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Literature for peptidase S01.280: lysyl endopeptidase (bacteria)

Summary Alignment Tree Sequences Sequence features Distribution Structure Literature Substrates

(Topics flags: S Structure, I Inhibitor, P Specificity, E Expression, V Review. To select only the references relevant to a single topic, click the link above. See explanation.)

    2025
  1. Pourani,Z., Keramati,M., Komijani,S., Golkar,M., Cohan,R.A., Mohseni,N. and Valizadeh,V.<br>Efficient periplasmic expression of active lysyl endopeptidase and optimizing the purification methods<br>Protein Expr Purif (2025) 226, 106618-106618. PubMed  Europe PubMed DOI
    2. 2019
  2. Hakobyan,A., Schneider,M.B., Liesack,W. and Glatter,T.<br>Efficient tandem LysC/trypsin digestion in detergent conditions<br>Proteomics (2019) , e1900136-e1900136. PubMed  Europe PubMed DOI
    3. 2018
  3. Wu,Z., Huang,J., Huang,J., Li,Q. and Zhang,X.<br>Lys-C/Arg-C, a more specific and efficient digestion approach for proteomics studies<br>Anal Chem (2018) 90, 9700-9707. PubMed  Europe PubMed DOI
    4. 2017
  4. Li,Q., Feng,Y., Tan,M.-J. and Zhai,L.-H.<br>Evaluation of endoproteinase Lys-C/trypsin sequential digestion used in proteomics sample preparation<br>Fenxi Huaxue Chin J Anal Chem (2017) 45, 316-321. DOI
  5. Takami,H., Toyoda,A., Uchiyama,I., Itoh,T., Takaki,Y., Arai,W., Nishi,S., Kawai,M., Shin-Ya,K. and Ikeda,H.<br>Complete genome sequence and expression profile of the commercial lytic enzyme producer Lysobacter enzymogenes M497-1<br>DNA Res (2017) 24, 169-177. PubMed  Europe PubMed DOI
    6. 2016
  6. Giansanti,P., Tsiatsiani,L., Low,T.Y. and Heck,A.J.<br>Six alternative proteases for mass spectrometry-based proteomics beyond trypsin<br>Nat Protoc (2016) 11, 993-1006. PubMed  Europe PubMed DOI
  7. Stressler,T., Eisele,T., Meyer,S., Wangler,J., Hug,T., Lutz-Wahl,S. and Fischer,L.<br>Heterologous expression and pro-peptide supported refolding of the high specific endopeptidase Lys-C<br>Protein Expr Purif (2016) 118, 31-38. PubMed  Europe PubMed DOI  E
    8. 2015
  8. Tsfasman,I.M., Lapteva,Y.S., Krasovskaya,L.A., Kudryakova,I.V., Vasilyeva,N.V., Granovsky,I.E. and Stepnaya,O.A.<br>Gene expression of lytic endopeptidases AlpA and AlpB from Lysobacter sp. XL1 in pseudomonads<br>J Mol Microbiol Biotechnol (2015) 25, 244-252. PubMed  Europe PubMed DOI  E
    9. 2014
  9. Asztalos,P., Muller,A., Holke,W., Sobek,H. and Rudolph,M.G.<br>Atomic resolution structure of a lysine-specific endoproteinase from Lysobacter enzymogenes suggests a hydroxyl group bound to the oxyanion hole<br>Acta Crystallogr D Biol Crystallogr (2014) 70, 1832-1843. PubMed  Europe PubMed DOI  S
  10. Gershon,P.D.<br>Cleaved and missed sites for trypsin, Lys-C, and Lys-N can be predicted with high confidence on the basis of sequence context<br>J Proteome Res (2014) 13, 702-709. PubMed  Europe PubMed DOI  P
  11. Gokcen,A., Vilcinskas,A. and Wiesner,J.<br>Biofilm-degrading enzymes from Lysobacter gummosus<br>Virulence (2014) 5, 378-387. PubMed  Europe PubMed DOI
  12. Kessler,E. and Safrin,M.<br>Elastinolytic and proteolytic enzymes<br>Methods Mol Biol (2014) 1149, 135-169. PubMed  Europe PubMed DOI  V
    13. 2013
  13. Achour,B. and Barber,J.<br>The activities of Achromobacter lysyl endopeptidase and Lysobacter lysyl endoproteinase as digestive enzymes for quantitative proteomics<br>Rapid Commun Mass Spectrom (2013) 27, 1669-1672. PubMed  Europe PubMed DOI
  14. Ohnishi,Y., Yamada,T., Kurihara,K., Tanaka,I., Sakiyama,F., Masaki,T. and Niimura,N.<br>Neutron and X-ray crystallographic analysis of Achromobacter protease I at pD 8.0: Protonation states and hydration structure in the free-form<br>Biochim Biophys Acta (2013) 1834, 1642-1647. PubMed  Europe PubMed DOI  S
    15. 2012
  15. Sakiyama,F. and Masaki,T.<br>Lysyl endopeptidase<br>[ISSN:978-0-12-407742-3] (2012) 3, 2543-2545. DOI
    16. 2011
  16. Kishimoto,T., Kondo,J., Takai-Igarashi,T. and Tanaka,H.<br>Accurate mass comparison coupled with two endopeptidases enables identification of protein termini<br>Proteomics (2011) 11, 485-489. PubMed  Europe PubMed DOI
    17. 2010
  17. Andersen,A.S., Palmqvist,E., Bang,S., Shaw,A.C., Hubalek,F., Ribel,U. and Hoeg-Jensen,T.<br>Backbone cyclic insulin<br>J Pept Sci (2010) 16, 473-479. PubMed  Europe PubMed DOI
  18. Ito,L., Shiraki,K., Uchida,T., Okumura,M. and Yamaguchi,H.<br>Crystallization and preliminary crystallographic analysis of Achromobacter protease I mutants<br>Acta Crystallograph Sect F Struct Biol Cryst Commun (2010) 66, 1531-1532. PubMed  Europe PubMed DOI
  19. Kim,J., Jones,L., Taylor,L., Kannan,G., Jackson,F., Lau,H., Latypov,R.F. and Bailey,B.<br>Characterization of a unique IgG1 mAb CEX profile by limited Lys-C proteolysis/CEX separation coupled with mass spectrometry and structural analysis<br>J Chromatogr B Analyt Technol Biomed Life Sci (2010) 878, 1973-1981. PubMed  Europe PubMed DOI
  20. Ohnishi,Y., Masaki,T., Yamada,T., Kurihara,K., Tanaka,I. and Niimura,N.<br>A preliminary neutron diffraction analysis of Achromobacter protease I<br>J Phys Conf Ser (2010) 251, 012032-012032. DOI  S
  21. Raijmakers,R., Neerincx,P., Mohammed,S. and Heck,A.J.<br>Cleavage specificities of the brother and sister proteases Lys-C and Lys-N<br>Chem Commun (Camb) (2010) 46, 8827-8829. PubMed  Europe PubMed DOI  P
    22. 2004
  22. Chohnan,S., Shiraki,K., Yokota,K., Ohshima,M., Kuroiwa,N., Ahmed,K., Masaki,T. and Sakiyama,F.<br>A second lysine-specific serine protease from Lysobacter sp. strain IB-9374<br>J Bacteriol (2004) 186, 5093-5100. PubMed  Europe PubMed DOI  PMC  EPMC
  23. Sakiyama,F.<br>Lysyl endopeptidase<br>[ISSN:0-12-079610-4] (2004) 2, 1454-1455.  V
    24. 2002
  24. [YEAR:16-7-2002]Chohnan,S., Nonaka,J., Teramoto,K., Taniguchi,K., Kameda,Y., Tamura,H., Kurusu,Y., Norioka,S., Masaki,T. and Sakiyama,F.<br>Lysobacter strain with high lysyl endopeptidase production<br>FEMS Microbiol Lett (16-7-2002) 213, 13-20. PubMed  Europe PubMed DOI
  25. Shiraki,K., Norioka,S., Li,S. and Sakiyama,F.<br>Contribution of an imidazole-indole stack to high catalytic potency of a lysine-specific serine protease, Achromobacter protease I<br>J Biochem (2002) 131, 213-218. PubMed  Europe PubMed
  26. Shiraki,K. and Sakiyama,F.<br>Histidine 210 mutant of a trypsin-type Achromobacter protease I shows broad optimum pH range<br>J Biosci Bioeng (2002) 93, 331-333. PubMed  Europe PubMed
  27. Shiraki,K., Norioka,S., Li,S., Yokota,K. and Sakiyama,F.<br>Electrostatic role of aromatic ring stacking in the pH-sensitive modulation of a chymotrypsin-type serine protease, Achromobacter protease I<br>Eur J Biochem (2002) 269, 4152-4158. PubMed  Europe PubMed DOI
    28. 1999
  28. Ikai,A., Ookata,K., Shimizu,M., Nakamichi,N., Ito,M. and Matsumura,T.<br>A recombinant bait region mutant of human alpha2-macroglobulin exhibiting an altered proteinase-inhibiting spectrum<br>Cytotechnology (1999) 31, 53-60. PubMed  Europe PubMed DOI
    29. 1997
  29. Eriksen,J. and Holm,K.A.<br>Automated colorimetric determination of Achromobacter lyticus protease activity in fermentation samples using Tos-Gly-Pro-Lys-pNA as a chromogenic substrate<br>Analyst (1997) 122, 169-172. DOI
    30. 1996
  30. Oda,Y., Kitagawa,Y., Yamaguchi,H., Matsuura,Y., Katsube,Y., Masaki,T., Tanaka,T., Matsuura,S., Norioka,S. and Sakiyama,F.<br>Crystallization and preliminary X-ray diffraction analysis of two lysinal derivatives of Achromobacter protease I<br>Acta Crystallogr D Biol Crystallogr (1996) 52, 1027-1029. PubMed  Europe PubMed DOI  I
    31. 1994
  31. Masaki,T., Takiya,T., Kuwahara,S., Soejima,M., Tsunasawa,S. and Sakiyama,F.<br>Hydrolysis of S-2-aminoethylcysteinyl peptide bond by Achromobacter protease I<br>Biosci Biotechnol Biochem (1994) 58, 215-216. PubMed  Europe PubMed DOI
  32. [YEAR:24-6-1994]Norioka,S., Ohta,S., Ohara,T., Lim,S.I. and Sakiyama,F.<br>Identification of three catalytic triad constituents and Asp-225 essential for function of lysine-specific serine protease, Achromobacter protease I<br>J Biol Chem (24-6-1994) 269, 17025-17029. PubMed  Europe PubMed
  33. Sakiyama,F. and Masaki,T.<br>Lysyl endopeptidase of Achromobacter lyticus<br>Methods Enzymol (1994) 244, 126-137. PubMed  Europe PubMed DOI  V
    34. 1992
  34. Masaki,T., Tanaka,T., Tsunasawa,S., Sakiyama,F. and Soejima,M.<br>Inhibition of Achromobacter protease I by lysinal derivatives<br>Biosci Biotechnol Biochem (1992) 56, 1604-1607. PubMed  Europe PubMed DOI  I
  35. Norioka,S. and Sakiyama,F.<br>Lysine-specific serine protease from Achromobacter lyticus: its substrate specificity and comparison with trypsin<br>J Protein Chem (1992) 11, 369-370. DOI
    36. 1989
  36. Ohara,T., Makino,K., Shinagawa,H., Nakata,A., Norioka,S. and Sakiyama,F.<br>Cloning, nucleotide sequence, and expression of Achromobacter protease I gene<br>J Biol Chem (1989) 264, 20625-20631. PubMed  Europe PubMed
  37. Tsunasawa,S., Masaki,T., Hirose,M., Soejima,M. and Sakiyama,F.<br>The primary structure and structural characteristics of Achromobacter lyticus protease I, a lysine-specific serine protease<br>J Biol Chem (1989) 264, 3832-3839. PubMed  Europe PubMed
    38. 1988
  38. Bank,R.A., Crusius,B.C., Zwiers,T., Meuwissen,S.G., Arwert,F. and Pronk,J.C.<br>Identification of a Glu > Lys substitution in the activation segment of human pepsinogen A-3 and -5 isozymogens by peptide mapping using endoproteinase Lys-C<br>FEBS Lett (1988) 238, 105-108. PubMed  Europe PubMed
  39. Van Leuven,F., Marynen,P., Cassiman,J.J. and Van Den Berghe,H.<br>Proteolysis of human alpha2-macroglobulin without hydrolysis of the internal thiolesters or expression of the receptor recognition site<br>J Biol Chem (1988) 263, 468-471. PubMed  Europe PubMed
    40. 1986
  40. Van Leuven,F., Marynen,P., Sottrup-Jensen,L., Cassiman,J.J. and Van Den Berghe,H.<br>The receptor-binding domain of human alpha2-macroglobulin. Isolation after limited proteolysis with a bacterial proteinase<br>J Biol Chem (1986) 261, 11369-11373. PubMed  Europe PubMed
    41. 1983
  41. Jekel,P.A., Weijer,W.J. and Beintema,J.J.<br>Use of endoproteinase Lys-C from Lysobacter enzymogenes in protein sequence analysis<br>Anal Biochem (1983) 134, 347-354. PubMed  Europe PubMed
    42. 1981
  42. Masaki,T., Tanabe,M., Nakamura,K. and Soejima,M.<br>Studies on a new proteolytic enzyme from Achromobacter lyticus M497-1. I. Purification and some enzymatic properties<br>Biochim Biophys Acta (1981) 660, 44-50. PubMed  Europe PubMed
  43. Masaki,T., Fujihashi,T., Nakamura,K. and Soejima,M.<br>Studies on a new proteolytic enzyme from Achromobacter lyticus M497-1. II. Specificity and inhibition studies of Achromobacter protease I<br>Biochim Biophys Acta (1981) 660, 51-55. PubMed  Europe PubMed
    44. 1978
  44. Masaki,T., Nakamura,K., Isono,M. and Soejima,M.<br>A new proteolytic enzyme from Achromobacter lyticus M497-I<br>Agric Biol Chem (1978) 42, 1443-1445.

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