+Ala-peptide P NT Thr Ser Val Ala Ala Thr Ser Thr Molloy et al., 1998
outer membrane usher protein htrE P33129 1-865 peptide-Ser29+Ala-peptide P NT Thr Ala Phe Ser Ala Glu Leu Val
outer-membrane lipoprotein carrier protein P61316 1-203 peptide-Ala21+Asp-peptide P NT Ser Val Trp Ala Asp Ala Ala Ser Link et al., 1997
Outer-membrane lipoprotein carrier protein precursor Q8ZQD4 1-203 peptide-Ala21+Asp-peptide P MS Ser Val Trp Ala Asp Ala Ala Ser Adkins et al., 2006
penicillin G acylase subunit beta P06875 1-846 peptide-Ala26+Glu-peptide P NT Pro Ala Leu Ala Glu Gln Ser Ser Slade et al., 1991
penicillin-binding protein 5-type peptidase P0AEB2 1-403 peptide-Ala29+Asp-peptide P NT Ala Ala His Ala Asp Asp Leu Asn Waxman et al., 1982
Peptide transport periplasmic protein sapA precursor P36634 1-549 peptide-Ala21+Ala-peptide P MS Gln Ala Thr Ala Ala Thr Ala Pro Adkins et al., 2006
peptidyl-prolyl cis-trans isomerase A P0AFL3 1-190 peptide-Ala24+Ala-peptide P NT Ala Ala Met Ala Ala Lys Gly Asp Liu & Walsh, 1990
Peptidyl-prolyl cis-trans isomerase A precursor P20753 1-190 peptide-Ala24+Ala-peptide P MS Ala Ala Leu Ala Ala Lys Gly Asp Adkins et al., 2006
Periplasmic beta-glucosidase precursor Q56078 1-765 peptide-Ala20+Glu-peptide P MS Pro Ala Leu Ala Glu Asn Leu Phe Adkins et al., 2006
periplasmic dipeptide transport protein P23847 1-535 peptide-Ala28+Lys-peptide P NT Ser Val Gln Ala Lys Thr Leu Val Wilkins et al., 1998
periplasmic murein peptide-binding protein P77348 1-537 peptide-Ala22+Ala-peptide P NT Leu Ser Tyr Ala Ala Glu Val Pro Park et al., 1998
periplasmic nitrate reductase P33937 1-828 peptide-Gln36+Glu-peptide P NT Val Gly Gln Gln Glu Ala Ile Lys Thomas et al., 1999
periplasmic oligopeptide-binding protein P23843 1-543 peptide-Ala26+Ala-peptide P NT Val Ala Leu Ala Ala Asp Val Pro Wilkins et al., 1998
Periplasmic oligopeptide-binding protein precursor P06202 1-543 peptide-Ala26+Ala-peptide P MS Ala Ala Thr Ala Ala Asp Val Pro Adkins et al., 2006
periplasmic protein torT P38683 1-342 peptide-Ser18+Ala-peptide P NT Pro Ala Phe Ser Ala Asp Asn Leu Jourlin et al., 1996
periplasmic trehalase P13482 1-565 peptide-Ala30+Glu-peptide P NT Ser Val Gln Ala Glu Glu Thr Pro Gutierrez et al., 1989
Periplasmic trehalase precursor Q8ZP20 1-570 peptide-Ala34+Ala-peptide P MS Ser Ala Thr Ala Ala Asp Pro Ser Adkins et al., 2006
phage shock protein E P23857 1-104 peptide-Ala19+Ala-peptide P NT Pro Val Phe Ala Ala Glu His Trp Wasinger & Humphery-Smith, 1998
Phe-Ser-Ala-Ser-Ala-Leu-Ala-Lys-Ile Phe-Ser-Ala-Ser-Ala-Leu-Ala+Lys-Ile N Ser Ala Leu Ala Lys Ile - - Dalbey, 2004
phosphate-binding protein pstS P0AG82 1-346 peptide-Ala25+Glu-peptide P NT Ser Val Phe Ala Glu Ala Ser Leu Link et al., 1997
phospholipase A1 P0A921 1-289 peptide-Ala20+Gln-peptide P NT Ala Val Tyr Ala Gln Glu Ala Thr Dekker et al., 1995
Phospholipase A1 precursor P0A231 1-289 peptide-Ala20+Gln-peptide P MS Ala Ala Tyr Ala Gln Glu Ala Thr Adkins et al., 2006
Pic peptidase Q7BS42 1-1372 peptide-Ala55+Gly-peptide P NT Ile Ser Gln Ala Gly Ile Val Arg Henderson et al., 1999
porin ompL P76773 1-230 peptide-Ala20+Gly-peptide P NT Ser Val Phe Ala Gly Ala Tyr Val Dartigalongue et al., 2000
porin-like protein H P29739 1-326 peptide-Ala19+Gly-peptide P NT Ser Ala Asn Ala Gly Ile Asn Leu Bartlett et al., 1989
primary amine oxidase P46883 1-757 peptide-Ala30+His-peptide P NT Pro Val Phe Ala His Gly Gly Glu Hanlon et al., 1997
probable aminopeptidase Q9HZQ8 1-536 peptide-Ala24+Ala-peptide P NT Ala Ser Leu Ala Ala Pro Ser Glu Sarnovsky et al., 2009
probable copper-binding protein pcoE Q47459 1-144 peptide-Ala20+Ala-peptide P NT Ser Ala Met Ala Ala Glu Thr Met Gupta et al., 1999
probable L-asparaginase periplasmic P43843 1-349 peptide-Ala21+Ala-peptide P NT Ile Ala Asn Ala Ala Asp Leu Pro Langen et al., 2000
probable outer membrane protein pmpF P38008 1-1034 peptide-Ala25+Asn-peptide P NT Ile Leu Gln Ala Asn Glu Thr Asp
probable tonB-dependent receptor bfrD P81549 1-743 peptide-Ala30+Ala-peptide P NT Ala Ala Gln Ala Ala Ser Thr Ala Passerini et al., 1999
Protease do precursor P26982 1-475 peptide-Ala26+Ala-peptide P MS Ser Ala Thr Ala Ala Glu Thr Ser Adkins et al., 2006
protein cexE A2TJI4 1-120 peptide-Ala19+Gly-peptide P NT Ser Ala Ile Ala Gly Gly Gly Asn Pilonieta et al., 2007
protein erfK/srfK P39176 1-310 peptide-Ala21+Val-peptide P NT Thr Ser Leu Ala Val Thr Tyr Pro Link et al., 1997
protein fimH P08191 1-300 peptide-Ser21+Phe-peptide P NT Asn Ala Trp Ser Phe Ala Cys Lys Hanson et al., 1988
protein hdeB P0AET2 1-108 peptide-Ala29+Ala-peptide P NT Ser Ala Leu Ala Ala Asn Glu Ser Wasinger & Humphery-Smith, 1998
protein sufI P26648 1-470 peptide-Ala27+Ala-peptide P NT Lys Ala Ser Ala Ala Gly Gln Gln Link et al., 1997
protein tolB P0A855 1-430 peptide-Ala21+Glu-peptide P NT Val Leu His Ala Glu Val Arg Ile
Protein tolB precursor Q8ZQT5 1-430 peptide-Ala21+Glu-peptide P MS Val Leu His Ala Glu Val Arg Ile Adkins et al., 2006
protein yceI P0A8X2 1-191 peptide-Ala22+Ala-peptide P NT Ser Ala Val Ala Ala Asp Tyr Lys Link et al., 1997
Protein yceI precursor P61351 1-191 peptide-Ala22+Ala-peptide P MS Ser Ala Val Ala Ala Glu Tyr Lys Adkins et al., 2006
protein yebF P33219 1-118 peptide-Ala21+Ala-peptide P NT Ser Val Phe Ala Ala Asn Asn Glu Zhang et al., 2006
protein yfdX P76520 1-211 peptide-Ala21+Ala-peptide P NT Thr Val Trp Ala Ala Asp Asn Ala Nishino & Yamaguchi, 2001
protein ygiW P0ADU5 1-130 peptide-Ala20+Ala-peptide P NT Pro Val Met Ala Ala Glu Gln Gly Link et al., 1997
protein yhjJ P37648 1-498 peptide-Ala24+Asp-peptide P NT Tyr Val Gln Ala Asp Ala Leu Gln Link et al., 1997
putative endo-beta-N-acetylglucosaminidase P59206 1-702 peptide-Ala23+Ser-peptide P NT Gly Ala Met Ala Ser Asp Gly Thr Garcia et al., 1999
putrescine-binding periplasmic protein P31133 1-370 peptide-Ala26+Ala-peptide P NT Gly Thr Leu Ala Ala Glu Gln Lys Link et al., 1997
quinohaemoprotein ethanol dehydrogenase type-1 Q46444 1-708 peptide-Gln31+Thr-peptide P NT Ala Phe Ala Gln Thr Gly Pro Ala de et al., 1996
quinone-reactive Ni/Fe-hydrogenase small chain P31884 1-354 peptide-Ala36+Ala-peptide P NT Thr Ala Lys Ala Ala Glu Leu Ala Dross et al., 1992
ribonuclease I P21338 1-268 peptide-Ala23+Leu-peptide P NT Ser Ala Asn Ala Leu Ala Leu Gln Meador & Kennell, 1990
Ribose import binding protein RbsB P02925 1-296 peptide-Ala25+Lys-peptide N MS Asn Ala Met Ala Lys Asp Thr Ile Biniossek et al., 2016
Ribose import binding protein RbsB P02925 1-296 peptide-Ala25+Lys-peptide N MS Asn Ala Met Ala Lys Asp Thr Ile Biniossek et al., 2016
ruminococcin-A P83674 1-47 peptide-Gly23+Gly-peptide P NT Ile Leu Gly Gly Gly Asn Gly Val Dabard et al., 2001
S-layer protein P35823 1-502 peptide-Ala21+Asp-peptide P NT Pro Ala Phe Ala Asp Val Val Ile Phipps et al., 1983
SepA peptidase Q8VSL2 1-1364 peptide-Ser56+Ala-peptide P NT Pro Ala Leu Ser Ala Thr Val Ser Benjelloun-Touimi et al., 1995
serine protease pet O68900 1-1295 peptide-Ala52+Ala-peptide P NT Ile Ile Tyr Ala Ala Asn Met Asp Eslava et al., 1998
serine protease sat Q8FDW4 1-1295 peptide-Ala49+Ala-peptide P NT Thr Val Asn Ala Ala Asn Ile Asp Guyer et al., 2000
silver-binding protein silE Q9Z4N3 1-143 peptide-Ala20+Thr-peptide P NT Ser Ala Trp Ala Thr Glu Thr Val Gupta et al., 1999
sn-glycerol-3-phosphate-binding periplasmic protein ugpB (Precursor) Q7CPK0 1-438 peptide-Ala23+Val-peptide P MS Gln Ala Leu Ala Val Thr Thr Ile Adkins et al., 2006
soluble cytochrome b562 P0ABE7 1-128 peptide-Ala22+Ala-peptide P NT Ala Ser Phe Ala Ala Asp Leu Glu Itagaki & Hager, 1968
Soluble cytochrome b562 precursor P63727 1-128 peptide-Ala22+Ala-peptide P MS Ala Val Phe Ala Ala Asp Leu Glu Adkins et al., 2006
soluble lytic murein transglycosylase P0AGC3 1-645 peptide-Ala27+Asp-peptide P NT Val Ala Arg Ala Asp Ser Leu Asp Engel et al., 1991
soluble secreted antigen MPT53 P0A618 1-173 peptide-Ala38+Asp-peptide P NT Ala Val Ala Ala Asp Glu Arg Leu Wiker et al., 1999
spermidine/putrescine-binding periplasmic protein P0AFK9 1-348 peptide-Ala23+Asp-peptide P NT Ala Ala His Ala Asp Asp Asn Asn Link et al., 1997
Spermidine/putrescine-binding periplasmic protein precursor P0A2C7 1-348 peptide-Ala23+Ser-peptide P MS Ala Ala His Ala Ser Asp Asn Asp Adkins et al., 2006
spheroplast protein Y P77754 1-161 peptide-Ala23+Ala-peptide P NT Leu Ala His Ala Ala Asp Thr Thr Noll et al., 1998
streptopain P0C0J0 1-398 peptide-Ala27+Asp-peptide P NT Pro Val Phe Ala Asp Gln Asn Phe
sucrose porin P22340 1-505 peptide-Ala22+Gln-peptide P NT Ser Ala His Ala Gln Thr Asp Ile Hardesty et al., 1991
sulfate-binding protein P02906 1-329 peptide-Ala19+Lys-peptide P NT Ser Ile Leu Ala Lys Asp Ile Gln Isihara & Hogg, 1980
sulfate-binding protein P0AG78 1-329 peptide-Ala19+Lys-peptide P NT Ser Val Met Ala Lys Asp Ile Gln Quadroni et al., 1996
superoxide dismutase [Cu-Zn] P15453 1-173 peptide-Ala19+Glu-peptide P NT Pro Ala Phe Ala Glu Ser Thr Thr Beck et al., 1990
superoxide dismutase [Cu-Zn] P0AGD1 1-173 peptide-Ala19+Ala-peptide P NT Gly Ala Gln Ala Ala Ser Glu Lys Imlay & Imlay, 1996
Superoxide dismutase [Cu-Zn] 2 precursor O68901 1-173 peptide-Ala19+Ala-peptide P MS Gly Ala Gln Ala Ala Ser Glu Lys Adkins et al., 2006
Tail-specific protease precursor P43669 1-682 peptide-Ala22+Val-peptide P MS Gln Ser Phe Ala Val Glu Asp Ile Adkins et al., 2006
tetraheme cytochrome c-type O33731 1-111 peptide-Ala25+Ala-peptide P NT Ala Ser Phe Ala Ala Asp Glu Thr Gordon et al., 2000
thermolabile hemolysin Q99289 1-418 peptide-Val19+Ala-peptide P NT Ala Ser Ala Val Ala Glu Glu Pro Shinoda et al., 1991
thermostable direct hemolysin 2 P19250 1-189 peptide-Ala24+Phe-peptide P NT Lys Thr Phe Ala Phe Glu Leu Pro Tsunasawa et al., 1987
thiol:disulfide interchange protein dsbA P0AEG4 1-208 peptide-Ala19+Ala-peptide P NT Ser Ala Ser Ala Ala Gln Tyr Glu Wilkins et al., 1998
thiol:disulfide interchange protein dsbC P0AEG6 1-236 peptide-Ala20+Asp-peptide P NT Phe Ala Gln Ala Asp Asp Ala Ala Link et al., 1997
Thiol:disulfide interchange protein dsbC precursor P55890 1-237 peptide-Ala21+Asp-peptide P MS Val Ala His Ala Asp Asp Ala Ala Adkins et al., 2006
thiol:disulfide interchange protein dsbD P36655 1-565 peptide-Ala19+Gly-peptide P NT Ser Val Phe Ala Gly Leu Phe Asp Chung et al., 2000
thiol:disulfide interchange protein dsbG P77202 1-248 peptide-Ala17+Glu-peptide P NT Ile Ala Phe Ala Glu Glu Leu Pro van et al., 1998
Thiosulfate reductase precursor P37600 1-758 peptide-Ala30+Arg-peptide P MS Gly Ala Leu Ala Arg Asn Pro Ile Adkins et al., 2006
Thiosulfate sulfurtransferase PspE P23857 20-104 peptide-Ala19+Ala-peptide N MS Pro Val Phe Ala Ala Glu His Trp Biniossek et al., 2016
Thiosulfate sulfurtransferase PspE P23857 20-104 peptide-Ala19+Ala-peptide N MS Pro Val Phe Ala Ala Glu His Trp Biniossek et al., 2016
thiosulfate-binding protein P16700 1-338 peptide-Ala25+Thr-peptide P NT His Val Gln Ala Thr Glu Leu Leu Link et al., 1997
Thiosulfate-binding protein precursor P41031 1-338 peptide-Ala25+Thr-peptide P MS Gln Ala Gln Ala Thr Glu Leu Leu Adkins et al., 2006
TPR repeat-containing protein yfgC precursor P66950 1-487 peptide-Ala27+Asp-peptide P MS Pro Ala Phe Ala Asp Pro Ala Asp Adkins et al., 2006
trimethylamine-N-oxide reductase 1 P33225 1-848 peptide-Ala39+Ala-peptide P NT Arg Ala Thr Ala Ala Gln Ala Ala Mejean et al., 1994
trimethylamine-N-oxide reductase 2 P46923 1-809 peptide-Ala31+Glu-peptide P NT Pro Ala Trp Ala Glu Glu Lys Gly Gon et al., 2000
Tsh peptidase Q47692 1-1377 peptide-Ala52+Gly-peptide P NT Gly Ser Leu Ala Gly Thr Val Asn Stathopoulos et al., 1999
type-1 fimbrial protein, A chain P37921 1-185 peptide-Ala22+Ala-peptide P NT Ala Ala Val Ala Ala Asp Pro Thr
uncharacterized periplasmic iron-binding protein HI0362 Q57449 1-293 peptide-Ala22+Lys-peptide P NT Gln Ala Asn Ala Lys Phe Lys Val Harkness et al., 1992
uncharacterized protein HI0246 P43972 1-148 peptide-Ala20+Lys-peptide P NT Ser Ala Cys Ala Lys Asp Ala Pro Langen et al., 2000
uncharacterized protein HI1624 P44276 1-227 peptide-Ala21+His-peptide P NT Val Ala Asn Ala His Asn Val Trp Langen et al., 2000
Uncharacterized protein ybgS precursor P64437 1-128 peptide-Ala24+Ala-peptide P MS Ala Ala Leu Ala Ala Glu Ser Asn Adkins et al., 2006
uncharacterized protein ybiS P0AAX8 1-306 peptide-Ala24+Val-peptide P NT Thr Ala Ser Ala Val Thr Tyr Pro Link et al., 1997
uncharacterized protein ynfD P76172 1-101 peptide-Ala21+Ala-peptide P NT Ala Val Leu Ala Ala Pro Gly Ser Wasinger & Humphery-Smith, 1998
uncharacterized protein ytfJ P39187 1-184 peptide-Ala20+His-peptide P NT Met Ala Ser Ala His Gln Phe Glu Link et al., 1997
UPF0214 protein yfeW precursor Q8ZN80 1-432 peptide-Ala19+Val-peptide P MS Ser Ala Phe Ala Val Glu Tyr Pro Adkins et al., 2006
UPF0482 protein ynfB precursor Q7CQJ7 1-113 peptide-Ala28+Glu-peptide P MS Ser Ala Phe Ala Glu Thr Ser Lys Adkins et al., 2006
Uptake hydrogenase small subunit P21950 1-358 peptide-Ala45+Met-peptide P NT Ile Ala His Ala Met Glu Thr Lys Menon et al., 1990
vacuolating cytotoxin Q48245 1-1287 peptide-Ala33+Ala-peptide P NT Gln Ser His Ala Ala Phe Phe Thr Cover & Blaser, 1992
Virulence membrane protein pagC precursor P23988 1-185 peptide-Ala23+Asp-peptide P MS Val Ala Gln Ala Asp Thr Asn Ala Adkins et al., 2006
vitamin B12 transporter btuB P06129 1-614 peptide-Ala20+Gln-peptide P NT Ser Ala Trp Ala Gln Asp Thr Ser Link et al., 1997
Vitamin B12 transporter BtuB precursor P37409 1-614 peptide-Ala20+Gln-peptide P MS Ser Ala Trp Ala Gln Asp Thr Ser Adkins et al., 2006
Y(NO2)-Phe-Ser-Ala-Ser-Ala-Leu-Ala-Lys-Ile-Lys-Abz Y(NO2)-Phe-Ser-Ala-Ser-Ala-Leu-Ala+Lys-Ile-Lys-Abz S Ser Ala Leu Ala Lys Ile Lys Abz Bruton et al., 2003
zinc resistance-associated protein P0AAA9 1-141 peptide-Ala26+His-peptide P NT Ser Ala Phe Ala His Gly Gly His Noll et al., 1998

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