Clostridium ramosum

Taxonomy
Taxonomy database identifier: 1547
Superkingdom Bacteria
Phylum Firmicutes
Class Clostridia
Order Clostridiales
Family Clostridiaceae
Genus Clostridium
Species ramosum
Peptidase View peptidase sequences from Clostridium ramosum
Count of known and putative peptidases: 55, non-peptidase homologues 13
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0139270 lspA CLORAM_01341
AD A24 A24.019 ComC peptidase MER0184786 CLORAM_01010
AE A25 non-peptidase homologue family A25 non-peptidase homologues MER0125287 CLORAM_01182
CA C39 unassigned family C39 unassigned peptidases MER0141980 CLORAM_01158
CL C60 C60.002 sortase B MER0139572 CLORAM_03121
CL C82 unassigned subfamily C82A unassigned peptidases MER0140056 CLORAM_01000
CL C82 unassigned subfamily C82A unassigned peptidases MER0174164 CLORAM_00601
CO C40 unassigned family C40 unassigned peptidases MER0141615 CLORAM_01555
CO C40 unassigned family C40 unassigned peptidases MER0141124 CLORAM_00588
CO C40 unassigned family C40 unassigned peptidases MER0119304 CLORAM_02604
CO C40 unassigned family C40 unassigned peptidases MER0453777
CO C40 unassigned family C40 unassigned peptidases MER0453778
MA M3 unassigned subfamily M3B unassigned peptidases MER0142075 CLORAM_02221
MA M3 unassigned subfamily M3B unassigned peptidases MER0143264 CLORAM_01180
MA M3 unassigned family M3 unassigned peptidases MER0199182 CLORAM_01881
MA M41 M41.009 FtsH-2 peptidase MER0122517 ftsH CLORAM_00353
MA M64 M64.001 IgA peptidase (Clostridium ramosum-type) MER0016067 iga
MD M15 non-peptidase homologue family M15 non-peptidase homologues MER0125769 CLORAM_01349
MD M15 unassigned subfamily M15B unassigned peptidases MER0138392 CLORAM_02780
MD M15 unassigned subfamily M15B unassigned peptidases MER0118380 CLORAM_02783
MD M15 unassigned subfamily M15B unassigned peptidases MER0118090 CLORAM_00338
MD M15 unassigned subfamily M15B unassigned peptidases MER0142346 CLORAM_00804
MD M15 unassigned subfamily M15B unassigned peptidases MER0117756 CLORAM_01715
ME M16 M16.A20 ymfH g.p. (Bacillus subtilis) MER0392862 CLORAM_02547
MF M17 unassigned family M17 unassigned peptidases MER0118762 CLORAM_00437
MG M24 unassigned subfamily M24A unassigned peptidases MER0172548 CLORAM_01454
MG M24 unassigned subfamily M24A unassigned peptidases MER0126436 CLORAM_03157
MG M24 unassigned subfamily M24B unassigned peptidases MER0481919 CLORAM_01719
MG M24 unassigned subfamily M24B unassigned peptidases MER0480996
MH M18 unassigned family M18 unassigned peptidases MER0122260 CLORAM_01526
MH M18 unassigned family M18 unassigned peptidases MER0125668 CLORAM_01823
MH M20 unassigned subfamily M20B unassigned peptidases MER0120322 CLORAM_00283
MH M20 unassigned subfamily M20C unassigned peptidases MER0189281 CLORAM_02691
MH M20 unassigned family M20D unassigned peptidases MER0117578 CLORAM_02863
MH M20 unassigned family M20D unassigned peptidases MER0372968 CLORAM_01143
MH M20 unassigned family M20D unassigned peptidases MER0172640 CLORAM_02006
MJ M19 unassigned family M19 unassigned peptidases MER0175210 CLORAM_01711
MM M50 unassigned subfamily M50B unassigned peptidases MER0143968 CLORAM_01378
MQ M29 unassigned family M29 unassigned peptidases MER0141215 CLORAM_02623
PA S1 unassigned subfamily S1E unassigned peptidases MER0407054
PA S55 S55.001 SpoIVB peptidase MER0126236 CLORAM_02502
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0125964 CLORAM_02520
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0458904 CLORAM_01577
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0458902 CLORAM_01478
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0172763 CLORAM_02149
PB C44 unassigned family C44 unassigned peptidases MER0458903 CLORAM_01539
PB C59 unassigned family C59 unassigned peptidases MER0144394 CLORAM_02105
PB T2 unassigned family T2 unassigned peptidases MER0158971 CLORAM_00730
PC C26 C26.959 TRP3 protein MER0436059
PC C26 C26.964 CTP synthetase MER0447131 CLORAM_01562
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0444462
PC C26 unassigned family C26 unassigned peptidases MER0439900 CLORAM_01587
PC C26 unassigned family C26 unassigned peptidases MER0442263
PC C26 unassigned family C26 unassigned peptidases MER0444857
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0186217 CLORAM_00777
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0186218 CLORAM_00778
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0124635 CLORAM_02024
PE T5 T05.002 ArgJ protein (archea) MER0126752 argJ CLORAM_00984
SB S8 unassigned subfamily S8A unassigned peptidases MER0122825 CLORAM_03032
SC S9 S09.B04 BSU23640 g.p. (Bacillus subtilis) MER0477330
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0209740 CLORAM_01466
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0210622 CLORAM_01532
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0209481 CLORAM_02137
SC S9 unassigned family S9 unassigned peptidases MER0210322
SC S9 unassigned family S9 unassigned peptidases MER0212882 CLORAM_01022
SC S9 unassigned family S9 unassigned peptidases MER0210811 CLORAM_01880
SE S11 S11.004 K15-type DD-transpeptidase MER0175344 CLORAM_02169
SE S11 S11.005 D-Ala-D-Ala carboxypeptidase DacF MER0140247 CLORAM_01202
SE S11 unassigned family S11 unassigned peptidases MER0124966 CLORAM_01271
SF S24 S24.001 repressor LexA MER0137537 CLORAM_00915
SF S26 S26.011 signal peptidase SipW (Bacillus-type) MER0267539 CLORAM_02595
SF S26 unassigned subfamily S26A unassigned peptidases MER0246677 CLORAM_01206
SF S26 unassigned subfamily S26A unassigned peptidases MER0246671 CLORAM_01207
SF S26 unassigned subfamily S26A unassigned peptidases MER0246840 CLORAM_02438
SJ S16 S16.001 Lon-A peptidase MER0118004 CLORAM_01363
SK S14 S14.001 peptidase Clp (type 1) MER0358410 CLORAM_02894
SK S41 unassigned subfamily S41A unassigned peptidases MER0140419 CLORAM_00530
U- U32 U32.002 collagenase (Helicobacter-type) MER0125963 CLORAM_02337
U- U32 unassigned family U32 unassigned peptidases MER0325484
U- U57 U57.001 yabG protein (Bacillus-type) MER0123304 CLORAM_00476

GENOME ANALYSIS: Comparison with 96 completely sequenced genomes from genus Clostridium
Family Comment
M17 significant presence (1 homologues)
M64 significant presence (1 homologues)
T2 significant presence (1 homologues)