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Literature for peptidase S53.001: sedolisin

Summary Alignment Tree Sequences Sequence features Distribution Structure Literature Substrates

(Topics flags: S Structure, I Inhibitor, V Review. To select only the references relevant to a single topic, click the link above. See explanation.)

    2018
  1. Wlodawer,A., Li,M., Gustchina,A., Dauter,Z., Uchida,K., Oyama,H., Goldfarb,N.E., Dunn,B.M. and Oda,K.
    Correction to "Inhibitor complexes of the Pseudomonas serine-carboxyl proteinase"
    Biochemistry PubMed  Europe PubMed DOI  S
    2. 2013
  2. Takahashi,K.
    Structure and function studies on enzymes with a catalytic carboxyl group(s): From ribonuclease T1 to carboxyl peptidases
    Proc Jpn Acad Ser B Phys Biol Sci89, 201-225. PubMed  Europe PubMed DOI  V
  3. Yao,J., Xu,Q. and Guo,H.
    QM/MM and free-energy simulations of deacylation reaction catalysed by sedolisin, a serine-carboxyl peptidase
    Mol Simul39, 206-213. DOI
    4. 2012
  4. Oda,K.
    Sedolisin
    [ISSN:978-0-12-407742-3]3, 3331-3337. DOI
    5. 2011
  5. Xu,Q., Yao,J., Wlodawer,A. and Guo,H.
    Clarification of the mechanism of acylation reaction and origin of substrate specificity of the serine-carboxyl peptidase sedolisin through QM/MM free energy simulations
    J Phys Chem B115, 2470-2476. PubMed  Europe PubMed DOI  S
    6. 2006
  6. Bravaya,K., Bochenkova,A., Grigorenko,B., Topol,I., Burt,S. and Nemukhin,A.
    Molecular modeling the reaction mechanism of serine-carboxyl peptidases
    J Chem Theory Comput2, 1168-1175. PubMed  Europe PubMed DOI
  7. [YEAR:10-5-2006]Xu,Q., Guo,H., Wlodawer,A. and Guo,H.
    The importance of dynamics in substrate-assisted catalysis and specificity
    J Am Chem Soc128, 5994-5995. PubMed  Europe PubMed DOI
    8. 2004
  8. Oda,K.
    Sedolisin
    [ISSN:0-12-079610-4]2, 1886-1887.  V
  9. [YEAR:6-2-2004]Wlodawer,A., Li,M., Gustchina,A., Oyama,H., Oda,K., Beyer,B.B., Clemente,J. and Dunn,B.M.
    Two inhibitor molecules bound in the active site of Pseudomonas sedolisin: a model for the bi-product complex following cleavage of a peptide substrate
    Biochem Biophys Res Commun314, 638-645. PubMed  Europe PubMed DOI  I
    10. 2003
  10. Wlodawer,A., Li,M., Gustchina,A., Oyama,H., Dunn,B.M. and Oda,K.
    Structural and enzymatic properties of the sedolisin family of serine-carboxyl peptidases
    Acta Biochim Pol50, 81-102. PubMed  Europe PubMed DOI
    11. 2001
  11. Dauter,Z., Li,M. and Wlodawer,A.
    Practical experience with the use of halides for phasing macromolecular structures: a powerful tool for structural genomics
    Acta Crystallogr D Biol Crystallogr57, 239-249. PubMed  Europe PubMed DOI  S
  12. [YEAR:25-12-2001]Wlodawer,A., Li,M., Gustchina,A., Dauter,Z., Uchida,K., Oyama,H., Goldfarb,N.E., Dunn,B.M. and Oda,K.
    Inhibitor complexes of the Pseudomonas serine-carboxyl proteinase
    Biochemistry40, 15602-15611. PubMed  Europe PubMed DOI  S  I
  13. Wlodawer,A., Li,M., Dauter,Z., Gustchina,A., Uchida,K., Oyama,H., Dunn,B.M. and Oda,K.
    Carboxyl proteinase from Pseudomonas defines a novel family of subtilisin-like enzymes
    Nat Struct Biol8, 442-446. PubMed  Europe PubMed DOI  S
    14. 1999
  14. Ito,M., Narutaki,S., Uchida,K. and Oda,K.
    Identification of carboxyl residues in pepstatin-insensitive carboxyl proteinase from Pseudomonas sp. 101 that participate in catalysis and substrate binding
    J Biochem125, 210-216. PubMed  Europe PubMed  I
  15. Narutaki,S., Dunn,B.M. and Oda,K.
    Subsite preferences of pepstatin-insensitive carboxyl proteinases from bacteria
    J Biochem125, 75-81. PubMed  Europe PubMed  I
  16. [YEAR:24-9-1999]Oyama,H., Abe,S., Ushiyama,S., Takahashi,S. and Oda,K.
    Identification of catalytic residues of pepstatin-insensitive carboxyl proteinases from prokaryotes by site-directed mutagenesis
    J Biol Chem274, 27815-27822. PubMed  Europe PubMed DOI  I
    17. 1998
  17. Oda,K., Takahashi,S., Ito,M. and Dunn,B.M.
    Pepstatin-insensitive carboxyl proteinases from prokaryotes. Catalytic residues and substrate specificities
    Adv Exp Med Biol436, 349-353. PubMed  Europe PubMed  I
    18. 1996
  18. Ito,M., Dunn,B.M. and Oda,K.
    Substrate specificities of pepstatin-insensitive carboxyl proteinases from gram-negative bacteria
    J Biochem120, 845-850. PubMed  Europe PubMed  I
    19. 1995
  19. Hayashi,K., Izu,H., Oda,K., Fukuhara,K., Matsuo,M., Takano,R. and Hara,S.
    The primary structure of pepstatin-insensitive carboxyl proteinase produced by Pseudomonas sp. No. 101
    J Biochem118, 738-744. PubMed  Europe PubMed  I
    20. 1994
  20. [YEAR:21-10-1994]Oda,K., Takahashi,T., Tokuda,Y., Shibano,Y. and Takahashi,S.
    Cloning, nucleotide sequence, and expression of an isovaleryl pepstatin-insensitive carboxyl proteinase gene from Pseudomonas sp. 101
    J Biol Chem269, 26518-26524. PubMed  Europe PubMed  I
    21. 1992
  21. Oda,K., Nakatani,H. and Dunn,B.M.
    Substrate specificity and kinetic properties of pepstatin-insensitive carboxyl proteinase from Pseudomonas sp. No. 101
    Biochim Biophys Acta1120, 208-214. PubMed  Europe PubMed DOI  I
    22. 1987
  22. Oda,K., Sugitani,M., Fukuhara,K. and Murao,S.
    Purification and properties of a pepstatin-insensitive carboxyl proteinase from a Gram-negative bacterium
    Biochim Biophys Acta923, 463-469. PubMed  Europe PubMed  I

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