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Current Database
- EMDB [19780]
- EMPIAR [492]
Current status
- REL [20272]
Sample type
- Complex [17535]
- Protein [15978]
- Ligand [9884]
- RNA [2185]
- DNA [1434]
- Virus [1017]
- Cellular component [889]
- Sample [280]
- Cell [191]
- Tissue [106]
- Other [80]
Organism
- Homo sapiens [8013]
- Synthetic construct [1236]
- Mus musculus [1146]
- Escherichia coli [1009]
- Severe acute respiratory syndrome coronavirus [896]
- Saccharomyces cerevisiae [885]
- Escherichia coli [545]
- Rattus norvegicus [493]
- Human immunodeficiency virus 1 [346]
- Oryctolagus cuniculus [333]
- Sus scrofa [316]
- Saccharomyces cerevisiae [306]
- Lama glama [285]
- Bos taurus [279]
- Xenopus laevis [217]
- Arabidopsis thaliana [189]
- Leishmania tarentolae [128]
- Mycolicibacterium smegmatis [125]
- Bacillus subtilis [121]
- Mycobacterium tuberculosis [110]
- Influenza a virus [102]
- Macaca mulatta [100]
- Escherichia coli [94]
- Gallus gallus [92]
- Danio rerio [90]
- Staphylococcus aureus [87]
- Drosophila melanogaster [85]
- Pseudomonas aeruginosa [83]
- Chlamydomonas reinhardtii [70]
- Chaetomium thermophilum [70]
- Ovis aries [68]
- Trypanosoma brucei [65]
- Caenorhabditis elegans [63]
- Enterobacteria phage t4 [60]
- Vicugna pacos [60]
- Thermus thermophilus [59]
- Mycobacterium tuberculosis [56]
- Pseudomonas aeruginosa [55]
- Bacillus sp. (strain ps3) [54]
- Chaetomium thermophilum [51]
- Tetrahymena thermophila [49]
- Severe acute respiratory syndrome coronavirus [48]
- Plasmodium falciparum [47]
- Lassa mammarenavirus [46]
- Parengyodontium album [46]
- Schizosaccharomyces pombe [45]
- Bacillus subtilis [44]
- Mycoplasma pneumoniae [42]
- Spinacia oleracea [41]
- Clostridioides difficile [40]
- Trypanosoma brucei [39]
- Aequorea victoria [38]
- Cricetulus griseus [37]
- Legionella pneumophila [36]
- Plasmodium falciparum [36]
- Torpedo marmorata [36]
- Saccharomyces cerevisiae [35]
- Vibrio cholerae [35]
- Simian virus 40 [34]
- Salpingoeca rosetta (strain atcc 50818 / bsb-021) [34]
- Macaca fascicularis [34]
- Salmonella enterica [34]
- Dictyostelium discoideum [33]
- Pyrococcus furiosus [32]
- Anthocerotibacter panamensis [32]
- Human herpesvirus 1 [31]
- Escherichia virus t7 [31]
- Rous sarcoma virus [30]
- Adeno-associated dependoparvovirus a [29]
- Euglena gracilis [29]
- Thermococcus profundus [29]
- Klebsiella pneumoniae [29]
- Mycolicibacterium smegmatis [28]
- Escherichia coli [28]
- (no species) [28]
- Influenza a virus [27]
- Clostridium botulinum [26]
- Enterobacteria phage t4 [26]
- Hepatitis b virus [25]
- Acetivibrio thermocellus [25]
- Aquifex aeolicus [25]
- Azotobacter vinelandii [25]
- Oryza sativa [25]
- Salmonella enterica [25]
- Listeria innocua [24]
- Azotobacter vinelandii [24]
- Human immunodeficiency virus 1 [24]
- Eastern equine encephalitis virus [23]
- Saccharolobus solfataricus [23]
- Strongylocentrotus purpuratus [23]
- Escherichia coli [23]
- Streptococcus thermophilus [22]
- Clostridium perfringens [22]
- Porphyridium purpureum [22]
- African swine fever virus [21]
- Mycobacterium phage bxb1 [21]
- Escherichia coli [21]
- Shigella flexneri [21]
- Trichoplusia ni [21]
- Dna molecule [20]
EM Method
- Single-particle [18466]
- Helical reconstruction [890]
- Subtomogram averaging [274]
- Electron Crystallography [95]
- Tomography [55]
Resolution
- < 2Å [223]
- ≥ 2Å and < 3Å [5170]
- ≥ 3Å and < 4Å [9711]
- ≥ 4Å and < 5Å [2187]
- ≥ 5Å and < 6Å [462]
- ≥ 6Å and < 8Å [757]
- ≥ 8Å and < 12Å [508]
- ≥ 12Å and < 16Å [154]
- ≥ 16Å and < 20Å [124]
- ≥ 20Å and < 30Å [289]
- ≥ 30Å [107]
Model molecular weight
- 0-50 kDa [285]
- 50-100 kDa [949]
- 100-250 kDa [4535]
- 250-500 kDa [3944]
- 500-1000 kDa [2133]
- 1-2 MDa [1047]
- 2-5 MDa [1226]
- 5-10 MDa [270]
- > 10 MDa [209]
Release Date
- 2026 [692]
- 2025 [5012]
- 2024 [4163]
- 2023 [2905]
- 2022 [2349]
- 2021 [1718]
- 2020 [1442]
- 2019 [890]
- 2018 [412]
- 2017 [255]
- 2016 [177]
- 2015 [62]
- 2014 [50]
- 2013 [36]
- 2012 [20]
- 2011 [22]
- 2010 [17]
- 2009 [13]
- 2007 [11]
- 2006 [18]
- 2005 [5]
- 2003 [1]
- 2002 [2]
Author by name
- Liu Y [452]
- Zhang Y [422]
- Zhang X [411]
- Wang Y [391]
- Li Y [374]
- Wang X [366]
- Gao Y [328]
- Ward AB [321]
- Li Z [307]
- Wang J [306]
- Zhang Z [299]
- Wang H [276]
- Zhang L [275]
- Zhang J [264]
- Li X [261]
- Li H [252]
- Zhao Y [240]
- Liu S [235]
- Skiniotis G [235]
- Wang L [231]
- Chen Y [222]
- Lyumkis D [222]
- Li S [219]
- Marks AR [219]
- Zhou ZH [207]
- Zhang S [202]
- Miotto MC [197]
- Yuan Q [193]
- Chen J [192]
- Papasergi-scott MM [192]
- Seven AB [189]
- He F [185]
- Gmeiner P [184]
- Li J [184]
- Shi Y [182]
- Hu Y [178]
- Kobilka BK [177]
- Yang Y [176]
- Beckmann R [175]
- Panova O [174]
- Li W [172]
- Liu C [172]
- Dridi H [171]
- Reiken S [171]
- Xu Y [171]
- Zhang H [171]
- Weninger G [170]
- Rubinstein JL [167]
- Hilger D [165]
- Klinge S [163]
- Xu C [163]
- Hildebrand PW [162]
- Liu X [162]
- Wang Q [161]
- Wang Z [161]
- Batebi H [160]
- Brown A [160]
- Casiraghi M [160]
- Eskici G [160]
- Maul L [160]
- Perez-hernandez G [160]
- Tchagou C [160]
- Chen X [158]
- Liu Z [158]
- Liu L [156]
- Wu M [156]
- Wang C [151]
- Williamson JR [151]
- Zhu X [151]
- Vanden Broeck A [150]
- Chen Z [149]
- Cramer P [149]
- Liu J [148]
- Lee J [147]
- Wronska A [147]
- Zhang R [145]
- Zhou L [145]
- Chen M [144]
- Zhu Y [144]
- Wang M [143]
- Zhou J [142]
- Kwong PD [140]
- Zhang W [139]
- Zhou Y [139]
- Dong X [138]
- Yang F [138]
- Du J [136]
- Wang CH [136]
- Zhang C [135]
- Zhang B [134]
- Yang Z [133]
- Ho MC [132]
- Smith J [132]
- Urlaub H [132]
- Wu J [132]
- Zhao J [132]
- Ranson NA [131]
- Doran MH [130]
- Han S [130]
- Berninghausen O [128]
Author by ORCID
- Skiniotis G [225]
- Gao Y [194]
- Papasergi-scott MM [184]
- He F [183]
- Gmeiner P [180]
- Lyumkis D [177]
- Kobilka BK [174]
- Hilger D [161]
- Ward AB [160]
- Batebi H [160]
- Panova O [160]
- Perez-hernandez G [160]
- Hildebrand PW [160]
- Brown A [157]
- Klinge S [157]
- Zhou ZH [154]
- Miotto MC [152]
- Vanden Broeck A [146]
- Zhou L [131]
- Doran MH [127]
- Beckmann R [126]
- Weninger G [125]
- Kishikawa JI [121]
- Beneke T [120]
- Wheeler RJ [120]
- Gluenz E [120]
- Fochler S [120]
- Kwong PD [117]
- Fuzik T [107]
- Raunser S [106]
- Ranson NA [104]
- Hu Y [104]
- Rubinstein JL [103]
- Plevka P [103]
- Williamson JR [101]
- Wronska A [101]
- Letts JA [99]
- Kotecha A [97]
- Hummer G [96]
- Du J [96]
- Chiu W [95]
- Hardwick SW [92]
- Gao GF [89]
- Venugopal H [87]
- Xia X [87]
- Lu W [87]
- Amunts A [86]
- Aricescu AR [86]
- Fort C [85]
- Chirgadze DY [83]
- Sazanov LA [83]
- Cheng J [83]
- Dridi H [82]
- Scheres SHW [82]
- Hite RK [82]
- Itoh Y [80]
- Cheng Y [80]
- Lee SY [79]
- Baker D [78]
- Yokoyama K [78]
- Edwards RJ [78]
- Teng F [77]
- Malinauskas T [76]
- Aiyer S [75]
- Yang F [75]
- Wang CH [75]
- Lander GC [75]
- Borgnia MJ [73]
- Cramer P [72]
- Marks AR [72]
- Hattne J [72]
- Frost A [72]
- Gil-carton D [72]
- Chang YC [71]
- Martynowycz MW [71]
- Dutzler R [70]
- Steyaert J [70]
- Torres JL [70]
- Urlaub H [70]
- Stahlberg H [69]
- Hillen HS [68]
- Tan YZ [67]
- Cottrell CA [67]
- Arragain B [67]
- Paulino C [66]
- Zhou R [66]
- Goedert M [65]
- Hallberg BM [65]
- Berninghausen O [65]
- Wu M [65]
- Zhou J [65]
- Tian H [65]
- Yang Y [65]
- Zhang S [65]
- He Z [65]
- Han F [65]
- Li N [65]
- Hurley JH [64]
- Rosenthal PB [64]
- Ho MC [64]
Journal
- NAT COMMUN [4215]
- TO BE PUBLISHED [1904]
- NATURE [1803]
- NAT STRUCT MOL BIOL [1319]
- BIORXIV [1130]
- SCIENCE [1097]
- PNAS [1079]
- SCI ADV [771]
- MOL CELL [720]
- ELIFE [651]
- CELL [635]
- STRUCTURE [474]
- CELL REP [405]
- NUCLEIC ACIDS RES [362]
- COMMUN BIOL [276]
- NAT CHEM BIOL [216]
- CELL RES [210]
- ACTA CRYSTALLOGR D STRUCT BIOL [196]
- EMBO J [196]
- J BIOL CHEM [192]
- J MOL BIOL [160]
- J VIROL [145]
- NAT MICROBIOL [142]
- PLOS PATHOG [121]
- J STRUCT BIOL [99]
- CELL DISCOV [91]
- J AM CHEM SOC [86]
- PROTEIN SCI [83]
- SCI REP [82]
- PLOS BIOL [78]
- MBIO [77]
- IMMUNITY [73]
- NAT METHODS [67]
- EMBO REP [66]
- CELL HOST MICROBE [63]
- NAT PLANTS [63]
- J STRUCT BIOL X [60]
- SCI TRANSL MED [55]
- ISCIENCE [52]
- J CLIN INV [51]
- NEURON [44]
- LIFE SCI ALLIANCE [41]
- RES SQ [40]
- INT J MOL SCI [38]
- VIRUSES [38]
- ACS NANO [34]
- J MED CHEM [34]
- EBIOMEDICINE [33]
- PNAS NEXUS [33]
- PROTEIN CELL [33]
- FEBS J [30]
- PLOS ONE [29]
- BIOCHEMISTRY [27]
- BLOOD [27]
- COMMUN CHEM [27]
- DEV CELL [27]
- IUCRJ [26]
- ACTA NEUROPATHOL [25]
- SCI IMMUNOL [25]
- CURR BIOL [23]
- J.MOL.CELL.CARDIOL. [23]
- NPJ VACCINES [23]
- ANGEW CHEM INT ED ENGL [21]
- FEBS LETT [21]
- INT J BIOL MACROMOL [20]
- J CELL BIOL [20]
- ACS CENT SCI [19]
- FRONT MOL BIOSCI [19]
- NATL SCI REV [18]
- RNA [18]
- SIGNAL TRANSDUCT TARGET THER [18]
- NAT NEUROSCI [17]
- PLANT COMMUN. [17]
- ACS CHEM BIOL [16]
- ADV SCI [16]
- MOL PLANT [16]
- NAT CELL BIOL [16]
- ACTA CRYSTALLOGR F STRUCT BIOL COMMUN [15]
- BIOCHEM J [15]
- NAT IMMUNOL [15]
- GENES DEV [14]
- BIOCHEM BIOPHYS RES COMMUN [13]
- MOL MICROBIOL [13]
- ACTA PHARMACOL.SIN. [12]
- BIOMOLECULES [12]
- FRONT IMMUNOL [12]
- J EXP MED [12]
- NAT CHEM [12]
- CELL REP MED [11]
- NAT CATAL [11]
- BIOPHYS J [10]
- CELL REP PHYS SCI [10]
- NAT CARDIOVASC RES [10]
- NAT NANOTECHNOL [10]
- SMALL [10]
- CELL DEATH DIFFER. [9]
- FASEB J [9]
- FRONT MICROBIOL [9]
- GLIA [9]
- MICROBIOL SPECTR [9]
Software
- CRYOSPARC [7573]
- RELION [6196]
- CTFFIND [978]
- GCTF [367]
- CISTEM [261]
- COOT [179]
- FREALIGN [163]
- PHENIX [126]
- WARP [121]
- SPIDER [86]
- EMAN [85]
- EMAN2 [75]
- CRYOLO [74]
- UCSF CHIMERAX [71]
- IMOD [63]
- DYNAMO [59]
- UCSF CHIMERA [55]
- SPHIRE [51]
- AIMLESS [43]
- CHIMERA [42]
- MATLAB [36]
- XMIPP [35]
- JSPR [34]
- APPION [28]
- ISOLDE [23]
- AV3 [18]
- CTFTILT [18]
- IMAGIC [17]
- PEET [17]
- PYTOM [17]
- SIMPLE [17]
- MOLREP [15]
- POINTLESS [15]
- AUTO3DEM [13]
- EMAN1 [11]
- SCIPION [11]
- EMCLARITY [10]
- FREALIX [10]
- REFMAC [10]
- TOPAZ [10]
- EMAN1, EMAN2 [9]
- EMAN1, FREALIGN [9]
- FOCUS [9]
- IHRSR [9]
- SPIDER, FREALIGN [9]
- TOM TOOLBOX [9]
- MPSA [7]
- SPARX [7]
- SPRING [7]
- TOM [7]
- EMAN2, SPIDER, BESPOKE-2D-ALIGNMENT, BESPOKE-X-AND-Y-SHIFTING [6]
- IMAGIC-5 [6]
- CTFFIND3 [5]
- CTFFIND4 [5]
- CTFPHASEFLIP [5]
- EMAN2, RELION1.2 [5]
- EMREADY [5]
- IMAGIC, SPIDER [5]
- IMIRS [5]
- J3DR [5]
- MPSA, EMAN, EMAN2 [5]
- PHASER [5]
- SITUS [5]
- UNBLUR, CTFFIND4, FREALIGN [5]
- CCP4 PACKAGE [4]
- JSPR, EMAN, EMAN2 [4]
- RSREF2.0 [4]
- SPIDER PACKAGE [4]
- SPIDER, EMAN [4]
- STOPGAP [4]
- XDS [4]
- XMIPP, FREALIGN [4]
- XSCALE [4]
- AMIRAFPM [3]
- CHIMERA, FLEX-EM [3]
- CHIMERA, FLEX-EM, MODELLER, TEMPY [3]
- CHIMERA, SITUS [3]
- CTFFIND4, RELION, BSOFT [3]
- EMAN2/SPARX [3]
- EMPFT, POR, P3DR [3]
- IMAGIC-5, SPIDER [3]
- JALIGN [3]
- MODELLER, CHIMERA, FLEX-EM [3]
- NOVACTF [3]
- PFT EM3DR [3]
- SITUS,CHIMERA [3]
- SUBTOM [3]
- CHIMERA, COOT [2]
- CHIMERA, FLEXEM [2]
- CHIMERA, VEDA UROX , MODELLER FLEX-EM [2]
- CTFFIND4, SIMPLE, EMAN2, RELION [2]
- EM3DR2, P3DR [2]
- EMAN, EMAN2 [2]
- EMAN, SPIDER [2]
- EMBL-ICOS, MRC [2]
- ETOMO [2]
- FLEX-EM [2]
- IMAGIC SPIDER [2]
- IMAGIC, FREALIGN AND SPIDER [2]
- IMAGIC, RELION [2]
Microscope
- FEI TITAN KRIOS [11850]
- TFS KRIOS [4636]
- FEI TALOS ARCTICA [1000]
- TFS GLACIOS [721]
- FEI POLARA 300 [258]
- JEOL CRYO ARM 300 [253]
- FEI TECNAI F20 [193]
- FEI TITAN [152]
- FEI TECNAI ARCTICA [126]
- FEI TECNAI F30 [95]
- TFS TALOS [89]
- FEI TECNAI SPIRIT [78]
- FEI TECNAI 20 [58]
- JEOL 3200FSC [38]
- FEI TECNAI 12 [37]
- JEOL CRYO ARM 200 [37]
- FEI/PHILIPS CM300FEG/T [20]
- FEI/PHILIPS CM200FEG [16]
- JEOL 2100F [15]
- JEOL 2010F [14]
- JEOL 1230 [10]
- JEOL 1400/HR YPS FEG [10]
- FEI/PHILIPS EM420 [9]
- JEOL 2200FS [9]
- JEOL 3200FS [8]
- TFS TALOS F200C [7]
- TFS TALOS L120C [7]
- JEOL 1400 [5]
- TFS TITAN THEMIS [5]
- FEI MORGAGNI [4]
- FEI/PHILIPS CM120T [4]
- JEOL 2100 [4]
- JEOL 2200FSC [4]
- JEOL 3100FFC [4]
- FEI/PHILIPS CM200T [3]
- JEOL 3000SFF [3]
- FEI/PHILIPS CM200FEG/ST [2]
- FEI TECNAI SPHERA [1]
- FEI/PHILIPS CM12 [1]
- FEI/PHILIPS CM300FEG/HE [1]
- HITACHI H-9500SD [1]
- JEOL 1200EX [1]
- JEOL 1200EXII [1]
- JEOL 4000 [1]
- JEOL KYOTO-3000SFF [1]
- SHUIMU TOTEM 300S [1]
- TFS TUNDRA [1]
Electron Source
- FIELD EMISSION GUN [19495]
- LAB6 [185]
- OTHER [81]
- TUNGSTEN HAIRPIN [19]
Film or detector model
- GATAN K3 6K X 4K [5521]
- GATAN K3 BIOQUANTUM 6K X 4K [4743]
- GATAN K2 SUMMIT 4K X 4K [3749]
- FEI FALCON IV 4K X 4K [2110]
- FEI FALCON III 4K X 4K [1364]
- GATAN K2 QUANTUM 4K X 4K [601]
- TFS FALCON 4I 4K X 4K [450]
- FEI FALCON II 4K X 4K [341]
- GATAN K3 BIOCONTINUUM 6K X 4K [174]
- GATAN ULTRASCAN 4000 4K X 4K [118]
- KODAK SO-163 FILM [92]
- OTHER [85]
- FEI CETA 4K X 4K [72]
- FEI EAGLE 4K X 4K [63]
- TVIPS TEMCAM-F416 4K X 4K [59]
- GATAN K2 BASE 4K X 4K [52]
- GATAN K2 4K X 4K [35]
- DIRECT ELECTRON DE-20 5K X 3K [25]
- FEI EAGLE 2K X 2K [25]
- DIRECT ELECTRON DE-64 8K X 8K [16]
- DIRECT ELECTRON APOLLO 4K X 4K [13]
- GATAN ULTRASCAN 1000 2K X 2K [12]
- GENERIC GATAN 4K X 4K [11]
- TVIPS TEMCAM-F415 4K X 4K [11]
- DECTRIS SINGLA 1K X 1K [10]
- FEI FALCON I 4K X 4K [10]
- DIRECT ELECTRON DE-10 5K X 4K [9]
- GATAN K2 IS 4K X 4K [8]
- GENERIC CCD [5]
- TVIPS TEMCAM-F816 8K X 8K [5]
- DIRECT ELECTRON DE-16 4K X 4K [4]
- TVIPS TEMCAM-F224 2K X 2K [4]
- DIRECT ELECTRON DE-12 4K X 3K [3]
- GATAN ALPINE 2.3K X 3.2K [3]
- KODAK 4489 FILM [3]
- GATAN ULTRASCAN 10000 10K X 10K [2]
- GENERIC TVIPS [2]
- GENERIC TVIPS 2K X 2K [2]
- GENERIC TVIPS 4K X 4K [2]
- GATAN MULTISCAN [1]
- GATAN ORIUS SC1000 4K X 2.7K [1]
- GATAN ORIUS SC200 2K X 2K [1]
- GENERIC FILM [1]
- GENERIC GATAN 2K X 2K [1]
EMPIAR Experiment type
- EMDB [450]
- FIB-SEM [23]
- CLEM [8]
- SBF-SEM [6]
- EXCEPTION [3]
- SSET [2]
EMPIAR Image category
- MICROGRAPHS - MULTIFRAME [396]
- MICROGRAPHS - SINGLE FRAME [125]
- PICKED PARTICLES - SINGLE FRAME - PROCESSED [27]
- TILT SERIES [24]
- RECONSTRUCTED VOLUMES [17]
- PICKED PARTICLES - MULTIFRAME - PROCESSED [10]
- PICKED PARTICLES - SINGLE FRAME - UNPROCESSED [6]
- PICKED PARTICLES - MULTIFRAME - UNPROCESSED [5]
- SUBTOMOGRAMS [2]
- MODEL [1]
- STITCHED MAPS [1]
External links
- UniProt [15094]
- PDB [14682]
- PDBe-Kb [14000]
- AlphaFold DB [12805]
- InterPro [12115]
- Gene Ontology [11413]
- Pfam [10867]
- ChEBI [9231]
- ChEMBL [8411]
- DrugBank [7554]
- Complex Portal [4543]
- EMPIAR [2241]
- EMDB [449]
- SCOP2 [301]
- CATH [169]
- BioImage Archive [8]
Release date: Feb. 26, 2026
Dataset size: 3.4 TB
Experiment type: EMDB
Dataset size: 3.4 TB
Experiment type: EMDB
Srnko M, Šolinc G, Crnković A, Merzel F, Jordan M, Wallace EJ, Podobnik M, Anderluh G
ACS sensors (2026) [ Pubmed: 41718555 DOI: 10.1021/acssensors.5c03533 ]
Image sets:
- Unaligned multi-frame micrographs of RN1-Fav pores extracted from DOPC:SM membranes
Li H, Klein D
To Be Published
Liu S, Gad M, Li C, Cho K, Wangdu K, Liu Y, Millet A, Kojima H, Urnavicius L, Patti G, Belay V, Vinogradova K, Hite RK, Birsoy K
To Be Published
Taveneau C, Chai XH, D'Silva J, Bamert RS, Hayes BK, Calvert RW, Curwen DJ, Munder F, Martin LL, Barr JJ, Grinter R, Knott GJ
To Be Published
Release date: Feb. 25, 2026
Resolution: 3.23 Å
EM Method: Single-particle
Resolution: 3.23 Å
EM Method: Single-particle
Liu S, Gad M, Li C, Cho K, Wangdu K, Liu Y, Millet A, Kojima H, Urnavicius L, Patti G, Belay V, Vinogradova K, Hite RK, Birsoy K
To Be Published
Sharma N, Zhou W, French JB
Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-69423-y Pubmed: 41688441 ]
Sharma N, Zhou W, French JB
Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-69423-y ]
Sharma N, Zhou W, French JB
Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-69423-y ]
Neumann B, Gonen S
To Be Published
Richman DE, Wendorff TJ, Rashid F, Beck C, Yan Q, Johnson HR, Eckerty RA, Fogg JM, Baker ML, Zechiedrich L, Berger JM
To Be Published
Filter By
Current Database
- EMDB [19780]
- EMPIAR [492]
Current status
- REL [20272]
Sample type
- Complex [17535]
- Protein [15978]
- Ligand [9884]
- RNA [2185]
- DNA [1434]
- Virus [1017]
- Cellular component [889]
- Sample [280]
- Cell [191]
- Tissue [106]
- Other [80]
Organism
- Homo sapiens [8013]
- Synthetic construct [1236]
- Mus musculus [1146]
- Escherichia coli [1009]
- Severe acute respiratory syndrome coronavirus [896]
- Saccharomyces cerevisiae [885]
- Escherichia coli [545]
- Rattus norvegicus [493]
- Human immunodeficiency virus 1 [346]
- Oryctolagus cuniculus [333]
- Sus scrofa [316]
- Saccharomyces cerevisiae [306]
- Lama glama [285]
- Bos taurus [279]
- Xenopus laevis [217]
- Arabidopsis thaliana [189]
- Leishmania tarentolae [128]
- Mycolicibacterium smegmatis [125]
- Bacillus subtilis [121]
- Mycobacterium tuberculosis [110]
- Influenza a virus [102]
- Macaca mulatta [100]
- Escherichia coli [94]
- Gallus gallus [92]
- Danio rerio [90]
- Staphylococcus aureus [87]
- Drosophila melanogaster [85]
- Pseudomonas aeruginosa [83]
- Chlamydomonas reinhardtii [70]
- Chaetomium thermophilum [70]
- Ovis aries [68]
- Trypanosoma brucei [65]
- Caenorhabditis elegans [63]
- Enterobacteria phage t4 [60]
- Vicugna pacos [60]
- Thermus thermophilus [59]
- Mycobacterium tuberculosis [56]
- Pseudomonas aeruginosa [55]
- Bacillus sp. (strain ps3) [54]
- Chaetomium thermophilum [51]
- Tetrahymena thermophila [49]
- Severe acute respiratory syndrome coronavirus [48]
- Plasmodium falciparum [47]
- Lassa mammarenavirus [46]
- Parengyodontium album [46]
- Schizosaccharomyces pombe [45]
- Bacillus subtilis [44]
- Mycoplasma pneumoniae [42]
- Spinacia oleracea [41]
- Clostridioides difficile [40]
- Trypanosoma brucei [39]
- Aequorea victoria [38]
- Cricetulus griseus [37]
- Legionella pneumophila [36]
- Plasmodium falciparum [36]
- Torpedo marmorata [36]
- Saccharomyces cerevisiae [35]
- Vibrio cholerae [35]
- Simian virus 40 [34]
- Salpingoeca rosetta (strain atcc 50818 / bsb-021) [34]
- Macaca fascicularis [34]
- Salmonella enterica [34]
- Dictyostelium discoideum [33]
- Pyrococcus furiosus [32]
- Anthocerotibacter panamensis [32]
- Human herpesvirus 1 [31]
- Escherichia virus t7 [31]
- Rous sarcoma virus [30]
- Adeno-associated dependoparvovirus a [29]
- Euglena gracilis [29]
- Thermococcus profundus [29]
- Klebsiella pneumoniae [29]
- Mycolicibacterium smegmatis [28]
- Escherichia coli [28]
- (no species) [28]
- Influenza a virus [27]
- Clostridium botulinum [26]
- Enterobacteria phage t4 [26]
- Hepatitis b virus [25]
- Acetivibrio thermocellus [25]
- Aquifex aeolicus [25]
- Azotobacter vinelandii [25]
- Oryza sativa [25]
- Salmonella enterica [25]
- Listeria innocua [24]
- Azotobacter vinelandii [24]
- Human immunodeficiency virus 1 [24]
- Eastern equine encephalitis virus [23]
- Saccharolobus solfataricus [23]
- Strongylocentrotus purpuratus [23]
- Escherichia coli [23]
- Streptococcus thermophilus [22]
- Clostridium perfringens [22]
- Porphyridium purpureum [22]
- African swine fever virus [21]
- Mycobacterium phage bxb1 [21]
- Escherichia coli [21]
- Shigella flexneri [21]
- Trichoplusia ni [21]
- Dna molecule [20]
EM Method
- Single-particle [18466]
- Helical reconstruction [890]
- Subtomogram averaging [274]
- Electron Crystallography [95]
- Tomography [55]
Resolution
- < 2Å [223]
- ≥ 2Å and < 3Å [5170]
- ≥ 3Å and < 4Å [9711]
- ≥ 4Å and < 5Å [2187]
- ≥ 5Å and < 6Å [462]
- ≥ 6Å and < 8Å [757]
- ≥ 8Å and < 12Å [508]
- ≥ 12Å and < 16Å [154]
- ≥ 16Å and < 20Å [124]
- ≥ 20Å and < 30Å [289]
- ≥ 30Å [107]
Model molecular weight
- 0-50 kDa [285]
- 50-100 kDa [949]
- 100-250 kDa [4535]
- 250-500 kDa [3944]
- 500-1000 kDa [2133]
- 1-2 MDa [1047]
- 2-5 MDa [1226]
- 5-10 MDa [270]
- > 10 MDa [209]
Release Date
- 2026 [692]
- 2025 [5012]
- 2024 [4163]
- 2023 [2905]
- 2022 [2349]
- 2021 [1718]
- 2020 [1442]
- 2019 [890]
- 2018 [412]
- 2017 [255]
- 2016 [177]
- 2015 [62]
- 2014 [50]
- 2013 [36]
- 2012 [20]
- 2011 [22]
- 2010 [17]
- 2009 [13]
- 2007 [11]
- 2006 [18]
- 2005 [5]
- 2003 [1]
- 2002 [2]
Author by name
- Liu Y [452]
- Zhang Y [422]
- Zhang X [411]
- Wang Y [391]
- Li Y [374]
- Wang X [366]
- Gao Y [328]
- Ward AB [321]
- Li Z [307]
- Wang J [306]
- Zhang Z [299]
- Wang H [276]
- Zhang L [275]
- Zhang J [264]
- Li X [261]
- Li H [252]
- Zhao Y [240]
- Liu S [235]
- Skiniotis G [235]
- Wang L [231]
- Chen Y [222]
- Lyumkis D [222]
- Li S [219]
- Marks AR [219]
- Zhou ZH [207]
- Zhang S [202]
- Miotto MC [197]
- Yuan Q [193]
- Chen J [192]
- Papasergi-scott MM [192]
- Seven AB [189]
- He F [185]
- Gmeiner P [184]
- Li J [184]
- Shi Y [182]
- Hu Y [178]
- Kobilka BK [177]
- Yang Y [176]
- Beckmann R [175]
- Panova O [174]
- Li W [172]
- Liu C [172]
- Dridi H [171]
- Reiken S [171]
- Xu Y [171]
- Zhang H [171]
- Weninger G [170]
- Rubinstein JL [167]
- Hilger D [165]
- Klinge S [163]
- Xu C [163]
- Hildebrand PW [162]
- Liu X [162]
- Wang Q [161]
- Wang Z [161]
- Batebi H [160]
- Brown A [160]
- Casiraghi M [160]
- Eskici G [160]
- Maul L [160]
- Perez-hernandez G [160]
- Tchagou C [160]
- Chen X [158]
- Liu Z [158]
- Liu L [156]
- Wu M [156]
- Wang C [151]
- Williamson JR [151]
- Zhu X [151]
- Vanden Broeck A [150]
- Chen Z [149]
- Cramer P [149]
- Liu J [148]
- Lee J [147]
- Wronska A [147]
- Zhang R [145]
- Zhou L [145]
- Chen M [144]
- Zhu Y [144]
- Wang M [143]
- Zhou J [142]
- Kwong PD [140]
- Zhang W [139]
- Zhou Y [139]
- Dong X [138]
- Yang F [138]
- Du J [136]
- Wang CH [136]
- Zhang C [135]
- Zhang B [134]
- Yang Z [133]
- Ho MC [132]
- Smith J [132]
- Urlaub H [132]
- Wu J [132]
- Zhao J [132]
- Ranson NA [131]
- Doran MH [130]
- Han S [130]
- Berninghausen O [128]
Author by ORCID
- Skiniotis G [225]
- Gao Y [194]
- Papasergi-scott MM [184]
- He F [183]
- Gmeiner P [180]
- Lyumkis D [177]
- Kobilka BK [174]
- Hilger D [161]
- Ward AB [160]
- Batebi H [160]
- Panova O [160]
- Perez-hernandez G [160]
- Hildebrand PW [160]
- Brown A [157]
- Klinge S [157]
- Zhou ZH [154]
- Miotto MC [152]
- Vanden Broeck A [146]
- Zhou L [131]
- Doran MH [127]
- Beckmann R [126]
- Weninger G [125]
- Kishikawa JI [121]
- Beneke T [120]
- Wheeler RJ [120]
- Gluenz E [120]
- Fochler S [120]
- Kwong PD [117]
- Fuzik T [107]
- Raunser S [106]
- Ranson NA [104]
- Hu Y [104]
- Rubinstein JL [103]
- Plevka P [103]
- Williamson JR [101]
- Wronska A [101]
- Letts JA [99]
- Kotecha A [97]
- Hummer G [96]
- Du J [96]
- Chiu W [95]
- Hardwick SW [92]
- Gao GF [89]
- Venugopal H [87]
- Xia X [87]
- Lu W [87]
- Amunts A [86]
- Aricescu AR [86]
- Fort C [85]
- Chirgadze DY [83]
- Sazanov LA [83]
- Cheng J [83]
- Dridi H [82]
- Scheres SHW [82]
- Hite RK [82]
- Itoh Y [80]
- Cheng Y [80]
- Lee SY [79]
- Baker D [78]
- Yokoyama K [78]
- Edwards RJ [78]
- Teng F [77]
- Malinauskas T [76]
- Aiyer S [75]
- Yang F [75]
- Wang CH [75]
- Lander GC [75]
- Borgnia MJ [73]
- Cramer P [72]
- Marks AR [72]
- Hattne J [72]
- Frost A [72]
- Gil-carton D [72]
- Chang YC [71]
- Martynowycz MW [71]
- Dutzler R [70]
- Steyaert J [70]
- Torres JL [70]
- Urlaub H [70]
- Stahlberg H [69]
- Hillen HS [68]
- Tan YZ [67]
- Cottrell CA [67]
- Arragain B [67]
- Paulino C [66]
- Zhou R [66]
- Goedert M [65]
- Hallberg BM [65]
- Berninghausen O [65]
- Wu M [65]
- Zhou J [65]
- Tian H [65]
- Yang Y [65]
- Zhang S [65]
- He Z [65]
- Han F [65]
- Li N [65]
- Hurley JH [64]
- Rosenthal PB [64]
- Ho MC [64]
Journal
- NAT COMMUN [4215]
- TO BE PUBLISHED [1904]
- NATURE [1803]
- NAT STRUCT MOL BIOL [1319]
- BIORXIV [1130]
- SCIENCE [1097]
- PNAS [1079]
- SCI ADV [771]
- MOL CELL [720]
- ELIFE [651]
- CELL [635]
- STRUCTURE [474]
- CELL REP [405]
- NUCLEIC ACIDS RES [362]
- COMMUN BIOL [276]
- NAT CHEM BIOL [216]
- CELL RES [210]
- ACTA CRYSTALLOGR D STRUCT BIOL [196]
- EMBO J [196]
- J BIOL CHEM [192]
- J MOL BIOL [160]
- J VIROL [145]
- NAT MICROBIOL [142]
- PLOS PATHOG [121]
- J STRUCT BIOL [99]
- CELL DISCOV [91]
- J AM CHEM SOC [86]
- PROTEIN SCI [83]
- SCI REP [82]
- PLOS BIOL [78]
- MBIO [77]
- IMMUNITY [73]
- NAT METHODS [67]
- EMBO REP [66]
- CELL HOST MICROBE [63]
- NAT PLANTS [63]
- J STRUCT BIOL X [60]
- SCI TRANSL MED [55]
- ISCIENCE [52]
- J CLIN INV [51]
- NEURON [44]
- LIFE SCI ALLIANCE [41]
- RES SQ [40]
- INT J MOL SCI [38]
- VIRUSES [38]
- ACS NANO [34]
- J MED CHEM [34]
- EBIOMEDICINE [33]
- PNAS NEXUS [33]
- PROTEIN CELL [33]
- FEBS J [30]
- PLOS ONE [29]
- BIOCHEMISTRY [27]
- BLOOD [27]
- COMMUN CHEM [27]
- DEV CELL [27]
- IUCRJ [26]
- ACTA NEUROPATHOL [25]
- SCI IMMUNOL [25]
- CURR BIOL [23]
- J.MOL.CELL.CARDIOL. [23]
- NPJ VACCINES [23]
- ANGEW CHEM INT ED ENGL [21]
- FEBS LETT [21]
- INT J BIOL MACROMOL [20]
- J CELL BIOL [20]
- ACS CENT SCI [19]
- FRONT MOL BIOSCI [19]
- NATL SCI REV [18]
- RNA [18]
- SIGNAL TRANSDUCT TARGET THER [18]
- NAT NEUROSCI [17]
- PLANT COMMUN. [17]
- ACS CHEM BIOL [16]
- ADV SCI [16]
- MOL PLANT [16]
- NAT CELL BIOL [16]
- ACTA CRYSTALLOGR F STRUCT BIOL COMMUN [15]
- BIOCHEM J [15]
- NAT IMMUNOL [15]
- GENES DEV [14]
- BIOCHEM BIOPHYS RES COMMUN [13]
- MOL MICROBIOL [13]
- ACTA PHARMACOL.SIN. [12]
- BIOMOLECULES [12]
- FRONT IMMUNOL [12]
- J EXP MED [12]
- NAT CHEM [12]
- CELL REP MED [11]
- NAT CATAL [11]
- BIOPHYS J [10]
- CELL REP PHYS SCI [10]
- NAT CARDIOVASC RES [10]
- NAT NANOTECHNOL [10]
- SMALL [10]
- CELL DEATH DIFFER. [9]
- FASEB J [9]
- FRONT MICROBIOL [9]
- GLIA [9]
- MICROBIOL SPECTR [9]
Software
- CRYOSPARC [7573]
- RELION [6196]
- CTFFIND [978]
- GCTF [367]
- CISTEM [261]
- COOT [179]
- FREALIGN [163]
- PHENIX [126]
- WARP [121]
- SPIDER [86]
- EMAN [85]
- EMAN2 [75]
- CRYOLO [74]
- UCSF CHIMERAX [71]
- IMOD [63]
- DYNAMO [59]
- UCSF CHIMERA [55]
- SPHIRE [51]
- AIMLESS [43]
- CHIMERA [42]
- MATLAB [36]
- XMIPP [35]
- JSPR [34]
- APPION [28]
- ISOLDE [23]
- AV3 [18]
- CTFTILT [18]
- IMAGIC [17]
- PEET [17]
- PYTOM [17]
- SIMPLE [17]
- MOLREP [15]
- POINTLESS [15]
- AUTO3DEM [13]
- EMAN1 [11]
- SCIPION [11]
- EMCLARITY [10]
- FREALIX [10]
- REFMAC [10]
- TOPAZ [10]
- EMAN1, EMAN2 [9]
- EMAN1, FREALIGN [9]
- FOCUS [9]
- IHRSR [9]
- SPIDER, FREALIGN [9]
- TOM TOOLBOX [9]
- MPSA [7]
- SPARX [7]
- SPRING [7]
- TOM [7]
- EMAN2, SPIDER, BESPOKE-2D-ALIGNMENT, BESPOKE-X-AND-Y-SHIFTING [6]
- IMAGIC-5 [6]
- CTFFIND3 [5]
- CTFFIND4 [5]
- CTFPHASEFLIP [5]
- EMAN2, RELION1.2 [5]
- EMREADY [5]
- IMAGIC, SPIDER [5]
- IMIRS [5]
- J3DR [5]
- MPSA, EMAN, EMAN2 [5]
- PHASER [5]
- SITUS [5]
- UNBLUR, CTFFIND4, FREALIGN [5]
- CCP4 PACKAGE [4]
- JSPR, EMAN, EMAN2 [4]
- RSREF2.0 [4]
- SPIDER PACKAGE [4]
- SPIDER, EMAN [4]
- STOPGAP [4]
- XDS [4]
- XMIPP, FREALIGN [4]
- XSCALE [4]
- AMIRAFPM [3]
- CHIMERA, FLEX-EM [3]
- CHIMERA, FLEX-EM, MODELLER, TEMPY [3]
- CHIMERA, SITUS [3]
- CTFFIND4, RELION, BSOFT [3]
- EMAN2/SPARX [3]
- EMPFT, POR, P3DR [3]
- IMAGIC-5, SPIDER [3]
- JALIGN [3]
- MODELLER, CHIMERA, FLEX-EM [3]
- NOVACTF [3]
- PFT EM3DR [3]
- SITUS,CHIMERA [3]
- SUBTOM [3]
- CHIMERA, COOT [2]
- CHIMERA, FLEXEM [2]
- CHIMERA, VEDA UROX , MODELLER FLEX-EM [2]
- CTFFIND4, SIMPLE, EMAN2, RELION [2]
- EM3DR2, P3DR [2]
- EMAN, EMAN2 [2]
- EMAN, SPIDER [2]
- EMBL-ICOS, MRC [2]
- ETOMO [2]
- FLEX-EM [2]
- IMAGIC SPIDER [2]
- IMAGIC, FREALIGN AND SPIDER [2]
- IMAGIC, RELION [2]
Microscope
- FEI TITAN KRIOS [11850]
- TFS KRIOS [4636]
- FEI TALOS ARCTICA [1000]
- TFS GLACIOS [721]
- FEI POLARA 300 [258]
- JEOL CRYO ARM 300 [253]
- FEI TECNAI F20 [193]
- FEI TITAN [152]
- FEI TECNAI ARCTICA [126]
- FEI TECNAI F30 [95]
- TFS TALOS [89]
- FEI TECNAI SPIRIT [78]
- FEI TECNAI 20 [58]
- JEOL 3200FSC [38]
- FEI TECNAI 12 [37]
- JEOL CRYO ARM 200 [37]
- FEI/PHILIPS CM300FEG/T [20]
- FEI/PHILIPS CM200FEG [16]
- JEOL 2100F [15]
- JEOL 2010F [14]
- JEOL 1230 [10]
- JEOL 1400/HR YPS FEG [10]
- FEI/PHILIPS EM420 [9]
- JEOL 2200FS [9]
- JEOL 3200FS [8]
- TFS TALOS F200C [7]
- TFS TALOS L120C [7]
- JEOL 1400 [5]
- TFS TITAN THEMIS [5]
- FEI MORGAGNI [4]
- FEI/PHILIPS CM120T [4]
- JEOL 2100 [4]
- JEOL 2200FSC [4]
- JEOL 3100FFC [4]
- FEI/PHILIPS CM200T [3]
- JEOL 3000SFF [3]
- FEI/PHILIPS CM200FEG/ST [2]
- FEI TECNAI SPHERA [1]
- FEI/PHILIPS CM12 [1]
- FEI/PHILIPS CM300FEG/HE [1]
- HITACHI H-9500SD [1]
- JEOL 1200EX [1]
- JEOL 1200EXII [1]
- JEOL 4000 [1]
- JEOL KYOTO-3000SFF [1]
- SHUIMU TOTEM 300S [1]
- TFS TUNDRA [1]
Electron Source
- FIELD EMISSION GUN [19495]
- LAB6 [185]
- OTHER [81]
- TUNGSTEN HAIRPIN [19]
Film or detector model
- GATAN K3 6K X 4K [5521]
- GATAN K3 BIOQUANTUM 6K X 4K [4743]
- GATAN K2 SUMMIT 4K X 4K [3749]
- FEI FALCON IV 4K X 4K [2110]
- FEI FALCON III 4K X 4K [1364]
- GATAN K2 QUANTUM 4K X 4K [601]
- TFS FALCON 4I 4K X 4K [450]
- FEI FALCON II 4K X 4K [341]
- GATAN K3 BIOCONTINUUM 6K X 4K [174]
- GATAN ULTRASCAN 4000 4K X 4K [118]
- KODAK SO-163 FILM [92]
- OTHER [85]
- FEI CETA 4K X 4K [72]
- FEI EAGLE 4K X 4K [63]
- TVIPS TEMCAM-F416 4K X 4K [59]
- GATAN K2 BASE 4K X 4K [52]
- GATAN K2 4K X 4K [35]
- DIRECT ELECTRON DE-20 5K X 3K [25]
- FEI EAGLE 2K X 2K [25]
- DIRECT ELECTRON DE-64 8K X 8K [16]
- DIRECT ELECTRON APOLLO 4K X 4K [13]
- GATAN ULTRASCAN 1000 2K X 2K [12]
- GENERIC GATAN 4K X 4K [11]
- TVIPS TEMCAM-F415 4K X 4K [11]
- DECTRIS SINGLA 1K X 1K [10]
- FEI FALCON I 4K X 4K [10]
- DIRECT ELECTRON DE-10 5K X 4K [9]
- GATAN K2 IS 4K X 4K [8]
- GENERIC CCD [5]
- TVIPS TEMCAM-F816 8K X 8K [5]
- DIRECT ELECTRON DE-16 4K X 4K [4]
- TVIPS TEMCAM-F224 2K X 2K [4]
- DIRECT ELECTRON DE-12 4K X 3K [3]
- GATAN ALPINE 2.3K X 3.2K [3]
- KODAK 4489 FILM [3]
- GATAN ULTRASCAN 10000 10K X 10K [2]
- GENERIC TVIPS [2]
- GENERIC TVIPS 2K X 2K [2]
- GENERIC TVIPS 4K X 4K [2]
- GATAN MULTISCAN [1]
- GATAN ORIUS SC1000 4K X 2.7K [1]
- GATAN ORIUS SC200 2K X 2K [1]
- GENERIC FILM [1]
- GENERIC GATAN 2K X 2K [1]
EMPIAR Experiment type
- EMDB [450]
- FIB-SEM [23]
- CLEM [8]
- SBF-SEM [6]
- EXCEPTION [3]
- SSET [2]
EMPIAR Image category
- MICROGRAPHS - MULTIFRAME [396]
- MICROGRAPHS - SINGLE FRAME [125]
- PICKED PARTICLES - SINGLE FRAME - PROCESSED [27]
- TILT SERIES [24]
- RECONSTRUCTED VOLUMES [17]
- PICKED PARTICLES - MULTIFRAME - PROCESSED [10]
- PICKED PARTICLES - SINGLE FRAME - UNPROCESSED [6]
- PICKED PARTICLES - MULTIFRAME - UNPROCESSED [5]
- SUBTOMOGRAMS [2]
- MODEL [1]
- STITCHED MAPS [1]
External links
- UniProt [15094]
- PDB [14682]
- PDBe-Kb [14000]
- AlphaFold DB [12805]
- InterPro [12115]
- Gene Ontology [11413]
- Pfam [10867]
- ChEBI [9231]
- ChEMBL [8411]
- DrugBank [7554]
- Complex Portal [4543]
- EMPIAR [2241]
- EMDB [449]
- SCOP2 [301]
- CATH [169]
- BioImage Archive [8]