Literature for peptidase S07.003: Zika virus NS2B-NS3 peptidase

Summary Alignment Tree Sequences Sequence features Distribution Structure Literature Substrates

(Topics flags: S Structure, A Assay, T Target, P Specificity, E Expression, V Review, I Inhibitor, L Localization. To select only the references relevant to a single topic, click the link above. See explanation.)

    2025
  1. von Delft,F., Ni,X., Richardson,R., Godoy,A., Ferla,M., Kikawa,C., Scheen,J., Hannon,W., Capkin,E., Lahav,N., Balcomb,B., Marples,P., Fairhead,M., Wang,S., Williams,E., Tomlinson,C., Aschenbrenner,J., Lithgo,R., Winokan,M., Giroud,C., Chandran,A., Walsh,M., Thompson,W., Bloom,J., Barr,H., Kirkegaard,K., Koekemoer,L., Fearon,D. and Evans,M.
    Crystallographic fragment screening and deep mutational scanning of Zika virus NS2B-NS3 protease enable development of resistance-resilient inhibitors
    Res Sq PubMed  Europe PubMed DOI
  2. 2024
  3. Altayb,H.N. and Alatawi,H.A.
    Employing Machine Learning-Based QSAR for Targeting Zika Virus NS3 Protease: Molecular Insights and Inhibitor Discovery
    Pharmaceuticals (Basel)17, PubMed  Europe PubMed DOI
  4. Anindita,P.D., Otsuka,Y., Lattmann,S., Ngo,K.H., Liew,C.W., Kang,C., Harris,R.S., Scampavia,L., Spicer,T.P. and Luo,D.
    A high-throughput cell-based screening method for Zika virus protease inhibitor discovery
    SLAS Discov100164-100164. PubMed  Europe PubMed DOI
  5. Cavina,L., Bouma,M.J., Girones,D. and Feiters,M.C.
    Orthoflaviviral Inhibitors in Clinical Trials, Preclinical In Vivo Efficacy Targeting NS2B-NS3 and Cellular Antiviral Activity via Competitive Protease Inhibition
    Molecules29, PubMed  Europe PubMed DOI  V  I
  6. Cruz,K.G., Alexander,K., Makhaik,S. and Hardy,J.A.
    FRET Probes for Detection of Both Active and Inactive Zika Virus Protease
    Biochemistry PubMed  Europe PubMed DOI
  7. Cruz,K.G., Hill Eron,M., Makhaik,S., Savinov,S. and Hardy,J.A.
    A Non-Active-Site Inhibitor with Selectivity for Zika Virus NS2B-NS3 Protease
    ACS Infect Dis10, 412-425. PubMed  Europe PubMed DOI  I
  8. Feng,Y.
    Recent advances in the study of zika virus structure, drug targets, and inhibitors
    Front Pharmacol15, 1418516-1418516. PubMed  Europe PubMed DOI
  9. Huber,S., Braun,N.J., Schmacke,L.C., Murra,R., Bender,D., Hildt,E., Heine,A. and Steinmetzer,T.
    Synthesis and structural characterization of new macrocyclic inhibitors of the Zika virus NS2B-NS3 protease
    Arch Pharm (Weinheim)e2400250-e2400250. PubMed  Europe PubMed DOI
  10. Ni,X., Godoy,A.S., Marples,P.G., Fairhead,M., Balcomb,B.H., Ferla,M.P., Tomlinson,C.W.E., Wang,S., Giroud,C., Aschenbrenner,J.C., Lithgo,R.M., Winokan,M., Chandran,A.V., Thompson,W., Xavier,M.A., Williams,E.P., Walsh,M., Fearon,D., Koekemoer,L. and von Delft,F.
    Crystallographic fragment screening delivers diverse chemical scaffolds for Zika virus NS2B-NS3 protease inhibitor development
    bioRxiv PubMed  Europe PubMed DOI
  11. Savino,D.F., Silva,J.V., da Silva Santos,S., Lourenco,F.R. and Giarolla,J.
    How do physicochemical properties contribute to inhibitory activity of promising peptides against Zika Virus NS3 protease?
    J Mol Model30, 54-54. PubMed  Europe PubMed DOI
  12. Shorkey,S.A., Zhang,Y., Sharp,J., Clingman,S., Nguyen,L., Chen,J. and Chen,M.
    Tuning single-molecule ClyA nanopore tweezers for real-time tracking of the conformational dynamics of West Nile viral NS2B/NS3 protease
    bioRxiv PubMed  Europe PubMed DOI
  13. Souza,B., Pontes,M., de,O.C., Sousa,F.d., Tizziani,T., Pollo,E., Dambros,B.P., Scotti,M.T., Steindel,M., Braga,A.L., Schirmeister,T., Assis,F.d. and Sandjo,L.P.
    Inhibitory Effects of Mangifera indica Secondary Metabolites and Their Synthetic Derivatives against SARS-CoV-2 M(pro) and NS2B/NS3 (ZIKV and DENV-2)
    ACS Omega9, 44624-44638. PubMed  Europe PubMed DOI
  14. Starvaggi,J., Previti,S., Zappala,M. and Ettari,R.
    The Inhibition of NS2B/NS3 Protease: A New Therapeutic Opportunity to Treat Dengue and Zika Virus Infection
    Int J Mol Sci25, PubMed  Europe PubMed DOI
  15. Sultana,T., Zheng,C., Morton,G. and Megraw,T.L.
    Zika virus NS3 drives the assembly of a viroplasm-like structure
    bioRxiv PubMed  Europe PubMed DOI
  16. Ullah,S., Ullah,F., Rahman,W., Ullah,A., Haider,S. and Yueguang,C.
    Elucidating the inhibitory mechanism of Zika virus NS2B-NS3 protease with dipeptide inhibitors: Insights from molecular docking and molecular dynamics simulations
    PLoS ONE19, e0307902-e0307902. PubMed  Europe PubMed DOI
  17. Zhou,P., Zhang,Q., Yang,Y., Wu,W., Chen,D., Zheng,Z., Jongkaewwattana,A., Jin,H., Zhou,H. and Luo,R.
    Cleavage of SQSTM1/p62 by the Zika virus protease NS2B3 prevents autophagic degradation of viral NS3 and NS5 proteins
    Autophagy1-16. PubMed  Europe PubMed DOI
  18. 2023
  19. Andrade,M.A., Mottin,M., Sousa,B.K.P., Barbosa,J.A.R.G., Dos Santos Azevedo,C., Lasse Silva,C., Goncalves de Andrade,M., Motta,F.N., Maulay-Bailly,C., Amand,S., Santana,J.M., Horta Andrade,C., Grellier,P. and Bastos,I.M.D.
    Identification of novel Zika virus NS3 protease inhibitors with different inhibition modes by integrative experimental and computational approaches
    Biochimie212, 143-152. PubMed  Europe PubMed DOI  I
  20. Braun,N.J., Huber,S., Schmacke,L.C., Heine,A. and Steinmetzer,T.
    Boroleucine-Derived Covalent Inhibitors of the ZIKV Protease
    ChemMedChem18, e202200336-e202200336. PubMed  Europe PubMed DOI
  21. De Jesus-Gonzalez,L.A., Palacios-Rapalo,S.N., Reyes-Ruiz,J.M., Osuna-Ramos,J.F., Farfan-Morales,C.N., Cordero-Rivera,C.D., Cisneros,B., Gutierrez-Escolano,A.L. and Del Angel,R.M.
    Nucleo-Cytoplasmic Transport of ZIKV Non-Structural 3 Protein Is Mediated by Importin-alpha/beta and Exportin CRM-1
    J Virol97, e0177322-e0177322. PubMed  Europe PubMed DOI
  22. Ezzemani,W., Altawalah,H., Windisch,M., Ouladlahsen,A., Saile,R., Kettani,A. and Ezzikouri,S.
    Identification of Zika virus NS2B-NS3 protease and NS5 polymerase inhibitors by structure-based virtual screening of FDA-approved drugs
    J Biomol Struct Dyn1-16. PubMed  Europe PubMed DOI
  23. Hammerschmidt,S.J., Huber,S., Braun,N.J., Lander,M., Steinmetzer,T. and Kersten,C.
    Thermodynamic characterization of a macrocyclic Zika virus NS2B/NS3 protease inhibitor and its acyclic analogs
    Arch Pharm (Weinheim)356, e2200518-e2200518. PubMed  Europe PubMed DOI
  24. Kumar,A., Kumar,P., Mishra,P.M. and Giri,R.
    Investigating the folding dynamics of NS2B protein of Zika virus
    Virology584, 24-36. PubMed  Europe PubMed DOI
  25. Lin,W.W., Huang,Y.J., Wang,Y.T., Lin,Y.S., Mazibuko,N., Chen,C.S., Cheng,T.L., Chang,C.S., Leu,Y.L., Chen,C.Y. and Chuang,C.H.
    Development of NS2B-NS3 protease inhibitor that impairs Zika virus replication
    Virus Res329, 199092-199092. PubMed  Europe PubMed DOI
  26. Manzato,V.M., Di Santo,C., Torquato,R.J.S., Coelho,C., Gallo,G., Hardy,L., Wurtele,M. and Tanaka,A.S.
    Boophilin D1, a Kunitz type protease inhibitor, as a source of inhibitors for the ZIKA virus NS2B-NS3 protease
    Biochimie214, 96-101. PubMed  Europe PubMed DOI
  27. Maus,H., Hammerschmidt,S.J., Hinze,G., Barthels,F., Perez Carrillo,V.H., Hellmich,U.A., Basche,T. and Schirmeister,T.
    The effects of allosteric and competitive inhibitors on ZIKV protease conformational dynamics explored through smFRET, nanoDSF, DSF, and (19)F NMR
    Eur J Med Chem258, 115573-115573. PubMed  Europe PubMed DOI
  28. Meewan,I., Shiryaev,S.A., Kattoula,J., Huang,C.T., Lin,V., Chuang,C.H., Terskikh,A.V. and Abagyan,R.
    Allosteric Inhibitors of Zika Virus NS2B-NS3 Protease Targeting Protease in "Super-Open" Conformation
    Viruses15, PubMed  Europe PubMed DOI
  29. Pant,S. and Jena,N.R.
    Repurposing of antiparasitic drugs against the NS2B-NS3 protease of the Zika virus
    J Biomol Struct Dyn1-13. PubMed  Europe PubMed DOI
  30. Shiryaev,S.A., Cieplak,P., Cheltsov,A., Liddington,R.C. and Terskikh,A.V.
    Dual function of Zika virus NS2B-NS3 protease
    PLoS Pathog19, e1011795-e1011795. PubMed  Europe PubMed DOI
  31. 2022
  32. Cao,X., Liu,K., Yan,S., Li,S., Li,Y., Jin,T. and Liu,S.
    Mechanical regulation of the helicase activity of Zika virus NS3
    Biophys J121, 4900-4908. PubMed  Europe PubMed DOI
  33. Coelho,C., Gallo,G., Hardy,L., Bottazzi,M.E., Campos,C. and Wurtele,M.
    Biochemical Screening of Potent Zika Virus Protease Inhibitors
    ChemMedCheme202100695-e202100695. PubMed  Europe PubMed DOI  I
  34. Colarusso,S., Ferrigno,F., Ponzi,S., Pavone,F., Conte,I., Abate,L., Beghetto,E., Missineo,A., Amaudrut,J., Bresciani,A., Paonessa,G., Tomei,L., Montalbetti,C., Bianchi,E., Toniatti,C. and Ontoria,J.M.
    SAR evolution towards potent C-terminal carboxamide peptide inhibitors of Zika virus NS2B-NS3 protease
    Bioorg Med Chem57, 116631-116631. PubMed  Europe PubMed DOI  I
  35. Huber,S., Braun,N.J., Schmacke,L.C., Quek,J.P., Murra,R., Bender,D., Hildt,E., Luo,D., Heine,A. and Steinmetzer,T.
    Structure-Based Optimization and Characterization of Macrocyclic Zika Virus NS2B-NS3 Protease Inhibitors
    J Med Chem65, 6555-6572. PubMed  Europe PubMed DOI
  36. Jiang,H., Zhang,Y., Wu,Y., Cheng,J., Feng,S., Wang,J., Wang,X. and Cheng,M.
    Identification of Montelukast as flavivirus NS2B-NS3 protease inhibitor by inverse virtual screening and experimental validation
    Biochem Biophys Res Commun606, 87-93. PubMed  Europe PubMed DOI  I
  37. Kumar,S., El-Kafrawy,S.A., Bharadwaj,S., Maitra,S.S., Alandijany,T.A., Faizo,A.A., Khateb,A.M., Dwivedi,V.D. and Azhar,E.I.
    Discovery of Bispecific Lead Compounds from Azadirachta indica against ZIKA NS2B-NS3 Protease and NS5 RNA Dependent RNA Polymerase Using Molecular Simulations
    Molecules27, PubMed  Europe PubMed DOI
  38. Miao,J., Yuan,H., Rao,J., Zou,J., Yang,K., Peng,G., Cao,S., Chen,H. and Song,Y.
    Identification of a small compound that specifically inhibits Zika virus in vitro and in vivo by targeting the NS2B-NS3 protease
    Antiviral Res199, 105255-105255. PubMed  Europe PubMed DOI  I
  39. Mottin,M., de Paula Sousa,B.K., de Moraes Roso Mesquita,N.C., de Oliveira,K.I.Z., Noske,G.D., Sartori,G.R., de Oliveira Albuquerque,A., Urbina,F., Puhl,A.C., Moreira-Filho,J.T., Souza,G.E., Guido,R.V.C., Muratov,E., Neves,B.J., Martins da Silva,J.H., Clark,A.E., Siqueira-Neto,J.L., Perryman,A.L., Oliva,G., Ekins,S. and Andrade,C.H.
    Discovery of New Zika Protease and Polymerase Inhibitors through the Open Science Collaboration Project OpenZika
    J Chem Inf Model62, 6825-6843. PubMed  Europe PubMed DOI  I
  40. Mottin,M., Caesar,L.K., Brodsky,D., Mesquita,N.C.M.R., de Oliveira,K.Z., Noske,G.D., Sousa,B.K.P., Ramos,P.R.P.S., Jarmer,H., Loh,B., Zorn,K.M., Foil,D.H., Torres,P.M., Guido,R.V.C., Oliva,G., Scholle,F., Ekins,S., Cech,N.B., Andrade,C.H. and Laster,S.M.
    Chalcones from Angelica keiskei (ashitaba) inhibit key Zika virus replication proteins
    Bioorg Chem120, 105649-105649. PubMed  Europe PubMed DOI  I
  41. Pant,S., Bhattacharya,G. and Jena,N.R.
    Structures and dynamics of peptide and peptidomimetic inhibitors bound to the NS2B-NS3 protease of the ZIKA virus
    J Biomol Struct Dyn1-13. PubMed  Europe PubMed DOI  I
  42. Samrat,S.K., Xu,J., Li,Z., Zhou,J. and Li,H.
    Antiviral Agents against Flavivirus Protease: Prospect and Future Direction
    Pathogens11, PubMed  Europe PubMed DOI  V
  43. Santos,N.P., Santos,L.H., Torquato Quezado de Magalhaes,M., Lei,J., Hilgenfeld,R., Salgado Ferreira,R. and Bleicher,L.
    Characterization of an Allosteric Pocket in Zika Virus NS2B-NS3 Protease
    J Chem Inf Model62, 945-957. PubMed  Europe PubMed DOI
  44. Silva,J.V., Savino,D., Hirata,M.H., Ferreira,G.M. and Giarolla,J.
    Zika Virus NS2B-NS3 Protease: Quantum Chemical Properties Insights into Designing Inhibitory Peptides
    Protein Pept Lett29, 901-910. PubMed  Europe PubMed DOI
  45. Xiong,Y., Cheng,F., Zhang,J., Su,H., Hu,H., Zou,Y., Li,M. and Xu,Y.
    Structure-based design of a novel inhibitor of the ZIKA virus NS2B/NS3 protease
    Bioorg Chem128, 106109-106109. PubMed  Europe PubMed DOI
  46. 2021
  47. Baltina,L.A., Lai,H.C., Liu,Y.C., Huang,S.H., Hour,M.J., Baltina,L.A., Nugumanov,T.R., Borisevich,S.S., Khalilov,L.M., Petrova,S.F., Khursan,S.L. and Lin,C.W.
    Glycyrrhetinic acid derivatives as Zika virus inhibitors: Synthesis and antiviral activity in vitro
    Bioorg Med Chem41, 116204-116204. PubMed  Europe PubMed DOI  I
  48. Chen,W., Foo,S.S., Hong,E., Wu,C., Lee,W.S., Lee,S.A., Evseenko,D., Moreira,M.E.L., Garcia-Sastre,A., Cheng,G., Nielsen-Saines,K., Brasil,P., Avvad-Portari,E. and Jung,J.U.
    Zika virus NS3 protease induces bone morphogenetic protein-dependent brain calcification in human fetuses
    Nat Microbiol PubMed  Europe PubMed DOI
  49. Chong Teoh,T., Al-Harbi,J., Abdulrahman,A.Y. and Rothan,H.A.
    Doxycycline Interferes with Zika Virus Serine Protease and Inhibits Virus Replication in Human Skin Fibroblasts
    Molecules26, PubMed  Europe PubMed DOI  I
  50. Dabrowska,A., Milewska,A., Ner-Kluza,J., Suder,P. and Pyrc,K.
    Mass Spectrometry versus Conventional Techniques of Protein Detection: Zika Virus NS3 Protease Activity towards Cellular Proteins
    Molecules26, PubMed  Europe PubMed DOI
  51. Kumar,A., Kumar,P., Aarthy,M., Singh,S.K. and Giri,R.
    Experiments and simulation on ZIKV NS2B-NS3 protease reveal its complex folding
    Virology556, 110-123. PubMed  Europe PubMed DOI
  52. Li,Q. and Kang,C.
    Structure and Dynamics of Zika Virus Protease and Its Insights into Inhibitor Design
    Biomedicines9, PubMed  Europe PubMed DOI
  53. Lima,C.S., Mottin,M., de Assis,L.R., Mesquita,N.C.M.R., Sousa,B.K.P., Coimbra,L.D., Santos,K.B., Zorn,K.M., Guido,R.V.C., Ekins,S., Marques,R.E., Proenca-Modena,J.L., Oliva,G., Andrade,C.H. and Regasini,L.O.
    Flavonoids from Pterogyne nitens as Zika virus NS2B-NS3 protease inhibitors
    Bioorg Chem109, 104719-104719. PubMed  Europe PubMed DOI  I
  54. Liu,L., Downs,M., Guidry,J. and Wojcik,E.J.
    Inter-organelle interactions between the ER and mitotic spindle facilitates Zika protease cleavage of human Kinesin-5 and results in mitotic defects
    iScience24, 102385-102385. PubMed  Europe PubMed DOI
  55. Nie,S., Zhao,J., Wu,X., Yao,Y., Wu,F., Lin,Y.L., Li,X., Kneubehl,A.R., Vogt,M.B., Rico-Hesse,R. and Song,Y.
    Synthesis, structure-activity relationship and antiviral activity of indole-containing inhibitors of Flavivirus NS2B-NS3 protease
    Eur J Med Chem225, 113767-113767. PubMed  Europe PubMed DOI  I
  56. Nunes,D.A.F., Santos,F.R.D.S., da Fonseca,S.T.D., de Lima,W.G., Nizer,W.S.D.C., Ferreira,J.M.S. and de Magalhaes,J.C.
    NS2B-NS3 protease inhibitors as promising compounds in the development of antivirals against Zika virus: A systematic review
    J Med Virol PubMed  Europe PubMed DOI  I
  57. Patil,N.A., Quek,J.P., Schroeder,B., Morewood,R., Rademann,J., Luo,D. and Nitsche,C.
    2-Cyanoisonicotinamide Conjugation: A Facile Approach to Generate Potent Peptide Inhibitors of the Zika Virus Protease
    ACS Med Chem Lett12, 732-737. PubMed  Europe PubMed DOI  I
  58. Santos,L.H., Caffarena,E.R. and Ferreira,R.S.
    pH and non-covalent ligand binding modulate Zika virus NS2B/NS3 protease binding site residues: Discoveries from MD and constant pH MD simulations
    J Biomol Struct Dyn1-14. PubMed  Europe PubMed DOI
  59. Yamaoka,Y., Matsunaga,S., Jeremiah,S.S., Nishi,M., Miyakawa,K., Morita,T., Khatun,H., Shimizu,H., Okabe,N., Kimura,H., Hasegawa,H. and Ryo,A.
    Zika virus protease induces caspase-independent pyroptotic cell death by directly cleaving gasdermin D
    Biochem Biophys Res Commun534, 666-671. PubMed  Europe PubMed DOI
  60. Yu,X., Shan,C., Zhu,Y., Ma,E., Wang,J., Wang,P., Shi,P.Y. and Cheng,G.
    A mutation-mediated evolutionary adaptation of Zika virus in mosquito and mammalian host
    Proc Natl Acad Sci U S A118, PubMed  Europe PubMed DOI
  61. 2020
  62. Abrams,R.P.M., Yasgar,A., Teramoto,T., Lee,M.H., Dorjsuren,D., Eastman,R.T., Malik,N., Zakharov,A.V., Li,W., Bachani,M., Brimacombe,K., Steiner,J.P., Hall,M.D., Balasubramanian,A., Jadhav,A., Padmanabhan,R., Simeonov,A. and Nath,A.
    Therapeutic candidates for the Zika virus identified by a high-throughput screen for Zika protease inhibitors
    Proc Natl Acad Sci U S A117, 31365-31375. PubMed  Europe PubMed DOI
  63. Arias-Arias,J.L., MacPherson,D.J., Hill,M.E., Hardy,J.A. and Mora-Rodriguez,R.
    A fluorescence-activatable reporter of flavivirus NS2B-NS3 protease activity enables live imaging of infection in single cells and viral plaques
    J Biol Chem295, 2212-2226. PubMed  Europe PubMed DOI  A  L
  64. Behnam,M.A.M. and Klein,C.D.P.
    Conformational selection in the flaviviral NS2B-NS3 protease
    Biochimie174, 117-125. PubMed  Europe PubMed DOI  S  I
  65. Campos,D.M.O., Bezerra,K.S., Esmaile,S.C., Fulco,U.L., Albuquerque,E.L. and Oliveira,J.I.N.
    Intermolecular interactions of cn-716 and acyl-KR-aldehyde dipeptide inhibitors against Zika virus
    Phys Chem Chem Phys22, 15683-15695. PubMed  Europe PubMed DOI
  66. Cui,X., Zhou,R., Huang,C., Zhang,R., Wang,J., Zhang,Y., Ding,J., Li,X., Zhou,J. and Cen,S.
    Identification of Theaflavin-3,3'-Digallate as a Novel Zika Virus Protease Inhibitor
    Front Pharmacol11, 514313-514313. PubMed  Europe PubMed DOI  I
  67. Li,Z., Xu,J., Lang,Y., Fan,X., Kuo,L., D'Brant,L., Hu,S., Samrat,S.K., Trudeau,N., Tharappel,A.M., Rugenstein,N., Koetzner,C.A., Zhang,J., Chen,H., Kramer,L.D., Butler,D., Zhang,Q.Y., Zhou,J. and Li,H.
    JMX0207, a Niclosamide Derivative with Improved Pharmacokinetics, Suppresses Zika Virus Infection Both In Vitro and In Vivo
    ACS Infect Dis PubMed  Europe PubMed DOI  I
  68. Morewood,R. and Nitsche,C.
    A biocompatible stapling reaction for in situ generation of constrained peptides
    Chem Sci12, 669-674. PubMed  Europe PubMed DOI
  69. Pach,S., Sarter,T.M., Yousef,R., Schaller,D., Bergemann,S., Arkona,C., Rademann,J., Nitsche,C. and Wolber,G.
    Catching a moving target: comparative modeling of flaviviral NS2B-NS3 reveals small molecule Zika protease inhibitors
    ACS Med Chem Lett11, 514-520. PubMed  Europe PubMed DOI  I
  70. Quek,J.P., Liu,S., Zhang,Z., Li,Y., Ng,E.Y., Loh,Y.R., Hung,A.W., Luo,D. and Kang,C.
    Identification and structural characterization of small molecule fragments targeting Zika virus NS2B-NS3 protease
    Antiviral Res175, 104707-104707. PubMed  Europe PubMed DOI  I
  71. Ren,J., Lee,H., Kotak,A. and Johnson,M.E.
    MD simulations reveal alternate conformations of the oxyanion hole in the Zika virus NS2B/NS3 protease
    Proteins88, 345-354. PubMed  Europe PubMed DOI
  72. Rut,W., Groborz,K., Zhang,L., Modrzycka,S., Poreba,M., Hilgenfeld,R. and Drag,M.
    Profiling of flaviviral NS2B-NS3 protease specificity provides a structural basis for the development of selective chemical tools that differentiate Dengue from Zika and West Nile viruses
    Antiviral Res175, 104731-104731. PubMed  Europe PubMed DOI  P
  73. Santos,F.R.S., Nunes,D.A.F., Lima,W.G., Davyt,D., Santos,L.L., Taranto,A.G. and M S Ferreira,J.
    Identification of Zika virus NS2B-NS3 protease inhibitors by structure-based virtual screening and drug repurposing approaches
    J Chem Inf Model60, 731-737. PubMed  Europe PubMed DOI  I
  74. Voss,S. and Nitsche,C.
    Inhibitors of the Zika virus protease NS2B-NS3
    Bioorg Med Chem Lett30, 126965-126965. PubMed  Europe PubMed DOI  I
  75. Xing,H., Xu,S., Jia,F., Yang,Y., Xu,C., Qin,C. and Shi,L.
    Zika NS2B is a crucial factor recruiting NS3 to the ER and activating its protease activity
    Virus Res275, 197793-197793. PubMed  Europe PubMed DOI
  76. 2019
  77. Akaberi,D., Chinthakindi,P.K., Bahlstrom,A., Palanisamy,N., Sandstrom,A., Lundkvist,A. and Lennerstrand,J.
    Identification of a C2-symmetric diol based human immunodeficiency virus protease inhibitor targeting Zika virus NS2B-NS3 protease
    J Biomol Struct Dyn1-11. PubMed  Europe PubMed DOI  I
  78. Bowen,L.R., Li,D.J., Nola,D.T., Anderson,M.O., Heying,M., Groves,A.T. and Eagon,S.
    Identification of potential Zika virus NS2B-NS3 protease inhibitors via docking, molecular dynamics and consensus scoring-based virtual screening
    J Mol Model25, 194-194. PubMed  Europe PubMed DOI  I
  79. Chiramel,A.I., Meyerson,N.R., McNally,K.L., Broeckel,R.M., Montoya,V.R., Mendez-Solis,O., Robertson,S.J., Sturdevant,G.L., Lubick,K.J., Nair,V., Youseff,B.H., Ireland,R.M., Bosio,C.M., Kim,K., Luban,J., Hirsch,V.M., Taylor,R.T., Bouamr,F., Sawyer,S.L. and Best,S.M.
    TRIM5alpha Restricts Flavivirus Replication by Targeting the Viral Protease for Proteasomal Degradation
    Cell Rep27, 3269-3283. PubMed  Europe PubMed DOI
  80. Choudhry,H., Alzahrani,F.A., Hassan,M.A., Alghamdi,A., Abdulaal,W.H., Bakhrebah,M.A., Zamzami,M.A., Helmi,N., Bokhari,F.F., Zeyadi,M., Baothman,O.A., Kamal,M.A., Warsi,M.K., Ali,A., Jarullah,B. and Jamal,M.S.
    Zika virus targeting by screening inhibitors against NS2B/NS3 protease
    Biomed Res Int2019, 3947245-3947245. PubMed  Europe PubMed DOI  I
  81. da Silva-Junior,E.F. and de Araujo-Junior,J.X.
    Peptide derivatives as inhibitors of NS2B-NS3 protease from Dengue, West Nile, and Zika flaviviruses
    Bioorg Med Chem27, 3963-3978. PubMed  Europe PubMed DOI  I
  82. Ferreira,R.O. and Garcez,P.P.
    Dissecting the toxic effects of Zika virus proteins on neural progenitor cells
    Neuron101, 989-991. PubMed  Europe PubMed DOI
  83. Li,H., Saucedo-Cuevas,L., Yuan,L., Ross,D., Johansen,A., Sands,D., Stanley,V., Guemez-Gamboa,A., Gregor,A., Evans,T., Chen,S., Tan,L., Molina,H., Sheets,N., Shiryaev,S.A., Terskikh,A.V., Gladfelter,A.S., Shresta,S., Xu,Z. and Gleeson,J.G.
    Zika virus protease cleavage of host protein septin-2 mediates mitotic defects in neural progenitors
    Neuron101, 1089-1098. PubMed  Europe PubMed DOI
  84. Lim,L., Gupta,G., Roy,A., Kang,J., Srivastava,S., Shi,J. and Song,J.
    Structurally- and dynamically-driven allostery of the chymotrypsin-like proteases of SARS, Dengue and Zika viruses
    Prog Biophys Mol Biol143, 52-66. PubMed  Europe PubMed DOI  S
  85. Majerova,T., Novotny,P., Krysova,E. and Konvalinka,J.
    Exploiting the unique features of Zika and Dengue proteases for inhibitor design
    Biochimie166, 132-141. PubMed  Europe PubMed DOI  I
  86. Millies,B., von Hammerstein,F., Gellert,A., Hammerschmidt,S., Barthels,F., Goppel,U., Immerheiser,M., Elgner,F., Jung,N., Basic,M., Kersten,C., Kiefer,W., Bodem,J., Hildt,E., Windbergs,M., Hellmich,U.A. and Schirmeister,T.
    Proline-based allosteric inhibitors of Zika and Dengue virus NS2B/NS3 proteases
    J Med Chem62, 11359-11382. PubMed  Europe PubMed DOI  I
  87. Ng,E.Y., Loh,Y.R., Li,Y., Li,Q. and Kang,C.
    Expression, purification of Zika virus membrane protein-NS2B in detergent micelles for NMR studies
    Protein Expr Purif154, 1-6. PubMed  Europe PubMed DOI
  88. Nitsche,C., Onagi,H., Quek,J.P., Otting,G., Luo,D. and Huber,T.
    Biocompatible macrocyclization between cysteine and 2-cyanopyridine generates stable peptide inhibitors
    Org Lett21, 4709-4712. PubMed  Europe PubMed DOI  I
  89. Nitsche,C.
    Proteases from dengue, West Nile and Zika viruses as drug targets
    Biophys Rev11, 157-165. PubMed  Europe PubMed DOI  I
  90. Nitsche,C., Passioura,T., Varava,P., Mahawaththa,M.C., Leuthold,M.M., Klein,C.D., Suga,H. and Otting,G.
    De novo discovery of nonstandard macrocyclic peptides as noncompetitive inhibitors of the Zika virus NS2B-NS3 protease
    ACS Med Chem Lett10, 168-174. PubMed  Europe PubMed DOI  I
  91. Nutho,B., Mulholland,A.J. and Rungrotmongkol,T.
    Quantum mechanics/molecular mechanics (QM/MM) calculations support a concerted reaction mechanism for the Zika virus NS2B/NS3 serine protease with its substrate
    J Phys Chem B123, 2889-2903. PubMed  Europe PubMed DOI  P
  92. Nutho,B. and Rungrotmongkol,T.
    Binding recognition of substrates in NS2B/NS3 serine protease of Zika virus revealed by molecular dynamics simulations
    J Mol Graph Model92, 227-235. PubMed  Europe PubMed DOI  P
  93. Nutho,B., Mulholland,A.J. and Rungrotmongkol,T.
    The reaction mechanism of Zika virus NS2B/NS3 serine protease inhibition by dipeptidyl aldehyde: a QM/MM study
    Phys Chem Chem Phys21, 14945-14956. PubMed  Europe PubMed DOI  I
  94. Rassias,G., Zogali,V., Swarbrick,C.M.D., Ki Chan,K.W., Chan,S.A., Gwee,C.P., Wang,S., Kaplanai,E., Canko,A., Kiousis,D., Lescar,J., Luo,D., Matsoukas,M.T. and Vasudevan,S.G.
    Cell-active carbazole derivatives as inhibitors of the zika virus protease
    Eur J Med Chem180, 536-545. PubMed  Europe PubMed DOI  I
  95. Saw,W.G., Pan,A., Subramanian Manimekalai,M.S., Gruber,A. and Gruber,G.
    Structure and flexibility of non-structural proteins 3 and -5 of Dengue- and Zika viruses in solution
    Prog Biophys Mol Biol143, 67-77. PubMed  Europe PubMed DOI
  96. von Hammerstein,F., Lauth,L.M., Hammerschmidt,S., Wagner,A., Schirmeister,T. and Hellmich,U.A.
    Cis autocatalytic cleavage of glycine-linked Zika virus NS2B-NS3 protease constructs
    FEBS Lett593, 2204-2213. PubMed  Europe PubMed DOI
  97. Wu,Z., Zhang,W., Wu,Y., Wang,T., Wu,S., Wang,M., Jia,R., Zhu,D., Liu,M., Zhao,X., Yang,Q., Wu,Y., Zhang,S., Liu,Y., Zhang,L., Yu,Y., Pan,L., Merits,A., Chen,S. and Cheng,A.
    Binding of the duck Tembusu virus protease to STING is mediated by NS2B and is crucial for STING cleavage and for impaired induction of IFN-beta
    J Immunol203, 3374-3385. PubMed  Europe PubMed DOI
  98. Yao,Y., Huo,T., Lin,Y.L., Nie,S., Wu,F., Hua,Y., Wu,J., Kneubehl,A.R., Vogt,M.B., Rico-Hesse,R. and Song,Y.
    Discovery, X-ray crystallography and antiviral activity of allosteric inhibitors of flavivirus NS2B-NS3 protease
    J Am Chem Soc141, 6832-6836. PubMed  Europe PubMed DOI  I
  99. Zhang,X., Xie,X., Xia,H., Zou,J., Huang,L., Popov,V.L., Chen,X. and Shi,P.Y.
    Zika virus NS2A-mediated virion assembly
    MBio10, PubMed  Europe PubMed DOI
  100. 2018
  101. Coronado,M.A., Eberle,R.J., Bleffert,N., Feuerstein,S., Olivier,D.S., de Moraes,F.R., Willbold,D. and Arni,R.K.
    Zika virus NS2B/NS3 proteinase: a new target for an old drug - suramin a lead compound for NS2B/NS3 proteinase inhibition
    Antiviral Res160, 118-125. PubMed  Europe PubMed DOI  I
  102. Ding,Q., Gaska,J.M., Douam,F., Wei,L., Kim,D., Balev,M., Heller,B. and Ploss,A.
    Species-specific disruption of STING-dependent antiviral cellular defenses by the Zika virus NS2B3 protease
    Proc Natl Acad Sci U S A115, E6310-E6310. PubMed  Europe PubMed DOI
  103. Gruba,N., Martinez,J.I.R., Grzywa,R., Wysocka,M., Skorenski,M., Dabrowska,A., Lecka,M., Suder,P., Sienczyk,M., Pyrc,K. and Lesner,A.
    One step beyond: design of substrates spanning primed positions of Zika virus NS2B-NS3 protease
    ACS Med Chem Lett9, 1025-1029. PubMed  Europe PubMed DOI  A  P
  104. Hilgenfeld,R., Lei,J. and Zhang,L.
    The structure of the Zika virus protease, NS2B/NS3(pro)
    Adv Exp Med Biol1062, 131-145. PubMed  Europe PubMed DOI  S
  105. Hill,M.E., Kumar,A., Wells,J.A., Hobman,T.C., Julien,O. and Hardy,J.A.
    The unique cofactor region of Zika virus NS2B-NS3 protease facilitates cleavage of key host proteins
    ACS Chem Biol13, 2398-2405. PubMed  Europe PubMed DOI
  106. Kumar,A., Liang,B., Aarthy,M., Singh,S.K., Garg,N., Mysorekar,I.U. and Giri,R.
    Hydroxychloroquine inhibits Zika virus NS2B-NS3 protease
    ACS Omega3, 18132-18141. PubMed  Europe PubMed DOI
  107. Li,Y., Loh,Y.R., Hung,A.W. and Kang,C.
    Characterization of molecular interactions between Zika virus protease and peptides derived from the C-terminus of NS2B
    Biochem Biophys Res Commun503, 691-696. PubMed  Europe PubMed DOI
  108. Li,Y., Zhang,Z., Phoo,W.W., Loh,Y.R., Li,R., Yang,H.Y., Jansson,A.E., Hill,J., Keller,T.H., Nacro,K., Luo,D. and Kang,C.
    Structural insights into the inhibition of Zika virus NS2B-NS3 protease by a small-molecule inhibitor
    Structure26, 555-564. PubMed  Europe PubMed DOI  S  I
  109. McFadden,M.J., Mitchell-Dick,A., Vazquez,C., Roder,A.E., Labagnara,K.F., McMahon,J.J., Silver,D.L. and Horner,S.M.
    A fluorescent cell-based system for imaging Zika virus infection in real-time
    Viruses10, PubMed  Europe PubMed DOI  L
  110. Phoo,W.W., Zhang,Z., Wirawan,M., Chew,E.J.C., Chew,A.B.L., Kouretova,J., Steinmetzer,T. and Luo,D.
    Structures of Zika virus NS2B-NS3 protease in complex with peptidomimetic inhibitors
    Antiviral Res160, 17-24. PubMed  Europe PubMed DOI  S  I
  111. Pinkham,A.M., Yu,Z. and Cowan,J.A.
    Broad-spectrum catalytic metallopeptide inactivators of Zika and West Nile virus NS2B/NS3 proteases
    Chem Commun (Camb)54, 12357-12360. PubMed  Europe PubMed DOI  I
  112. Rana,J., Slon Campos,J.L., Leccese,G., Francolini,M., Bestagno,M., Poggianella,M. and Burrone,O.R.
    Role of capsid anchor in the morphogenesis of Zika virus
    J Virol92, e01174-18-e01174-18. PubMed  Europe PubMed DOI
  113. 2017
  114. Aguilera-Pesantes,D. and Mendez,M.A.
    Structure and sequence based functional annotation of Zika virus NS2b protein: computational insights
    Biochem Biophys Res Commun492, 659-667. PubMed  Europe PubMed DOI
  115. Badshah,S.L., Naeem,A. and Mabkhot,Y.
    The new high resolution crystal structure of NS2B-NS3 protease of Zika virus
    Viruses9, PubMed  Europe PubMed DOI  S
  116. Chan,J.F., Chik,K.K., Yuan,S., Yip,C.C., Zhu,Z., Tee,K.M., Tsang,J.O., Chan,C.C., Poon,V.K., Lu,G., Zhang,A.J., Lai,K.K., Chan,K.H., Kao,R.Y. and Yuen,K.Y.
    Novel antiviral activity and mechanism of bromocriptine as a Zika virus NS2B-NS3 protease inhibitor
    Antiviral Res141, 29-37. PubMed  Europe PubMed DOI  I
  117. Kang,C., Keller,T.H. and Luo,D.
    Zika virus protease: an antiviral drug target
    Trends Microbiol25, 797-808. PubMed  Europe PubMed DOI  T
  118. Kuiper,B.D., Slater,K., Spellmon,N., Holcomb,J., Medapureddy,P., Muzzarelli,K.M., Yang,Z., Ovadia,R., Amblard,F., Kovari,I.A., Schinazi,R.F. and Kovari,L.C.
    Increased activity of unlinked Zika virus NS2B/NS3 protease compared to linked Zika virus protease
    Biochem Biophys Res Commun492, 668-673. PubMed  Europe PubMed DOI  E
  119. Lee,H., Ren,J., Nocadello,S., Rice,A.J., Ojeda,I., Light,S., Minasov,G., Vargas,J., Nagarathnam,D., Anderson,W.F. and Johnson,M.E.
    Identification of novel small molecule inhibitors against NS2B/NS3 serine protease from Zika virus
    Antiviral Res139, 49-58. PubMed  Europe PubMed DOI  S  I
  120. Li,Y., Phoo,W.W., Loh,Y.R., Zhang,Z., Ng,E.Y., Wang,W., Keller,T.H., Luo,D. and Kang,C.
    Structural characterization of the linked NS2B-NS3 protease of Zika virus
    FEBS Lett591, 2338-2347. PubMed  Europe PubMed DOI  S
  121. Li,Y., Zhang,Z., Phoo,W.W., Loh,Y.R., Wang,W., Liu,S., Chen,M.W., Hung,A.W., Keller,T.H., Luo,D. and Kang,C.
    Structural dynamics of Zika virus NS2B-NS3 protease binding to dipeptide inhibitors
    Structure25, 1242-1250. PubMed  Europe PubMed DOI  S  I
  122. Li,Z., Brecher,M., Deng,Y.Q., Zhang,J., Sakamuru,S., Liu,B., Huang,R., Koetzner,C.A., Allen,C.A., Jones,S.A., Chen,H., Zhang,N.N., Tian,M., Gao,F., Lin,Q., Banavali,N., Zhou,J., Boles,N., Xia,M., Kramer,L.D., Qin,C.F. and Li,H.
    Existing drugs as broad-spectrum and potent inhibitors for Zika virus by targeting NS2B-NS3 interaction
    Cell Res27, 1046-1064. PubMed  Europe PubMed DOI  I
  123. Lim,H.J., Nguyen,T.T., Kim,N.M., Park,J.S., Jang,T.S. and Kim,D.
    Inhibitory effect of flavonoids against NS2B-NS3 protease of ZIKA virus and their structure activity relationship
    Biotechnol Lett39, 415-421. PubMed  Europe PubMed DOI  I
  124. Mahawaththa,M.C., Pearce,B.J., Szabo,M., Graham,B., Klein,C.D., Nitsche,C. and Otting,G.
    Solution conformations of a linked construct of the Zika virus NS2B-NS3 protease
    Antiviral Res142, 141-147. PubMed  Europe PubMed DOI  S
  125. Roy,A., Lim,L., Srivastava,S., Lu,Y. and Song,J.
    Solution conformations of Zika NS2B-NS3pro and its inhibition by natural products from edible plants
    PLoS ONE12, e0180632-e0180632. PubMed  Europe PubMed DOI  S  I
  126. Rut,W., Zhang,L., Kasperkiewicz,P., Poreba,M., Hilgenfeld,R. and Drag,M.
    Extended substrate specificity and first potent irreversible inhibitor/activity-based probe design for Zika virus NS2B-NS3 protease
    Antiviral Res139, 88-94. PubMed  Europe PubMed DOI  P  I
  127. Saw,W.G., Pan,A., Subramanian Manimekalai,M.S. and Gruber,G.
    Structural features of Zika virus non-structural proteins 3 and -5 and its individual domains in solution as well as insights into NS3 inhibition
    Antiviral Res141, 73-90. PubMed  Europe PubMed DOI  S
  128. Shiryaev,S.A., Farhy,C., Pinto,A., Huang,C.T., Simonetti,N., Ngono,A.E., Dewing,A., Shresta,S., Pinkerton,A.B., Cieplak,P., Strongin,A.Y. and Terskikh,A.V.
    Characterization of the Zika virus two-component NS2B-NS3 protease and structure-assisted identification of allosteric small-molecule antagonists
    Antiviral Res143, 218-229. PubMed  Europe PubMed DOI  I
  129. Yuan,S., Chan,J.F., den-Haan,H., Chik,K.K., Zhang,A.J., Chan,C.C., Poon,V.K., Yip,C.C., Mak,W.W., Zhu,Z., Zou,Z., Tee,K.M., Cai,J.P., Chan,K.H., de la Pena,J., Perez-Sanchez,H., Ceron-Carrasco,J.P. and Yuen,K.Y.
    Structure-based discovery of clinically approved drugs as Zika virus NS2B-NS3 protease inhibitors that potently inhibit Zika virus infection in vitro and in vivo
    Antiviral Res145, 33-43. PubMed  Europe PubMed DOI  I
  130. 2016
  131. Chen,X., Yang,K., Wu,C., Chen,C., Hu,C., Buzovetsky,O., Wang,Z., Ji,X., Xiong,Y. and Yang,H.
    Mechanisms of activation and inhibition of Zika virus NS2B-NS3 protease
    Cell Res26, 1260-1263. PubMed  Europe PubMed DOI  S  I
  132. Crunkhorn,S.
    Infectious disease: 3D structure of Zika virus protease
    Nat Rev Drug Discov15, 604-604. PubMed  Europe PubMed DOI  S  I
  133. Gruba,N., Rodriguez Martinez,J.I., Grzywa,R., Wysocka,M., Skorenski,M., Burmistrz,M., Lecka,M., Lesner,A., Sienczyk,M. and Pyrc,K.
    Substrate profiling of Zika virus NS2B-NS3 protease
    FEBS Lett590, 3459-3468. PubMed  Europe PubMed DOI  P
  134. Lei,J., Hansen,G., Nitsche,C., Klein,C.D., Zhang,L. and Hilgenfeld,R.
    Crystal structure of Zika virus NS2B-NS3 protease in complex with a boronate inhibitor
    Science353, 503-505. PubMed  Europe PubMed DOI  S  I
  135. Phoo,W.W., Li,Y., Zhang,Z., Lee,M.Y., Loh,Y.R., Tan,Y.B., Ng,E.Y., Lescar,J., Kang,C. and Luo,D.
    Structure of the NS2B-NS3 protease from Zika virus after self-cleavage
    Nat Commun7, 13410-13410. PubMed  Europe PubMed DOI  S
  136. Sahoo,M., Jena,L., Daf,S. and Kumar,S.
    Virtual screening for potential inhibitors of NS3 protein of zika virus
    Genomics Inform14, 104-111. PubMed  Europe PubMed DOI  I
  137. Zhang,Z., Li,Y., Loh,Y.R., Phoo,W.W., Hung,A.W., Kang,C. and Luo,D.
    Crystal structure of unlinked NS2B-NS3 protease from Zika virus
    Science354, 1597-1600. PubMed  Europe PubMed DOI  S