Electron Microscopy Data Bank

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DM4

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Jinek M [11]
Querques I [10]
Muckenfuss LM [8]
Loeff L [7]
Pacesa M [7]
Sawicka M [7]
Collinson L [5]
Domart MC [5]
Lucy M Collinson Lmc [4]
Marie-Charlotte Domart Mcd [4]
Peddie CJ [4]
Chanez C [3]
Chen J [3]
Collinson LM [3]
Oberli S [3]
Schmitz M [3]
Beckett AJ [2]
Brohawn SG [2]
Cisneros- Soberanis F [2]
Earnshaw WC [2]
Gerle C [2]
Jones ML [2]
Kern DM [2]
Mahamid J [2]
Peddie CP [2]
Prior IA [2]
Pucekova N [2]
Abad MA [1]
Abraham S [1]
Abramov AY [1]
Adaixo R [1]
Angelova PR [1]
Antao NVA [1]
Anton L [1]
Arthur CP [1]
Athauda D [1]
Banerjee S [1]
Bartesaghi A [1]
Belevich I [1]
Berezhnov AV [1]
Bhabha GB [1]
Booth DG [1]
Bustillo K [1]
Campbell MGC [1]
Chappard A [1]
Choi ML [1]
Ciferri C [1]
Clarke DJ [1]
Cramer P [1]
Davies KM [1]
Davydov AD [1]
De S [1]
Dekker J [1]
Dienemann C [1]
Eek P [1]
Ekiert DCE [1]
El-mohsnawy E [1]
Esteras N [1]
Estevez A [1]
Evans JR [1]
Fedotova E [1]
Frank A [1]
Franke Y [1]
Fujiyoshi Y [1]
Gallagher-jones M [1]
Gandhi S [1]
Gibcus JHG [1]
Gissen P [1]
Goloborodko A [1]
Grigorieff N [1]
Hackos DH [1]
Horrocks MH [1]
Iwasa JI [1]
Jakob RP [1]
Jeacock K [1]
Jeyaprakash AA [1]
Jiko C [1]
Johnson ZL [1]
Jokitalo E [1]
Kato T [1]
Kawamoto A [1]
Klenerman D [1]
Koth CM [1]
Kuehlbrandt W [1]
Kugel C [1]
Kunath T [1]
Kurisu G [1]
Lam CKL [1]
Laughlin TG [1]
Leapman RD [1]
Li T [1]
Liang FL [1]
Lippincott-schwartz J [1]
Little D [1]
Maclachlan C [1]
Maeda S [1]
Mahi MA [1]
Maier T [1]
Matthies D [1]
Medina-pritchard B [1]

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EMPIAR Experiment type

EMPIAR Image category

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EMPIAR-12553

Release date: Dec. 1, 2025
Dataset size: 3.1 TB
Experiment type: EMDB

Nguyen AN, Heim JBH, Cordara GC, Chan MCC, Johannesen HJ, Charlesworth CC, Li ML, Azumaya CMA, Madden BM, Krengel UK, Campbell MGC, Meves AM

bioRxiv () [ DOI: 10.1101/2025.01.08.631572 ]

Image sets:

Polished particle of integrin a5b1 in complex with MINT1526a antibody fab fragment
Motion corrected frames of integrin a5b1 in complex with MINT1526a antibody fab fragment
Unaligned Frames of integrin a5b1 in complex with MINT1526a antibody fab fragment
Movie Gain Refs

[Show more]

EMPIAR-12115

Related EMDB

TniQ-capped TnsC-ATP-dsDNA complex

Release date: Feb. 10, 2025
Dataset size: 2.9 TB
Experiment type: EMDB

Schmitz M, Querques I, Oberli S, Chanez C, Jinek M

Cell (2022) 185 pp. 4999-5010.e17 [ DOI: 10.1016/j.cell.2022.11.009 Pubmed: 36435179 ]

Image sets:

Unaligned multi-frame micrographs of the TniQ-capped Tns-ATP-dsDNA complex
Gain reference 20210602
Gain reference 20210601

EMPIAR-12116

Release date: Feb. 4, 2025
Dataset size: 4.5 TB
Experiment type: EMDB

Schmitz M, Querques I, Oberli S, Chanez C, Jinek M

Cell (2022) 185 pp. 4999-5010.e17 [ DOI: 10.1016/j.cell.2022.11.009 Pubmed: 36435179 ]

Image sets:

Gain reference
Unaligned multi-frame micrographs of the Cas12k-sgRNA-dsDNA-S15-TniQ-TnsC transposon recruitment complex

EMPIAR-12114

Release date: Jan. 28, 2025
Dataset size: 1.3 TB
Experiment type: EMDB

Querques I, Schmitz M, Oberli S, Chanez C, Jinek M

Nature (2021) 599 pp. 497-502 [ DOI: 10.1038/s41586-021-04030-z Pubmed: 34759315 ]

Image sets:

Gain reference
Unaligned multi-frame micrographs of the Scytonema hofmannii TnsC bound to AMPPNP and DNA

EMPIAR-12459

Raw LZW-compressed TIFF files (Structural dynamics of human ribosomes in situ reconstructed by exhaustive high-resolution template matching)

Release date: Dec. 3, 2024
Dataset size: 416.0 GB
Experiment type: Exception

Rickgauer JP, Choi H, Moore AS, Denk W, Lippincott-Schwartz J

Mol. Cell () [ DOI: 10.1016/j.molcel.2024.11.003 ]

Image sets:

Unaligned multi-frame micrographs from human U2OS cells
Unaligned multi-frame micrographs from mouse embryonic fibroblast cells
Gain references images associated with each date-labeled dataset (MMDDYY)

EMPIAR-11919

Rules of engagement for cohesin and condensin complexes during mitotic chromosome formation

Release date: Oct. 25, 2024
Dataset size: 19.0 GB
Experiment type: SBF-SEM

Cisneros-Soberanis F

To Be Published

Image sets:

SMC3 Sections
SMC3CAPH2 Sections
WT - Sections
SMC3CAPH Sections

[Show more]

EMPIAR-12161

SBF SEM images of a notoroid in transverse orientation (Fig S24)

Release date: Sept. 26, 2024
Dataset size: 11.5 GB
Experiment type: SBF-SEM

Tiago Rito TR, Ashley R.G. Libby ARGL, Madeleine Demuth MD, Marie-Charlotte Domart MCD, Jake Cornwall-Scoones JCS, James Briscoe JB

To Be Published

Image sets:

High magnification raw SBF SEM images (ROI02) of notochord in notoroid in transverse orientation
High magnification raw SBF SEM images (ROI01) of notochord in notoroid in transverse orientation
Low magnification raw SBF SEM overview images (ROI00) of notoroid in transverse orientation
Survey image showing the relative position of each of the ROIs above

[Show more]

EMPIAR-12162

SBF SEM images of a notoroid in longitudinal orientation containing TNE-ZsGreen+ notochord cells (Fig S26 part 1)

Release date: Sept. 26, 2024
Dataset size: 170.0 GB
Experiment type: SBF-SEM

Tiago Rito TR, Ashley R.G. Libby ARGL, Madeleine Demuth MD, Marie-Charlotte Domart MCD, Jake Cornwall-Scoones JCS, James Briscoe JB

To Be Published

Image sets:

Low magnification raw SBF SEM overview images (ROI00) of notoroid with TNE-Zs green notochord in longitudinal orientation (Run03)
Low magnification raw SBF SEM overview images (ROI00) of notoroid with TNE-Zs green notochord in longitudinal orientation (Run02)
Low magnification raw SBF SEM overview images (ROI00) of notoroid with TNE-Zs green notochord in longitudinal orientation (Run04)
Low magnification raw SBF SEM overview images (ROI02) of notoroid with TNE-Zs green notochord in longitudinal orientation (Run04)
High magnification raw SBF SEM overview images (ROI01) of notoroid with TNE-Zs green notochord in longitudinal orientation (Run02)
High magnification raw SBF SEM overview images (ROI02) of notoroid with TNE-Zs green notochord in longitudinal orientation (Run06)
Low magnification raw SBF SEM overview images (ROI00) of notoroid with TNE-Zs green notochord in longitudinal orientation (Run06)
Survey images
High magnification raw SBF SEM overview images (ROI01) of notoroid with TNE-Zs green notochord in longitudinal orientation (Run03)
High magnification raw SBF SEM overview images (ROI01) of notoroid with TNE-Zs green notochord in longitudinal orientation (Run04)
High magnification raw SBF SEM overview images (ROI01) of notoroid with TNE-Zs green notochord in longitudinal orientation (Run06)

[Show more]

EMPIAR-12163

SBF SEM images of a notoroid in longitudinal orientation containing TNE-ZsGreen+ notochord cells (Fig S26 part 2)

Release date: Sept. 26, 2024
Dataset size: 232.5 GB
Experiment type: SBF-SEM

Tiago Rito TR, Ashley R.G. Libby ARGL, Madeleine Demuth MD, Marie-Charlotte Domart MCD, Jake Cornwall-Scoones JCS, James Briscoe JB

To Be Published

Image sets:

Low magnification raw SBF SEM overview images (ROI03) of notoroid with TNE-Zs green notochord in longitudinal orientation (Run13)
High magnification raw SBF SEM overview images (ROI05) of notoroid with TNE-Zs green notochord in longitudinal orientation (Run12)
High magnification raw SBF SEM overview images (ROI02) of notoroid with TNE-Zs green notochord in longitudinal orientation (Run13)
Low magnification raw SBF SEM overview images (ROI02) of notoroid with TNE-Zs green notochord in longitudinal orientation (Run12)
Survey images
Low magnification raw SBF SEM overview images (ROI00) of notoroid with TNE-Zs green notochord in longitudinal orientation (Run13)
High magnification raw SBF SEM overview images (ROI03) of notoroid with TNE-Zs green notochord in longitudinal orientation (Run12)
Low magnification raw SBF SEM overview images (ROI04) of notoroid with TNE-Zs green notochord in longitudinal orientation (Run12)

[Show more]

EMPIAR-12164

SBF SEM images of a notoroid in longitudinal orientation containing TNE-ZsGreen+ notochord cells (Fig S26 part 3)

Release date: Sept. 26, 2024
Dataset size: 39.2 GB
Experiment type: SBF-SEM

Tiago Rito TR, Ashley R.G. Libby ARGL, Madeleine Demuth MD, Marie-Charlotte Domart MCD, Jake Cornwall-Scoones JCS, James Briscoe JB

To Be Published

Image sets:

High magnification raw SBF SEM overview images (ROI01) of notoroid with TNE-Zs green notochord in longitudinal orientation (Run17)
High magnification raw SBF SEM overview images (ROI02) of notoroid with TNE-Zs green notochord in longitudinal orientation (Run17)
Survey image
Low magnification raw SBF SEM overview images (ROI00) of notoroid with TNE-Zs green notochord in longitudinal orientation (Run17)

[Show more]

Sort by: Download

Showing 1 - 10 of 44. Page 1 of 5

Display:

Statistics

Download

Select database:

EMPIAR [44]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Download

Filter By

Current Database

Current status

Release Date

Author by name

Jinek M [11]
Querques I [10]
Muckenfuss LM [8]
Loeff L [7]
Pacesa M [7]
Sawicka M [7]
Collinson L [5]
Domart MC [5]
Lucy M Collinson Lmc [4]
Marie-Charlotte Domart Mcd [4]
Peddie CJ [4]
Chanez C [3]
Chen J [3]
Collinson LM [3]
Oberli S [3]
Schmitz M [3]
Beckett AJ [2]
Brohawn SG [2]
Cisneros- Soberanis F [2]
Earnshaw WC [2]
Gerle C [2]
Jones ML [2]
Kern DM [2]
Mahamid J [2]
Peddie CP [2]
Prior IA [2]
Pucekova N [2]
Abad MA [1]
Abraham S [1]
Abramov AY [1]
Adaixo R [1]
Angelova PR [1]
Antao NVA [1]
Anton L [1]
Arthur CP [1]
Athauda D [1]
Banerjee S [1]
Bartesaghi A [1]
Belevich I [1]
Berezhnov AV [1]
Bhabha GB [1]
Booth DG [1]
Bustillo K [1]
Campbell MGC [1]
Chappard A [1]
Choi ML [1]
Ciferri C [1]
Clarke DJ [1]
Cramer P [1]
Davies KM [1]
Davydov AD [1]
De S [1]
Dekker J [1]
Dienemann C [1]
Eek P [1]
Ekiert DCE [1]
El-mohsnawy E [1]
Esteras N [1]
Estevez A [1]
Evans JR [1]
Fedotova E [1]
Frank A [1]
Franke Y [1]
Fujiyoshi Y [1]
Gallagher-jones M [1]
Gandhi S [1]
Gibcus JHG [1]
Gissen P [1]
Goloborodko A [1]
Grigorieff N [1]
Hackos DH [1]
Horrocks MH [1]
Iwasa JI [1]
Jakob RP [1]
Jeacock K [1]
Jeyaprakash AA [1]
Jiko C [1]
Johnson ZL [1]
Jokitalo E [1]
Kato T [1]
Kawamoto A [1]
Klenerman D [1]
Koth CM [1]
Kuehlbrandt W [1]
Kugel C [1]
Kunath T [1]
Kurisu G [1]
Lam CKL [1]
Laughlin TG [1]
Leapman RD [1]
Li T [1]
Liang FL [1]
Lippincott-schwartz J [1]
Little D [1]
Maclachlan C [1]
Maeda S [1]
Mahi MA [1]
Maier T [1]
Matthies D [1]
Medina-pritchard B [1]

Journal

EMPIAR Experiment type

EMPIAR Image category

External links