Happy Holidays and New year from the EMDB! Please be advised that the EMDB team will be operating at reduced capacity between December 15th - January 12th. With this in mind we would ask that you be prepared for longer reply times through both our helpdesk system and the OneDep deposition system. well done on a productive 2025, wishing you all the best and we will see you in 2026!

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Filter By

Current Database

  • EMDB [69]

Current status

  • REL [69]

Sample type

  • Protein [68]
  • Complex [65]
  • Ligand [43]
  • Cellular component [3]
  • Cell [1]
  • RNA [1]
  • Sample [1]

Organism

  • Aequorea victoria [69]
  • Homo sapiens [30]
  • Rattus norvegicus [11]
  • Lama glama [8]
  • Mus musculus [6]
  • Synthetic construct [5]
  • Arabidopsis thaliana [4]
  • Bacillus subtilis [3]
  • Geobacillus thermodenitrificans [3]
  • Escherichia coli [3]
  • Escherichia coli [3]
  • Mycobacterium tuberculosis [2]
  • Mycolicibacterium smegmatis [2]
  • Influenza a virus [2]
  • Oryctolagus cuniculus [2]
  • Influenza a virus [1]
  • Bacillus subtilis [1]
  • Pseudomonas aeruginosa [1]
  • Severe acute respiratory syndrome coronavirus [1]
  • Saccharomyces cerevisiae [1]
  • Leiurus quinquestriatus [1]
  • Pyrococcus horikoshii [1]

EM Method

  • Single-particle [66]
  • Helical reconstruction [3]

Resolution

  • ≥ 2Å and < 3Å [15]
  • ≥ 3Å and < 4Å [45]
  • ≥ 4Å and < 5Å [4]
  • ≥ 5Å and < 6Å [4]
  • ≥ 16Å and < 20Å [1]

Model molecular weight

  • 50-100 kDa [5]
  • 100-250 kDa [28]
  • 250-500 kDa [23]
  • 500-1000 kDa [7]
  • 1-2 MDa [3]

Release Date

  • 2025 [34]
  • 2024 [8]
  • 2023 [6]
  • 2022 [7]
  • 2021 [5]
  • 2020 [3]
  • 2019 [3]
  • 2018 [2]
  • 2004 [1]

Author by name

  • Jiang D [8]
  • Shi Y [8]
  • Li Y [7]
  • Selvakumar P [6]
  • Swartz KJ [6]
  • Catterall WA [5]
  • Gamal El-Din Tm [5]
  • Gilbert RJC [5]
  • Gong J [5]
  • Huang Z [5]
  • Khanra N [5]
  • Sun D [5]
  • Tonggu L [5]
  • Zhang J [5]
  • Zheng N [5]
  • Carrique L [4]
  • Chen H [4]
  • Davis BG [4]
  • Duerr KL [4]
  • Fairhead M [4]
  • Gouaux E [4]
  • Guo F [4]
  • Jalali-yazdi F [4]
  • Kim J [4]
  • Lee Y [4]
  • Lenaeus MJ [4]
  • Li H [4]
  • Li L [4]
  • Mamalis D [4]
  • Sauer DB [4]
  • Wang B [4]
  • Wang Y [4]
  • Ye M [4]
  • Yi G [4]
  • Zhang P [4]
  • Von Delft F [4]
  • Berndsen ZT [3]
  • Bonn-garcia S [3]
  • Bowman CA [3]
  • Buschiazzo A [3]
  • Carazo JM [3]
  • Chakraborty S [3]
  • Ferguson JA [3]
  • Fernandez-marino AI [3]
  • Galdino Andrade T [3]
  • Gao N [3]
  • Gragera M [3]
  • He C [3]
  • Herfst S [3]
  • Herreros D [3]
  • Huang R [3]
  • Jiang DH [3]
  • Jung DD [3]
  • Kantorow J [3]
  • Krieger JM [3]
  • Liu Y [3]
  • Ma C [3]
  • Marques RE [3]
  • Medalia O [3]
  • Melero R [3]
  • Meyerson JR [3]
  • Oeverdieck S [3]
  • Ou X [3]
  • Paquette AJ [3]
  • Peng W [3]
  • Plitt CM [3]
  • Pluckthun A [3]
  • Rice WJ [3]
  • Shen H [3]
  • Smider VV [3]
  • Snijder J [3]
  • Sorzano CO [3]
  • Stevens E [3]
  • Tomris I [3]
  • Torrents De La Pena A [3]
  • Vacca S [3]
  • Ward AB [3]
  • Wu X [3]
  • Yang B [3]
  • De Paiva Froes Rocha R [3]
  • De Vries Rp [3]
  • Al-bassam J [2]
  • Ashaduzzaman M [2]
  • Bai Y [2]
  • Bamba T [2]
  • Bharat TAM [2]
  • Bohning J [2]
  • Bowie D [2]
  • Brown PM [2]
  • Brown PMGE [2]
  • Cai Y [2]
  • Chen HW [2]
  • Chen Y [2]
  • Claff T [2]
  • Dong J [2]
  • Du EJ [2]
  • Du M [2]
  • Ebenhoch R [2]
  • Edelstein PH [2]
  • Fan J [2]

Author by ORCID

  • Jiang D [8]
  • Swartz KJ [6]
  • Huang Z [5]
  • Tonggu L [5]
  • Gamal El-Din Tm [5]
  • Carrique L [4]
  • Fairhead M [4]
  • Kim J [4]
  • Ye M [4]
  • Sauer DB [4]
  • Gilbert RJC [4]
  • Jalali-yazdi F [4]
  • Davis BG [4]
  • Li H [4]
  • Gouaux E [4]
  • Von Delft F [4]
  • Zhang P [4]
  • Catterall WA [3]
  • Krieger JM [3]
  • Li Y [3]
  • Ward AB [3]
  • Tomris I [3]
  • Melero R [3]
  • Herfst S [3]
  • Zheng N [3]
  • Yang B [3]
  • De Vries Rp [3]
  • Bonn-garcia S [3]
  • Selvakumar P [3]
  • Buschiazzo A [3]
  • Gragera M [3]
  • Zhang J [3]
  • Rice WJ [3]
  • Meyerson JR [3]
  • Vacca S [3]
  • Chakraborty S [3]
  • Wang B [3]
  • Snijder J [3]
  • Sorzano CO [3]
  • Carazo JM [3]
  • Medalia O [3]
  • Kantorow J [3]
  • Herreros D [3]
  • Smider VV [3]
  • Pluckthun A [3]
  • Berndsen ZT [3]
  • Stevens E [3]
  • Oeverdieck S [3]
  • Kley JT [2]
  • Yeates TO [2]
  • Al-bassam J [2]
  • Lee YJ [2]
  • Nishizawa T [2]
  • Taheri A [2]
  • Jiang J [2]
  • Claff T [2]
  • Brown PM [2]
  • Mclaughlin SH [2]
  • Bowie D [2]
  • Perozzo AM [2]
  • Nagata S [2]
  • Bharat TAM [2]
  • Weichert D [2]
  • Korkhov VM [2]
  • Shen H [2]
  • Hwang J [2]
  • Lee Y [2]
  • Shi H [2]
  • Hata K [2]
  • Takahashi M [2]
  • Nar H [2]
  • Edelstein PH [2]
  • Lim HH [2]
  • Meyerson J [2]
  • Nomura N [2]
  • Bamba T [2]
  • Lee Y [2]
  • Xu J [2]
  • Ashaduzzaman M [2]
  • Kang K [2]
  • Jun SH [2]
  • Li L [2]
  • Ramakrishnan L [2]
  • Luisi BF [2]
  • Takahashi K [2]
  • Segawa K [2]
  • Fried SD [2]
  • Magarkar A [2]
  • Huang B [2]
  • Lee S [2]
  • Khanra N [2]
  • Fountain AJ [2]
  • Ebenhoch R [2]
  • Zhang H [2]
  • Izumi Y [2]
  • Jung S [2]
  • Gong J [2]
  • Tang Y [2]
  • Meador K [1]
  • Ramasubramani V [1]

Journal

  • NAT COMMUN [19]
  • TO BE PUBLISHED [9]
  • CELL [7]
  • NAT STRUCT MOL BIOL [6]
  • BIORXIV [4]
  • NAT CHEM BIOL [4]
  • ELIFE [3]
  • SCI ADV [3]
  • CELL RES [2]
  • IUCRJ [2]
  • PNAS [2]
  • CELL DISCOV [1]
  • ISCIENCE [1]
  • JCI INSIGHT [1]
  • MOL CELL [1]
  • NAT CARDIOVASC RES [1]
  • NAT CHEM [1]
  • NAT METHODS [1]
  • NAT NANOTECHNOL [1]
  • STRUCTURE [1]

Software

  • CRYOSPARC [32]
  • RELION [10]
  • CISTEM [2]
  • UCSF CHIMERA [2]
  • XMIPP [2]
  • CTFFIND [1]
  • GAP [1]
  • GCTF [1]
  • PHENIX [1]
  • SPIDER, IMAGIC, GAP, CNS, XPLOR [1]

Microscope

  • FEI TITAN KRIOS [43]
  • TFS KRIOS [13]
  • FEI TECNAI ARCTICA [4]
  • TFS GLACIOS [3]
  • FEI TALOS ARCTICA [2]
  • JEOL CRYO ARM 300 [2]
  • FEI/PHILIPS CM200FEG [1]
  • TFS TALOS [1]

Electron Source

  • FIELD EMISSION GUN [69]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [25]
  • GATAN K3 BIOQUANTUM 6K X 4K [17]
  • GATAN K3 6K X 4K [14]
  • GATAN K2 QUANTUM 4K X 4K [5]
  • FEI FALCON IV 4K X 4K [4]
  • FEI FALCON II 4K X 4K [1]
  • FEI FALCON III 4K X 4K [1]
  • GATAN K2 IS 4K X 4K [1]
  • KODAK SO-163 FILM [1]

External links

  • AlphaFold DB [66]
  • PDB [66]
  • PDBe-Kb [66]
  • UniProt [66]
  • Pfam [56]
  • Gene Ontology [51]
  • InterPro [42]
  • ChEBI [39]
  • ChEMBL [28]
  • DrugBank [23]
  • Complex Portal [10]
  • EMPIAR [7]
  • CATH [3]
Sort by: Download
Showing 1 - 10 of 69. Page 1 of 7
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EMD-65443
Download Map
3D View
Cryo-EM structure of hAQP11 in LMNG
Release date: Dec. 31, 2025
Resolution: 2.3 Å
EM Method: Single-particle
Fitted PDBs: 9vxw
Q-score: 0.625

Suzuki S, Kamegawa A, Nishikawa K, Kozai D, Fujiyoshi Y

To Be Published

EMD-53244
Download Map
3D View
Connexin-32 Cx32 W3S mutant gap junction channel in POPC-containing MSP2N2 nanodiscs
Release date: Dec. 17, 2025
Resolution: 2.35 Å
EM Method: Single-particle
Fitted PDBs: 9qnd
Q-score: 0.633

Lavriha P, Fluri C, Hernandez Gonzalez JE, Korkhov VM

Nat Commun (2025) [ DOI: doi:10.1038/s41467-025-67004-z Pubmed: 41350533 ]

EMD-53250
Download Map
3D View
Connexin-32 Cx32 in MSP2N2 nanodiscs with liver polar lipids
Release date: Dec. 17, 2025
Resolution: 3.29 Å
EM Method: Single-particle
Fitted PDBs: 9qnt
Q-score: 0.549

Lavriha P, Fluri C, Hernandez Gonzalez JE, Korkhov VM

Nat Commun (2025) [ DOI: doi:10.1038/s41467-025-67004-z Pubmed: 41350533 ]

EMD-48072
Download Map
3D View
Human Kv1.3 mutant - G427H with A0194009G09 nanobodies
Release date: Dec. 3, 2025
Resolution: 2.91 Å
EM Method: Single-particle
Fitted PDBs: 9ei0
Q-score: 0.537

Selvakumar P, Swartz KJ

To Be Published

EMD-47955
Download Map
3D View
Human Kv1.3 mutant - G427H
Release date: Nov. 26, 2025
Resolution: 3.54 Å
EM Method: Single-particle
Fitted PDBs: 9eef
Q-score: 0.466

Selvakumar P, Swartz KJ

To Be Published

EMD-47962
Download Map
3D View
Human Kv1.3 mutant -G427H Pore domain focused map
Release date: Nov. 26, 2025
Resolution: 3.05 Å
EM Method: Single-particle

Selvakumar P, Swartz KJ

To Be Published

EMD-52346
Download Map
3D View
Cryo-EM structure of mouse TMEM16F-YFP purified and plunged using MISO microfluidic isolation
Release date: Nov. 26, 2025
Resolution: 3.51 Å
EM Method: Single-particle
Fitted PDBs: 9hqp
Q-score: 0.357

Eluru G, De Gieter S, Schenck S, Stroobants A, Shrestha B, Erbel P, Brunner JD, Efremov RG

Nat Methods (2025) 22 pp. 2563-2573 [ DOI: doi:10.1038/s41592-025-02894-x Pubmed: 41233542 ]

EMD-54511
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3D View
1:1 complex of M.tuberculosis MmpL5 and M.smegmatis AcpM
Release date: Oct. 8, 2025
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 9s2u
Q-score: 0.383

Fountain AJ, Bohning J, McLaughlin SH, Morgan TE, Edelstein PH, Troll M, Lamers MH, Bharat TAM, Luisi BF, Ramakrishnan L

PNAS (2025) 122 pp. e2516660122-e2516660122 [ Pubmed: 40986343 DOI: doi:10.1073/pnas.2516660122 ]

EMD-45279
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3D View
Diheteromeric GluN1/GluN2A delM653 in nanodisc complexed with glycine, glutamate, and GNE-4123, open conformation
Release date: Sept. 24, 2025
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 9c7c, 9c7e
Q-score: 0.507

Jalali-Yazdi F, Kim J, Gouaux E

To Be Published

EMD-45283
Download Map
3D View
Diheteromeric GluN1/GluN2A delM653 in digitonin complexed with glycine, glutamate, and GNE-4123
Release date: Sept. 24, 2025
Resolution: 4.61 Å
EM Method: Single-particle
Fitted PDBs: 9c7p
Q-score: 0.295

Jalali-Yazdi F, Kim J, Gouaux E

To Be Published

Sort by: Download
Showing 1 - 10 of 69. Page 1 of 7
Display:
Statistics
×

Download











































Preview first 10
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Filter By

Current Database

  • EMDB [69]

Current status

  • REL [69]

Sample type

  • Protein [68]
  • Complex [65]
  • Ligand [43]
  • Cellular component [3]
  • Cell [1]
  • RNA [1]
  • Sample [1]

Organism

  • Aequorea victoria [69]
  • Homo sapiens [30]
  • Rattus norvegicus [11]
  • Lama glama [8]
  • Mus musculus [6]
  • Synthetic construct [5]
  • Arabidopsis thaliana [4]
  • Bacillus subtilis [3]
  • Geobacillus thermodenitrificans [3]
  • Escherichia coli [3]
  • Escherichia coli [3]
  • Mycobacterium tuberculosis [2]
  • Mycolicibacterium smegmatis [2]
  • Influenza a virus [2]
  • Oryctolagus cuniculus [2]
  • Influenza a virus [1]
  • Bacillus subtilis [1]
  • Pseudomonas aeruginosa [1]
  • Severe acute respiratory syndrome coronavirus [1]
  • Saccharomyces cerevisiae [1]
  • Leiurus quinquestriatus [1]
  • Pyrococcus horikoshii [1]

EM Method

  • Single-particle [66]
  • Helical reconstruction [3]

Resolution

  • ≥ 2Å and < 3Å [15]
  • ≥ 3Å and < 4Å [45]
  • ≥ 4Å and < 5Å [4]
  • ≥ 5Å and < 6Å [4]
  • ≥ 16Å and < 20Å [1]

Model molecular weight

  • 50-100 kDa [5]
  • 100-250 kDa [28]
  • 250-500 kDa [23]
  • 500-1000 kDa [7]
  • 1-2 MDa [3]

Release Date

  • 2025 [34]
  • 2024 [8]
  • 2023 [6]
  • 2022 [7]
  • 2021 [5]
  • 2020 [3]
  • 2019 [3]
  • 2018 [2]
  • 2004 [1]

Author by name

  • Jiang D [8]
  • Shi Y [8]
  • Li Y [7]
  • Selvakumar P [6]
  • Swartz KJ [6]
  • Catterall WA [5]
  • Gamal El-Din Tm [5]
  • Gilbert RJC [5]
  • Gong J [5]
  • Huang Z [5]
  • Khanra N [5]
  • Sun D [5]
  • Tonggu L [5]
  • Zhang J [5]
  • Zheng N [5]
  • Carrique L [4]
  • Chen H [4]
  • Davis BG [4]
  • Duerr KL [4]
  • Fairhead M [4]
  • Gouaux E [4]
  • Guo F [4]
  • Jalali-yazdi F [4]
  • Kim J [4]
  • Lee Y [4]
  • Lenaeus MJ [4]
  • Li H [4]
  • Li L [4]
  • Mamalis D [4]
  • Sauer DB [4]
  • Wang B [4]
  • Wang Y [4]
  • Ye M [4]
  • Yi G [4]
  • Zhang P [4]
  • Von Delft F [4]
  • Berndsen ZT [3]
  • Bonn-garcia S [3]
  • Bowman CA [3]
  • Buschiazzo A [3]
  • Carazo JM [3]
  • Chakraborty S [3]
  • Ferguson JA [3]
  • Fernandez-marino AI [3]
  • Galdino Andrade T [3]
  • Gao N [3]
  • Gragera M [3]
  • He C [3]
  • Herfst S [3]
  • Herreros D [3]
  • Huang R [3]
  • Jiang DH [3]
  • Jung DD [3]
  • Kantorow J [3]
  • Krieger JM [3]
  • Liu Y [3]
  • Ma C [3]
  • Marques RE [3]
  • Medalia O [3]
  • Melero R [3]
  • Meyerson JR [3]
  • Oeverdieck S [3]
  • Ou X [3]
  • Paquette AJ [3]
  • Peng W [3]
  • Plitt CM [3]
  • Pluckthun A [3]
  • Rice WJ [3]
  • Shen H [3]
  • Smider VV [3]
  • Snijder J [3]
  • Sorzano CO [3]
  • Stevens E [3]
  • Tomris I [3]
  • Torrents De La Pena A [3]
  • Vacca S [3]
  • Ward AB [3]
  • Wu X [3]
  • Yang B [3]
  • De Paiva Froes Rocha R [3]
  • De Vries Rp [3]
  • Al-bassam J [2]
  • Ashaduzzaman M [2]
  • Bai Y [2]
  • Bamba T [2]
  • Bharat TAM [2]
  • Bohning J [2]
  • Bowie D [2]
  • Brown PM [2]
  • Brown PMGE [2]
  • Cai Y [2]
  • Chen HW [2]
  • Chen Y [2]
  • Claff T [2]
  • Dong J [2]
  • Du EJ [2]
  • Du M [2]
  • Ebenhoch R [2]
  • Edelstein PH [2]
  • Fan J [2]

Author by ORCID

  • Jiang D [8]
  • Swartz KJ [6]
  • Huang Z [5]
  • Tonggu L [5]
  • Gamal El-Din Tm [5]
  • Carrique L [4]
  • Fairhead M [4]
  • Kim J [4]
  • Ye M [4]
  • Sauer DB [4]
  • Gilbert RJC [4]
  • Jalali-yazdi F [4]
  • Davis BG [4]
  • Li H [4]
  • Gouaux E [4]
  • Von Delft F [4]
  • Zhang P [4]
  • Catterall WA [3]
  • Krieger JM [3]
  • Li Y [3]
  • Ward AB [3]
  • Tomris I [3]
  • Melero R [3]
  • Herfst S [3]
  • Zheng N [3]
  • Yang B [3]
  • De Vries Rp [3]
  • Bonn-garcia S [3]
  • Selvakumar P [3]
  • Buschiazzo A [3]
  • Gragera M [3]
  • Zhang J [3]
  • Rice WJ [3]
  • Meyerson JR [3]
  • Vacca S [3]
  • Chakraborty S [3]
  • Wang B [3]
  • Snijder J [3]
  • Sorzano CO [3]
  • Carazo JM [3]
  • Medalia O [3]
  • Kantorow J [3]
  • Herreros D [3]
  • Smider VV [3]
  • Pluckthun A [3]
  • Berndsen ZT [3]
  • Stevens E [3]
  • Oeverdieck S [3]
  • Kley JT [2]
  • Yeates TO [2]
  • Al-bassam J [2]
  • Lee YJ [2]
  • Nishizawa T [2]
  • Taheri A [2]
  • Jiang J [2]
  • Claff T [2]
  • Brown PM [2]
  • Mclaughlin SH [2]
  • Bowie D [2]
  • Perozzo AM [2]
  • Nagata S [2]
  • Bharat TAM [2]
  • Weichert D [2]
  • Korkhov VM [2]
  • Shen H [2]
  • Hwang J [2]
  • Lee Y [2]
  • Shi H [2]
  • Hata K [2]
  • Takahashi M [2]
  • Nar H [2]
  • Edelstein PH [2]
  • Lim HH [2]
  • Meyerson J [2]
  • Nomura N [2]
  • Bamba T [2]
  • Lee Y [2]
  • Xu J [2]
  • Ashaduzzaman M [2]
  • Kang K [2]
  • Jun SH [2]
  • Li L [2]
  • Ramakrishnan L [2]
  • Luisi BF [2]
  • Takahashi K [2]
  • Segawa K [2]
  • Fried SD [2]
  • Magarkar A [2]
  • Huang B [2]
  • Lee S [2]
  • Khanra N [2]
  • Fountain AJ [2]
  • Ebenhoch R [2]
  • Zhang H [2]
  • Izumi Y [2]
  • Jung S [2]
  • Gong J [2]
  • Tang Y [2]
  • Meador K [1]
  • Ramasubramani V [1]

Journal

  • NAT COMMUN [19]
  • TO BE PUBLISHED [9]
  • CELL [7]
  • NAT STRUCT MOL BIOL [6]
  • BIORXIV [4]
  • NAT CHEM BIOL [4]
  • ELIFE [3]
  • SCI ADV [3]
  • CELL RES [2]
  • IUCRJ [2]
  • PNAS [2]
  • CELL DISCOV [1]
  • ISCIENCE [1]
  • JCI INSIGHT [1]
  • MOL CELL [1]
  • NAT CARDIOVASC RES [1]
  • NAT CHEM [1]
  • NAT METHODS [1]
  • NAT NANOTECHNOL [1]
  • STRUCTURE [1]

Software

  • CRYOSPARC [32]
  • RELION [10]
  • CISTEM [2]
  • UCSF CHIMERA [2]
  • XMIPP [2]
  • CTFFIND [1]
  • GAP [1]
  • GCTF [1]
  • PHENIX [1]
  • SPIDER, IMAGIC, GAP, CNS, XPLOR [1]

Microscope

  • FEI TITAN KRIOS [43]
  • TFS KRIOS [13]
  • FEI TECNAI ARCTICA [4]
  • TFS GLACIOS [3]
  • FEI TALOS ARCTICA [2]
  • JEOL CRYO ARM 300 [2]
  • FEI/PHILIPS CM200FEG [1]
  • TFS TALOS [1]

Electron Source

  • FIELD EMISSION GUN [69]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [25]
  • GATAN K3 BIOQUANTUM 6K X 4K [17]
  • GATAN K3 6K X 4K [14]
  • GATAN K2 QUANTUM 4K X 4K [5]
  • FEI FALCON IV 4K X 4K [4]
  • FEI FALCON II 4K X 4K [1]
  • FEI FALCON III 4K X 4K [1]
  • GATAN K2 IS 4K X 4K [1]
  • KODAK SO-163 FILM [1]

External links

  • AlphaFold DB [66]
  • PDB [66]
  • PDBe-Kb [66]
  • UniProt [66]
  • Pfam [56]
  • Gene Ontology [51]
  • InterPro [42]
  • ChEBI [39]
  • ChEMBL [28]
  • DrugBank [23]
  • Complex Portal [10]
  • EMPIAR [7]
  • CATH [3]