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grant_code:"R310-2018-3713"

Filter By

Current Database

  • EMDB [14]

Current status

  • REL [14]

Sample type

  • Complex [14]
  • Ligand [14]
  • Protein [14]

Organism

  • Homo sapiens [11]
  • Mus musculus [2]
  • Drosophila melanogaster [2]
  • Listeria monocytogenes [1]

EM Method

  • Single-particle [14]

Resolution

  • ≥ 2Å and < 3Å [9]
  • ≥ 3Å and < 4Å [5]

Model molecular weight

  • 50-100 kDa [1]
  • 100-250 kDa [12]
  • 250-500 kDa [1]

Release Date

  • 2024 [3]
  • 2023 [9]
  • 2022 [2]

Author by name

  • Nissen P [14]
  • Flygaard RK [11]
  • Lyons JA [11]
  • Dieudonne T [10]
  • Kock Flygaard R [10]
  • Laursen MJ [10]
  • Lenoir G [10]
  • Lindorff-larsen K [10]
  • Stock C [10]
  • Juknaviciute Laursen M [9]
  • Khalid S [9]
  • Kummerer F [9]
  • Akunuri R [2]
  • Desdorf LM [2]
  • Ita S [2]
  • Mortensen OV [2]
  • Neumann CMT [2]
  • Pedersen CN [2]
  • Salvino JM [2]
  • Schioett B [2]
  • Schiott B [2]
  • Shahsavar A [2]
  • Trampari S [2]
  • Xu Y [2]
  • Yang F [2]
  • Abad-herrera S [1]
  • Basse Hansen S [1]
  • Fenton R [1]
  • Fenton RA [1]
  • Flygaard RF [1]
  • Gad H [1]
  • Gad HH [1]
  • Habeck M [1]
  • Hansen SB [1]
  • Hartmann R [1]
  • Herrera SA [1]
  • Jaxel C [1]
  • Karlsen JL [1]
  • Kjaergaard M [1]
  • Lejeune M [1]
  • Lindtoft Rosenbaek L [1]
  • Lykkegaard Karlsen J [1]
  • Lyons J [1]
  • Montigny C [1]
  • Neumann C [1]
  • Pomorski TG [1]
  • Rosenbaek LL [1]
  • Slimani K [1]
  • Wang Y [1]

Author by ORCID

  • Nissen P [14]
  • Stock C [10]
  • Lindorff-larsen K [10]
  • Lenoir G [10]
  • Lyons JA [10]
  • Khalid S [9]
  • Kummerer F [9]
  • Shahsavar A [2]
  • Schiott B [2]
  • Mortensen OV [2]
  • Flygaard RK [2]
  • Desdorf LM [2]
  • Pedersen CN [2]
  • Dieudonne T [1]
  • Gad HH [1]
  • Wang Y [1]
  • Jaxel C [1]
  • Lejeune M [1]
  • Habeck M [1]
  • Pomorski TG [1]
  • Rosenbaek LL [1]
  • Kjaergaard M [1]
  • Montigny C [1]
  • Hartmann R [1]
  • Neumann C [1]
  • Fenton RA [1]
  • Basse Hansen S [1]

Journal

  • NAT COMMUN [9]
  • J.NEUROCHEM. [2]
  • ELIFE [1]
  • EMBO J [1]
  • EMBO REP [1]

Software

  • CRYOSPARC [13]
  • RELION [1]

Microscope

  • FEI TITAN KRIOS [13]
  • TFS KRIOS [1]

Electron Source

  • FIELD EMISSION GUN [14]

Film or detector model

  • GATAN K3 6K X 4K [12]
  • GATAN K2 SUMMIT 4K X 4K [1]
  • GATAN K3 BIOQUANTUM 6K X 4K [1]

External links

  • AlphaFold DB [14]
  • ChEBI [14]
  • DrugBank [14]
  • InterPro [14]
  • PDB [14]
  • PDBe-Kb [14]
  • Pfam [14]
  • UniProt [14]
  • ChEMBL [13]
  • Gene Ontology [12]
  • Complex Portal [10]
Sort by: Download
Showing 1 - 10 of 14. Page 1 of 2
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EMD-51510
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3D View
Structure of a Ca2 bound phosphoenzyme intermediate in the inward-to-outward transition of Ca2 -ATPase 1 from Listeria monocytogenes
Release date: Oct. 16, 2024
Resolution: 3.46 Å
EM Method: Single-particle
Fitted PDBs: 9gqo
Q-score: 0.331

Basse Hansen S, Flygaard RK, Kjaergaard M, Nissen P

EMBO Rep (2025) 26 pp. 1709-1723 [ DOI: doi:10.1038/s44319-025-00392-x Pubmed: 40016426 ]

EMD-19978
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3D View
Outward-open structure of Drosophila dopamine transporter bound to an atypical non-competitive inhibitor
Release date: July 24, 2024
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 9euo
Q-score: 0.538

Pedersen CN, Yang F, Ita S, Xu Y, Akunuri R, Trampari S, Neumann CMT, Desdorf LM, Schiott B, Salvino JM, Mortensen OV, Nissen P, Shahsavar A

J.Neurochem. (2024) 168 pp. 2043-2055 [ DOI: doi:10.1111/jnc.16179 Pubmed: 39010681 ]

EMD-19979
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Inhibitor-free outward-open structure of Drosophila dopamine transporter
Release date: July 24, 2024
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 9eup
Q-score: 0.544

Pedersen CN, Yang F, Ita S, Xu Y, Akunuri R, Trampari S, Neumann CMT, Desdorf LM, Schiott B, Salvino JM, Mortensen OV, Nissen P, Shahsavar A

J.Neurochem. (2024) 168 pp. 2043-2055 [ DOI: doi:10.1111/jnc.16179 Pubmed: 39010681 ]

EMD-17256
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Cryo-EM structure of ATP8B1-CDC50A in E1-ATP conformation
Release date: Nov. 29, 2023
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8ox4
Q-score: 0.461

Dieudonne T, Kummerer F, Laursen MJ, Stock C, Flygaard RK, Khalid S, Lenoir G, Lyons JA, Lindorff-Larsen K, Nissen P

Nat Commun (2023) 14 pp. 7492-7492 [ DOI: doi:10.1038/s41467-023-42828-9 Pubmed: 37980352 ]

EMD-17257
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3D View
Cryo-EM structure of ATP8B1-CDC50A in E1P-ADP conformation
Release date: Nov. 29, 2023
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8ox5
Q-score: 0.389

Dieudonne T, Kummerer F, Laursen MJ, Stock C, Flygaard RK, Khalid S, Lenoir G, Lyons JA, Lindorff-Larsen K, Nissen P

Nat Commun (2023) 14 pp. 7492-7492 [ DOI: doi:10.1038/s41467-023-42828-9 Pubmed: 37980352 ]

EMD-17258
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3D View
Cryo-EM structure of ATP8B1-CDC50A in E1P conformation
Release date: Nov. 29, 2023
Resolution: 2.39 Å
EM Method: Single-particle
Fitted PDBs: 8ox6
Q-score: 0.509

Dieudonne T, Kummerer F, Laursen MJ, Stock C, Flygaard RK, Khalid S, Lenoir G, Lyons JA, Lindorff-Larsen K, Nissen P

Nat Commun (2023) 14 pp. 7492-7492 [ DOI: doi:10.1038/s41467-023-42828-9 Pubmed: 37980352 ]

EMD-17259
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3D View
Cryo-EM structure of ATP8B1-CDC50A in E2P autoinhibited closed conformation
Release date: Nov. 29, 2023
Resolution: 2.56 Å
EM Method: Single-particle
Fitted PDBs: 8ox7
Q-score: 0.579

Dieudonne T, Kummerer F, Laursen MJ, Stock C, Flygaard RK, Khalid S, Lenoir G, Lyons JA, Lindorff-Larsen K, Nissen P

Nat Commun (2023) 14 pp. 7492-7492 [ DOI: doi:10.1038/s41467-023-42828-9 Pubmed: 37980352 ]

EMD-17260
Download Map
3D View
Cryo-EM structure of ATP8B1-CDC50A in E2P autoinhibited open conformation
Release date: Nov. 29, 2023
Resolution: 2.98 Å
EM Method: Single-particle
Fitted PDBs: 8ox8
Q-score: 0.538

Dieudonne T, Kummerer F, Laursen MJ, Stock C, Flygaard RK, Khalid S, Lenoir G, Lyons JA, Lindorff-Larsen K, Nissen P

Nat Commun (2023) 14 pp. 7492-7492 [ DOI: doi:10.1038/s41467-023-42828-9 Pubmed: 37980352 ]

EMD-17261
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3D View
Cryo-EM structure of ATP8B1-CDC50A in E2P active conformation with bound PC
Release date: Nov. 29, 2023
Resolution: 2.72 Å
EM Method: Single-particle
Fitted PDBs: 8ox9
Q-score: 0.519

Dieudonne T, Kummerer F, Laursen MJ, Stock C, Flygaard RK, Khalid S, Lenoir G, Lyons JA, Lindorff-Larsen K, Nissen P

Nat Commun (2023) 14 pp. 7492-7492 [ DOI: doi:10.1038/s41467-023-42828-9 Pubmed: 37980352 ]

EMD-17262
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3D View
Cryo-EM structure of ATP8B1-CDC50A in E2-Pi conformation with occluded PS
Release date: Nov. 29, 2023
Resolution: 2.76 Å
EM Method: Single-particle
Fitted PDBs: 8oxa
Q-score: 0.546

Dieudonne T, Kummerer F, Laursen MJ, Stock C, Flygaard RK, Khalid S, Lenoir G, Lyons JA, Lindorff-Larsen K, Nissen P

Nat Commun (2023) 14 pp. 7492-7492 [ DOI: doi:10.1038/s41467-023-42828-9 Pubmed: 37980352 ]

Sort by: Download
Showing 1 - 10 of 14. Page 1 of 2
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [14]

Current status

  • REL [14]

Sample type

  • Complex [14]
  • Ligand [14]
  • Protein [14]

Organism

  • Homo sapiens [11]
  • Mus musculus [2]
  • Drosophila melanogaster [2]
  • Listeria monocytogenes [1]

EM Method

  • Single-particle [14]

Resolution

  • ≥ 2Å and < 3Å [9]
  • ≥ 3Å and < 4Å [5]

Model molecular weight

  • 50-100 kDa [1]
  • 100-250 kDa [12]
  • 250-500 kDa [1]

Release Date

  • 2024 [3]
  • 2023 [9]
  • 2022 [2]

Author by name

  • Nissen P [14]
  • Flygaard RK [11]
  • Lyons JA [11]
  • Dieudonne T [10]
  • Kock Flygaard R [10]
  • Laursen MJ [10]
  • Lenoir G [10]
  • Lindorff-larsen K [10]
  • Stock C [10]
  • Juknaviciute Laursen M [9]
  • Khalid S [9]
  • Kummerer F [9]
  • Akunuri R [2]
  • Desdorf LM [2]
  • Ita S [2]
  • Mortensen OV [2]
  • Neumann CMT [2]
  • Pedersen CN [2]
  • Salvino JM [2]
  • Schioett B [2]
  • Schiott B [2]
  • Shahsavar A [2]
  • Trampari S [2]
  • Xu Y [2]
  • Yang F [2]
  • Abad-herrera S [1]
  • Basse Hansen S [1]
  • Fenton R [1]
  • Fenton RA [1]
  • Flygaard RF [1]
  • Gad H [1]
  • Gad HH [1]
  • Habeck M [1]
  • Hansen SB [1]
  • Hartmann R [1]
  • Herrera SA [1]
  • Jaxel C [1]
  • Karlsen JL [1]
  • Kjaergaard M [1]
  • Lejeune M [1]
  • Lindtoft Rosenbaek L [1]
  • Lykkegaard Karlsen J [1]
  • Lyons J [1]
  • Montigny C [1]
  • Neumann C [1]
  • Pomorski TG [1]
  • Rosenbaek LL [1]
  • Slimani K [1]
  • Wang Y [1]

Author by ORCID

  • Nissen P [14]
  • Stock C [10]
  • Lindorff-larsen K [10]
  • Lenoir G [10]
  • Lyons JA [10]
  • Khalid S [9]
  • Kummerer F [9]
  • Shahsavar A [2]
  • Schiott B [2]
  • Mortensen OV [2]
  • Flygaard RK [2]
  • Desdorf LM [2]
  • Pedersen CN [2]
  • Dieudonne T [1]
  • Gad HH [1]
  • Wang Y [1]
  • Jaxel C [1]
  • Lejeune M [1]
  • Habeck M [1]
  • Pomorski TG [1]
  • Rosenbaek LL [1]
  • Kjaergaard M [1]
  • Montigny C [1]
  • Hartmann R [1]
  • Neumann C [1]
  • Fenton RA [1]
  • Basse Hansen S [1]

Journal

  • NAT COMMUN [9]
  • J.NEUROCHEM. [2]
  • ELIFE [1]
  • EMBO J [1]
  • EMBO REP [1]

Software

  • CRYOSPARC [13]
  • RELION [1]

Microscope

  • FEI TITAN KRIOS [13]
  • TFS KRIOS [1]

Electron Source

  • FIELD EMISSION GUN [14]

Film or detector model

  • GATAN K3 6K X 4K [12]
  • GATAN K2 SUMMIT 4K X 4K [1]
  • GATAN K3 BIOQUANTUM 6K X 4K [1]

External links

  • AlphaFold DB [14]
  • ChEBI [14]
  • DrugBank [14]
  • InterPro [14]
  • PDB [14]
  • PDBe-Kb [14]
  • Pfam [14]
  • UniProt [14]
  • ChEMBL [13]
  • Gene Ontology [12]
  • Complex Portal [10]