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EBI Databases Structure Databases PDBsum

Ligand clusters for UniProt code P06276

Ligand clusters for P06276: Cholinesterase OS=Homo sapiens GN=BCHE PE=1 SV=1

Top 6 (of 41) ligand clusters
Cluster 1.
61 ligand types
76 ligands
 Cluster 2.
8 ligand types
60 ligands
 Cluster 3.
14 ligand types
116 ligands
 Cluster 4.
9 ligand types
77 ligands
 Cluster 5.
8 ligand types
60 ligands
 Cluster 6.
6 ligand types
61 ligands
Representative protein: 6i2tB  
JSmol
 

Structures

PDB   Schematic diagram
6i2tB    
5dywA    
5dytA    
5k5eA    
6ruaA    
 more ...

 

 Cluster 1 contains 61 ligand types (of which only 20 are listed. Click for all)

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Ligand Description


 
1. Ligand: GOL × 7
glycerin
Glycerol
PDB codes: 1p0i(A), 1p0q(A), 1xlu(A), 1xlv(A), 2j4c(A), 6eyf(A), 6ez2(A).


 
2. Ligand: DMS × 6
dimethyl sulfoxide
Dimethyl sulfoxide
PDB codes: 6qaa(A), 6qab(A), 6qac(A), 6qad(A), 6r6w(A), 6sam(A).


 
3. Ligand: BEZ × 1
benzoic acid
Benzoic acid
PDB code: 3o9m(A).


 
4. Ligand: BUW × 1
profenamine
R-Ethopropazine
PDB code: 6eqp(A).


 
5. Ligand: CCA × 1
cocaine
2-Benzoyloxy-8-Methyl-8-Aza-Bicyclo[3.2.1]octane-3- Carboxylic acid methyl ester
PDB code: 1ehq(A).


 
6. Ligand: CHT × 1
choline
Choline ion
PDB code: 1p0m(A).


 
7. Ligand: DME × 1
decamethonium
Decamethonium ion
PDB code: 6ep4(A).


 
8. Ligand: THA × 1
tacrine
Tacrine
PDB code: 4bds(A).


 
9. Ligand: BCH × 1
2-(Butyrylsulfanyl)-N,N,N-Trimethylethanaminium
PDB code: 1p0p(A).


 
10. Ligand: BUA × 2
Butanoic acid
PDB codes: 1p0i(A), 2j4c(A).


 
11. Ligand: EFS × 1
Ethyl dihydrogen phosphate
PDB code: 1xlv(A).


 
12. Ligand: DEP × 1
Diethyl phosphonate
PDB code: 1xlw(A).


 
13. Ligand: VXA × 2
Methylphosphonic acid ester group
PDB codes: 1p0p(A), 1p0q(A).


 
14. Ligand: DEP × 1
Diethyl phosphonate
PDB code: 2xmd(A).


 
15. Ligand: EFS × 1
Ethyl dihydrogen phosphate
PDB code: 2wsl(A).


 
16. Ligand: PGE × 2
Triethylene glycol
PDB codes: 6emi(A),


 
17. Ligand: TFX × 2
2-[4-(Dimethylamino)phenyl]-3,6-Dimethyl-1,3- Benzothiazol-3-Ium
PDB codes: 6esy(A),


 
18. Ligand: 15F × 1
1-Benzyl-4-({[(1e)-2,2,2- Trichloroethanimidoyl]oxy}methyl)pyridinium
PDB code: 4b0o(A).


 
19. Ligand: 3F9 × 1
N-{[(3r)-1-(2,3-Dihydro-1h-Inden-2-Yl)piperidin-3- Yl]methyl}-N-(2-Methoxyethyl)naphthalene-2-
Carboxamide
PDB code: 4tpk(A).


 
20. Ligand: 40V × 1
N-{[(3r)-1-(2,3-Dihydro-1h-Inden-2-Yl)piperidin-3- Yl]methyl}-8-Hydroxy-N-(2-Methoxyethyl)-5-
Nitroquinoline-7-Carboxamide
PDB code: 4xii(A).

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 Cluster 2 contains 8 ligand types

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: NAG × 34
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes: 1p0i(A), 1p0m(A), 1p0p(A), 1p0q(A), 1xlu(A), 1xlv(A), 1xlw(A), 2j4c(A), 2pm8(A), 2wid(A), 2wif(A), 2wig(A), 2wij(A), 2wik(A), 2wil(A), 2wsl(A), 2xmb(A), 2xmc(A), 2xmd(A), 2xqi(A), 2y1k(A), 3djy(A), 3dkk(A), 4axb(A), 4b0o(A), 4b0p(A), 4bds(A), 5k5e(A), 5nn0(A), 6ep4(A), 6eqp(A), 6eqq(A), 6eyf(A), 6ez2(A).


 
2. Ligand: NAG-FUC × 15
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, FUC=Alpha-L-Fucopyranose.
PDB codes: 5dyy(A), 6i0b(A), 6i0c(A), 6qaa(A), 6qab(A), 6qac(A), 6qad(A), 6qae(A), 6r6v(A), 6r6w(A), 6rua(A), 6t9p(A), 6t9s(A), 6xta(A), 7amz(A).


 
3. Ligand: NAG-NAG-FUC × 4
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, FUC=Alpha-L-Fucopyranose.
PDB codes: 5dyt(A), 5dyw(A), 6esy(A), 6sam(A).


 
4. Ligand: NAG-FUL × 3
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, FUL=Beta-L-Fucopyranose.
PDB codes: 4bbz(A), 4tpk(A), 6f7q(A).


 
5. Ligand: NAG-NAG × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB code: 5lkr(A).


 
6. Ligand: NAG-NAG-FUL × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, FUL=Beta-L-Fucopyranose.
PDB code: 4xii(A).


 
7. Ligand: NAG-NAG-MAN-MAN-FUC × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, MAN=Alpha-D-Mannopyranose, FUC=Alpha-L-Fucopyranose.
PDB code: 7bgc(A).


 
8. Ligand: PGE × 1
Triethylene glycol
PDB code: 6emi(A).

 

 Cluster 3 contains 14 ligand types

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: NAG × 33
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes: 1p0i(A), 1p0m(A), 1p0p(A), 1p0q(A), 1xlu(A), 1xlv(A), 2j4c(A), 2pm8(A), 2wil(A), 2xqi(A), 2y1k(A), 4axb(A), 4b0o(A), 4b0p(A), 4bbz(A), 4bds(A), 6ep4(A), 6eqq(A), 6eyf(A), 6ez2(A), 6f7q(A), 6i0b(A), 6i0c(A), 6qaa(A), 6qab(A), 6qac(A), 6qad(A), 6qae(A), 6r6v(A), 6r6w(A), 6t9p(A), 6t9s(A), 7bgc(A).


 
2. Ligand: GOL × 3
glycerin
Glycerol
PDB codes: 5dyw(A), 6f7q(A), 6r6w(A).


 
3. Ligand: DMS × 1
dimethyl sulfoxide
Dimethyl sulfoxide
PDB code: 6qaa(A).


 
4. Ligand: SO4 × 44
Sulfate ion
PDB codes: 1p0i(A), 1p0m(A), 1p0p(A), 1p0q(A), 1xlu(A), 1xlv(A), 1xlw(A), 2j4c(A), 2pm8(A), 2wid(A), 2wif(A), 2wig(A), 2wij(A), 2wik(A), 2wil(A), 2wsl(A), 2xmb(A), 2xmc(A), 2xmd(A), 2xqi(A), 2y1k(A), 3dkk(A), 4bbz(A), 4bds(A), 5nn0(A), 6ep4(A), 6eqq(A), 6eyf(A), 6f7q(A), 6i0b(A), 6i0c(A), 6qaa(A), 6qab(A), 6qac(A), 6qad(A), 6qae(A), 6r6v(A), 6r6w(A), 6sam(A), 6t9p(A), 6t9s(A), 6xta(A), 7amz(A), 7bgc(A).


 
5. Ligand: NAG-NAG × 11
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB codes: 4tpk(A), 4xii(A), 5dyt(A), 5dyw(A), 5dyy(A), 5k5e(A), 5lkr(A), 6esj(A), 6esy(A), 6rua(A), 6xta(A).


 
6. Ligand: NAG-FUL × 8
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, FUL=Beta-L-Fucopyranose.
PDB codes: 2wid(A), 2wif(A), 2wig(A), 2wij(A), 2wik(A), 2xmb(A), 3djy(A), 3dkk(A).


 
7. Ligand: NAG-FUC × 6
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, FUC=Alpha-L-Fucopyranose.
PDB codes: 1xlw(A), 2wsl(A), 2xmc(A), 5nn0(A), 6eqp(A), 6sam(A).


 
8. Ligand: EDO × 3
1,2-Ethanediol
PDB codes: 4xii(A), 5dyw(A), 6rua(A).


 
9. Ligand: FUC × 2
Alpha-L-Fucopyranose
PDB codes: 2y1k(A), 4bds(A).


 
10. Ligand: NAG-NAG-FUC × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, FUC=Alpha-L-Fucopyranose.
PDB code: 7amz(A).


 
11. Ligand: NAG-NAG-FUL × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, FUL=Beta-L-Fucopyranose.
PDB code: 2xmd(A).


 
12. Ligand: PEG × 1
Di(hydroxyethyl)ether
PDB code: 5nn0(A).


 
13. Ligand: PGE × 1
Triethylene glycol
PDB code: 6emi(A).


 
14. Ligand: PO4 × 1
Phosphate ion
PDB code: 3djy(A).

 

 Cluster 4 contains 9 ligand types

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: NAG × 48
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes: 1p0i(A), 1p0m(A), 1p0p(A), 1xlu(A), 1xlv(A), 1xlw(A), 2j4c(A), 2pm8(A), 2wid(A), 2wif(A), 2wig(A), 2wij(A), 2wik(A), 2wil(A), 2wsl(A), 2xmb(A), 2xmc(A), 2xmd(A), 2xqi(A), 2y1k(A), 3djy(A), 3dkk(A), 4axb(A), 4b0o(A), 4b0p(A), 4bbz(A), 4bds(A), 5nn0(A), 6ep4(A), 6eqp(A), 6eqq(A), 6eyf(A), 6f7q(A), 6i0b(A), 6i0c(A), 6qaa(A), 6qab(A), 6qac(A), 6qad(A), 6qae(A), 6r6v(A), 6r6w(A), 6sam(A), 6t9p(A), 6t9s(A), 6xta(A), 7amz(A), 7bgc(A).


 
2. Ligand: SO4 × 18
Sulfate ion
PDB codes: 4bbz(A), 5nn0(A), 6eqp(A), 6i0b(A), 6i0c(A), 6qaa(A), 6qab(A), 6qac(A), 6qad(A), 6qae(A), 6r6v(A), 6r6w(A), 6sam(A), 6t9p(A), 6t9s(A), 7amz(A), 7bgc(A).


 
3. Ligand: NAG-NAG × 3
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB codes: 4tpk(A), 4xii(A), 5lkr(A).


 
4. Ligand: NAG-NAG-FUL × 3
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, FUL=Beta-L-Fucopyranose.
PDB codes: 5dyw(A), 5dyy(A), 6rua(A).


 
5. Ligand: CWQ × 1
2-[[(3~{r})-1-(2,3-Dihydro-1~{h}-Inden-2-Yl)piperidin- 3-Yl]methyl-(8-Oxidanylquinolin-2-
Yl)carbonyl- Amino]ethyl-Dimethyl-Azanium
PDB code: 6f7q(A).


 
6. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 6f7q(A).


 
7. Ligand: FUL × 1
Beta-L-Fucopyranose
PDB code: 4xii(A).


 
8. Ligand: NAG-FUC × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, FUC=Alpha-L-Fucopyranose.
PDB code: 6esy(A).


 
9. Ligand: NAG-NAG-FUC × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, FUC=Alpha-L-Fucopyranose.
PDB code: 5dyt(A).

 

 Cluster 5 contains 8 ligand types

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: NAG × 5
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes: 2y1k(A), 5k5e(A), 6esj(A), 6ez2(A).


 
2. Ligand: NAG-NAG-FUC × 24
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, FUC=Alpha-L-Fucopyranose.
PDB codes: 1p0i(A), 1p0m(A), 1p0p(A), 1p0q(A), 2j4c(A), 2wil(A), 2wsl(A), 2xmc(A), 2xmd(A), 5dyt(A), 5dyw(A), 5nn0(A), 6i0b(A), 6i0c(A), 6qaa(A), 6qab(A), 6qad(A), 6qae(A), 6r6v(A), 6r6w(A), 6rua(A), 6sam(A), 7amz(A), 7bgc(A).


 
3. Ligand: NAG-NAG-FUL × 20
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, FUL=Beta-L-Fucopyranose.
PDB codes: 1xlu(A), 1xlv(A), 1xlw(A), 2wid(A), 2wif(A), 2wig(A), 2wij(A), 2wik(A), 2xmb(A), 2xqi(A), 3djy(A), 3dkk(A), 4axb(A), 4b0o(A), 4b0p(A), 4bbz(A), 4bds(A), 6ep4(A), 6eqp(A), 6f7q(A).


 
4. Ligand: NAG-FUC × 5
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, FUC=Alpha-L-Fucopyranose.
PDB codes: 4tpk(A), 5lkr(A), 6t9p(A), 6t9s(A), 6xta(A).


 
5. Ligand: NAG-FUL × 2
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, FUL=Beta-L-Fucopyranose.
PDB codes: 5dyy(A), 6eqq(A).


 
6. Ligand: NAG-NAG × 2
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB codes: 4xii(A), 6qac(A).


 
7. Ligand: FUC × 1
Alpha-L-Fucopyranose
PDB code: 2y1k(A).


 
8. Ligand: FUL × 1
Beta-L-Fucopyranose
PDB code: 4xii(A).

 

 Cluster 6 contains 6 ligand types

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: NAG × 11
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes: 4xii(A), 5dyt(A), 5dyw(A), 5dyy(A), 5k5e(A), 6esj(A), 6esy(A), 6eyf(A), 6ez2(A), 6i2t(B), 6rua(A).


 
2. Ligand: NAG-NAG-FUC × 23
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, FUC=Alpha-L-Fucopyranose.
PDB codes: 1p0i(A), 1p0m(A), 1p0p(A), 1p0q(A), 1xlw(A), 2j4c(A), 2wil(A), 2xmc(A), 4tpk(A), 5nn0(A), 6i0b(A), 6i0c(A), 6qaa(A), 6qab(A), 6qac(A), 6qad(A), 6qae(A), 6r6v(A), 6r6w(A), 6sam(A), 6t9s(A), 7amz(A), 7bgc(A).


 
3. Ligand: NAG-NAG-FUL × 20
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, FUL=Beta-L-Fucopyranose.
PDB codes: 2wid(A), 2wif(A), 2wig(A), 2wij(A), 2wik(A), 2wsl(A), 2xmb(A), 2xmd(A), 2xqi(A), 3djy(A), 3dkk(A), 4axb(A), 4b0o(A), 4b0p(A), 4bbz(A), 4bds(A), 6ep4(A), 6eqp(A), 6eqq(A), 6f7q(A).


 
4. Ligand: NAG-NAG × 4
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB codes: 1xlu(A), 1xlv(A), 2pm8(A), 5lkr(A).


 
5. Ligand: NAG-NAG-TGY × 2
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, TGY=1-Deoxy-Alpha-D-Tagatopyranose.
PDB codes: 6t9p(A), 6xta(A).


 
6. Ligand: NAG-FUC × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, FUC=Alpha-L-Fucopyranose.
PDB code: 2y1k(A).

 

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