Desulfovibrio sp. 3_1_syn3

Taxonomy
Taxonomy database identifier: 457398
Superkingdom Bacteria
Phylum Proteobacteria
Class Deltaproteobacteria
Order Desulfovibrionales
Family Desulfovibrionaceae
Genus Desulfovibrio
Species sp. 3_1_syn3
Peptidase View peptidase sequences from Desulfovibrio sp. 3_1_syn3
Count of known and putative peptidases: 32, non-peptidase homologues 5
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0401281 lspA HMPREF0326_03084
AE A31 A31.002 HyaD peptidase MER0232035 HMPREF0326_01923
AE A31 unassigned family A31 unassigned peptidases MER0231786 HMPREF0326_01692
CA C93 unassigned family C93 unassigned peptidases MER0392264
CO C40 unassigned family C40 unassigned peptidases MER0237656 HMPREF0326_02398
CO C40 unassigned family C40 unassigned peptidases MER0452970
MA M41 unassigned family M41 unassigned peptidases MER0229790 ftsH HMPREF0326_02257
MA M48 unassigned subfamily M48B unassigned peptidases MER0347699 htpX HMPREF0326_01103
ME M16 M16.012 PreP1 peptidase (Arabidopsis-type) MER0316396 HMPREF0326_01089
ME M16 unassigned subfamily M16B unassigned peptidases MER0390813 HMPREF0326_02033
MF M17 unassigned family M17 unassigned peptidases MER0339866 pepA HMPREF0326_00895
MG M24 unassigned subfamily M24A unassigned peptidases MER0394939 map HMPREF0326_02696
MG M24 unassigned subfamily M24B unassigned peptidases MER0396070 HMPREF0326_00516
MH M18 unassigned family M18 unassigned peptidases MER0341149 HMPREF0326_02214
MH M20 unassigned family M20D unassigned peptidases MER0374449 HMPREF0326_00906
MH M20 unassigned family M20 unassigned peptidases MER0238508 HMPREF0326_01623
MH M20 unassigned family M20 unassigned peptidases MER0233400 HMPREF0326_01626
MH M20 unassigned family M20 unassigned peptidases MER0370311 HMPREF0326_02493
MO M23 M23.009 Mername-AA292 peptidase MER0387178 HMPREF0326_00723
MO M23 unassigned subfamily M23B unassigned peptidases MER0388791 HMPREF0326_00202
MO M23 unassigned subfamily M23B unassigned peptidases MER0388302 HMPREF0326_01327
MO M23 unassigned subfamily M23B unassigned peptidases MER0389539 HMPREF0326_01405
MO M23 unassigned subfamily M23B unassigned peptidases MER0387605 HMPREF0326_01594
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0405852
PA S1 S01.453 MucD peptidase MER0407202
PA S1 unassigned subfamily S1C unassigned peptidases MER0407591
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0454665
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0456390
PB C44 unassigned family C44 unassigned peptidases MER0459564
PB C44 unassigned family C44 unassigned peptidases MER0459565
PB C45 unassigned family C45 unassigned peptidases MER0305971 HMPREF0326_01209
PB T1 T01.007 CodW component of CodWX peptidase MER0437828
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0379208 HMPREF0326_03049
PC C26 C26.964 CTP synthetase MER0448537
PC C26 C26.A07 At1g63660 (Arabidopsis thaliana) MER0443059
PC C26 C26.A25 trp1 (Schizosaccharomyces pombe) MER0439466
PC C26 C26.A32 imidazoleglycerol-phosphate synthase (Pyrococcus furiosus) MER0451847
PC C26 unassigned family C26 unassigned peptidases MER0446742
PC C26 unassigned family C26 unassigned peptidases MER0442548
PC C56 C56.A06 DDB_G0276405 (Dictyostelium discoideum) MER0280464 HMPREF0326_01860
PE T5 unassigned family T5 unassigned peptidases MER0307756 argJ HMPREF0326_01101
SE S11 unassigned family S11 unassigned peptidases MER0351613 HMPREF0326_00365
SE S11 unassigned family S11 unassigned peptidases MER0351297 HMPREF0326_01767
SF S24 S24.003 UmuD protein MER0375480 HMPREF0326_02189
SF S26 S26.014 TraF peptidase MER0280582 HMPREF0326_02657
SF S26 S26.025 signal peptidase sipX MER0246622 HMPREF0326_00377
SJ S16 S16.001 Lon-A peptidase MER0360680 lon HMPREF0326_01896
SJ S16 S16.001 Lon-A peptidase MER0360510 lon HMPREF0326_02684
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0474355
SJ S16 unassigned family S16 unassigned peptidases MER0361636 HMPREF0326_01359
SK S14 S14.001 peptidase Clp (type 1) MER0358262 clpP HMPREF0326_02686
SK S41 S41.004 C-terminal processing peptidase-3 MER0337493 HMPREF0326_02884
SK S49 S49.003 protein C (bacteriophage lambda) MER0237615 HMPREF0326_01532
SK S49 unassigned subfamily S49B unassigned peptidases MER1354478
U- U32 unassigned family U32 unassigned peptidases MER0404165

GENOME ANALYSIS: Comparison with 19 completely sequenced genomes from genus Desulfovibrio
Family Comment
M48 significant decrease in homologues (1 homologues)
S24 significant decrease in homologues (1 homologues)