Literature for peptidase S08.129: Tk-subtilisin

(Topics flags: S Structure, E Expression. To select only the references relevant to a single topic, click the link above. See explanation.)

2021
1. Uehara,R., Dan,N., Amesaka,H., Yoshizawa,T., Koga,Y., Kanaya,S., Takano,K., Matsumura,H. and Tanaka,S.I.
   Insertion loop-mediated folding propagation governs efficient maturation of hyperthermophilic Tk-subtilisin at high temperatures
   FEBS Lett (2021) 595, 452-461. PubMed  Europe PubMed DOI
2020
2. Bahun,M., Hartman,K. and Poklar Ulrih,N.
   Periplasmic production of pernisine in Escherichia coli and determinants for its high thermostability
   Appl Microbiol Biotechnol (2020) PubMed  Europe PubMed DOI
2019
3. Snajder,M., Carrillo Rincon,A.F., Magdevska,V., Bahun,M., Kranjc,L., Pas,M., Juntes,P., Petkovic,H. and Poklar Ulrih,N.
   Extracellular production of the engineered thermostable protease pernisine from Aeropyrum pernix K1 in Streptomyces rimosus
   Microb Cell Fact (2019) 18, 196-196. PubMed  Europe PubMed DOI  PMC  EPMC  E
2015
4. Snajder,M., Mihelic,M., Turk,D. and Ulrih,N.P.
   Codon optimisation is key for pernisine expression in Escherichia coli
   PLoS ONE (2015) 10, e0123288-e0123288. PubMed  Europe PubMed DOI  E
2014
5. Koga,Y., Tanaka,S., Sakudo,A., Tobiume,M., Aranishi,M., Hirata,A., Takano,K., Ikuta,K. and Kanaya,S.
   Proteolysis of abnormal prion protein with a thermostable protease from Thermococcus kodakarensis KOD1
   Appl Microbiol Biotechnol (2014) 98, 2113-2120. PubMed  Europe PubMed DOI
2013
6. Hirata,A., Hori,Y., Koga,Y., Okada,J., Sakudo,A., Ikuta,K., Kanaya,S. and Takano,K.
   Enzymatic activity of a subtilisin homolog, Tk-SP, from Thermococcus kodakarensis in detergents and its ability to degrade the abnormal prion protein
   BMC Biotechnol (2013) 13, 19-19. PubMed  Europe PubMed DOI
7. Uehara,R., Ueda,Y., You,D.J., Koga,Y. and Kanaya,S.
   Accelerated maturation of Tk-subtilisin by a Leu - >Pro mutation at the C-terminus of the propeptide, which reduces the binding of the propeptide to Tk-subtilisin
   FEBS J (2013) 280, 994-1006. PubMed  Europe PubMed DOI
8. Yuzaki,K., Sanda,Y., You,D.J., Uehara,R., Koga,Y. and Kanaya,S.
   Increase in activation rate of Pro-Tk-subtilisin by a single nonpolar-to-polar amino acid substitution at the hydrophobic core of the propeptide domain
   Protein Sci (2013) 22, 1711-1721. PubMed  Europe PubMed DOI
2012
9. Okada,J., Koga,Y., Takano,K. and Kanaya,S.
   Slow unfolding pathway of hyperthermophilic Tk-RNase H2 examined by pulse proteolysis using the stable protease Tk-subtilisin
   Biochemistry (2012) 51, 9178-9191. PubMed  Europe PubMed DOI
10. Sacco,E., Regonesi,M.E. and Vanoni,M.
    Archaean serine proteases
    [ISSN:978-0-12-407742-3] (2012) 3, 3224-3233. DOI
11. Uehara,R., Takeuchi,Y., Tanaka,S., Takano,K., Koga,Y. and Kanaya,S.
    Requirement of Ca(2+) ions for the hyperthermostability of Tk-subtilisin from Thermococcus kodakarensis
    Biochemistry (2012) 51, 5369-5378. PubMed  Europe PubMed DOI
12. Uehara,R., Tanaka,S., Takano,K., Koga,Y. and Kanaya,S.
    Requirement of insertion sequence IS1 for thermal adaptation of Pro-Tk-subtilisin from hyperthermophilic archaeon
    Extremophiles (2012) 16, 841-851. PubMed  Europe PubMed DOI
2011
13. Sinsereekul,N., Foophow,T., Yamanouchi,M., Koga,Y., Takano,K. and Kanaya,S.
    An alternative mature form of subtilisin homologue, Tk-SP, from Thermococcus kodakaraensis identified in the presence of Ca2+
    FEBS J (2011) 278, 1901-1911. PubMed  Europe PubMed DOI
14. Tanaka,S., Koga,Y., Takano,K. and Kanaya,S.
    Inhibition of chymotrypsin- and subtilisin-like serine proteases with Tk-serpin from hyperthermophilic archaeon Thermococcus kodakaraensis
    Biochim Biophys Acta (2011) 1814, 299-307. PubMed  Europe PubMed DOI
2010
15. Foophow,T., Tanaka,S.I., Angkawidjaja,C., Koga,Y., Takano,K. and Kanaya,S.
    Crystal structure of a subtilisin homologue, Tk-SP, from Thermococcus kodakaraensis: requirement of a C-terminal beta-jelly roll domain for hyperstability
    J Mol Biol (2010) 400, 865-877. PubMed  Europe PubMed DOI  S
2009
16. Takeuchi,Y., Tanaka,S., Matsumura,H., Koga,Y., Takano,K. and Kanaya,S.
    Requirement of a unique Ca(2+)-binding loop for folding of Tk-subtilisin from a hyperthermophilic archaeon
    Biochemistry (2009) 48, 10637-10643. PubMed  Europe PubMed DOI
17. Tanaka,S., Matsumura,H., Koga,Y., Takano,K. and Kanaya,S.
    Identification of the interactions critical for propeptide-catalyzed folding of Tk-subtilisin
    J Mol Biol (2009) 394, 306-319. PubMed  Europe PubMed DOI
2008
18. Tanaka,S., Takeuchi,Y., Matsumura,H., Koga,Y., Takano,K. and Kanaya,S.
    Crystal structure of Tk-subtilisin folded without propeptide: requirement of propeptide for acceleration of folding
    FEBS Lett (2008) 582, 3875-3878. PubMed  Europe PubMed DOI  S
2007
19. Pulido,M.A., Koga,Y., Takano,K. and Kanaya,S.
    Directed evolution of Tk-subtilisin from a hyperthermophilic archaeon: identification of a single amino acid substitution responsible for low-temperature adaptation
    Protein Eng Des Sel (2007) 20, 143-153. PubMed  Europe PubMed DOI
20. Pulido,M.A., Tanaka,S., Sringiew,C., You,D.J., Matsumura,H., Koga,Y., Takano,K. and Kanaya,S.
    Requirement of left-handed glycine residue for high stability of the Tk-subtilisin propeptide as revealed by mutational and crystallographic analyses
    J Mol Biol (2007) 374, 1359-1373. PubMed  Europe PubMed DOI
21. Tanaka,S., Matsumura,H., Koga,Y., Takano,K. and Kanaya,S.
    Four new crystal structures of Tk-subtilisin in unautoprocessed, autoprocessed and mature forms: insight into structural changes during maturation
    J Mol Biol (2007) 372, 1055-1069. PubMed  Europe PubMed DOI  S
22. Tanaka,S., Saito,K., Chon,H., Matsumura,H., Koga,Y., Takano,K. and Kanaya,S.
    Crystal structure of unautoprocessed precursor of subtilisin from a hyperthermophilic archaeon: evidence for Ca2+-induced folding
    J Biol Chem (2007) 282, 8246-8255. PubMed  Europe PubMed DOI  S
2006
23. Pulido,M., Saito,K., Tanaka,S., Koga,Y., Morikawa,M., Takano,K. and Kanaya,S.
    Ca2+-Dependent maturation of subtilisin from a hyperthermophilic archaeon, Thermococcus kodakaraensis: the propeptide Is a potent inhibitor of the mature domain but is not required for its folding
    Appl Environ Microbiol (2006) 72, 4154-4162. PubMed  Europe PubMed DOI  PMC  EPMC
24. Tanaka,S., Saito,K., Chon,H., Matsumura,H., Koga,Y., Takano,K. and Kanaya,S.
    Crystallization and preliminary X-ray diffraction study of an active-site mutant of pro-Tk-subtilisin from a hyperthermophilic archaeon
    Acta Crystallogr Sect F Struct Biol Cryst Commun (2006) 62, 902-905. PubMed  Europe PubMed DOI  PMC  EPMC
2003
25. Catara,G., Ruggiero,G., La Cara,F., Digilio,F.A., Capasso,A. and Rossi,M.
    A novel extracellular subtilisin-like protease from the hyperthermophile Aeropyrum pernix K1: biochemical properties, cloning, and expression
    Extremophiles (2003) 7, 391-399. PubMed  Europe PubMed DOI
2001
26. Kannan,Y., Koga,Y., Inoue,Y., Haruki,M., Takagi,M., Imanaka,T., Morikawa,M. and Kanaya,S.
    Active subtilisin-like protease from a hyperthermophilic archaeon in a form with a putative prosequence
    Appl Environ Microbiol (2001) 67, 2445-2452. PubMed  Europe PubMed DOI  PMC  EPMC