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release_date:"2026-2-18T00:00:00Z" AND database:EMDB

Filter By

Current Database

  • EMDB [373]

Current status

  • REL [373]

Sample type

  • Complex [321]
  • Protein [232]
  • Ligand [146]
  • RNA [51]
  • DNA [38]
  • Cell [20]
  • Cellular component [15]
  • Tissue [13]
  • Virus [4]
  • Other [1]

Organism

  • Homo sapiens [159]
  • Mus musculus [64]
  • Synthetic construct [28]
  • Rattus norvegicus [24]
  • Chlamydomonas reinhardtii [21]
  • Streptococcus thermophilus [19]
  • Saccharomyces cerevisiae [11]
  • Prevotella copri [8]
  • Saccharomyces cerevisiae [7]
  • Staphylococcus aureus [6]
  • Selenomonas sp. [6]
  • Corynebacterium glutamicum [5]
  • Xenopus laevis [5]
  • Bos taurus [5]
  • Influenza a virus [4]
  • Clostridium perfringens [4]
  • Enterobacteria phage t4 [4]
  • Vicugna pacos [4]
  • Azotobacter vinelandii [4]
  • Escherichia coli [4]
  • Heterocephalus glaber [3]
  • Nostoc sp. (strain pcc 7120 / sag 25.82 / utex 2576) [3]
  • Streptococcus sanguinis [3]
  • Escherichia coli [3]
  • Dorea longicatena [3]
  • (no species) [2]
  • Mamastrovirus 1 [2]
  • Lactococcus lactis [2]
  • Escherichia phage lambda [2]
  • (no species) [2]
  • Marchantia polymorpha [2]
  • Arabidopsis thaliana [2]
  • Escherichia coli [2]
  • Escherichia coli [2]
  • (no species) [1]
  • Cavia porcellus [1]
  • Protobothrops mucrosquamatus [1]
  • Rhodospirillum rubrum [1]
  • Roseiflexus castenholzii [1]
  • Oceanobacillus iheyensis [1]
  • Sudan ebolavirus [1]
  • Euglena gracilis [1]
  • Svunavirus gbsv1 [1]
  • Orthoebolavirus sudanense [1]
  • Legionella pneumophila [1]
  • Orthohepadnavirus hominoidei [1]
  • Pyrococcus horikoshii [1]
  • Citrobacter rodentium [1]
  • Escherichia coli [1]
  • Apis mellifera [1]
  • Gallus gallus [1]
  • Lama glama [1]

EM Method

  • Single-particle [329]
  • Helical reconstruction [23]
  • Tomography [11]
  • Subtomogram averaging [10]

Resolution

  • < 2Å [6]
  • ≥ 2Å and < 3Å [97]
  • ≥ 3Å and < 4Å [188]
  • ≥ 4Å and < 5Å [31]
  • ≥ 5Å and < 6Å [9]
  • ≥ 6Å and < 8Å [13]
  • ≥ 8Å and < 12Å [6]
  • ≥ 12Å and < 16Å [1]
  • ≥ 16Å and < 20Å [2]
  • ≥ 20Å and < 30Å [8]

Release Date

  • 2026 [373]

Author by name

  • Ge JP [54]
  • Xu RS [54]
  • Yu J [54]
  • Liu M [25]
  • Xie X [25]
  • Zhou XE [25]
  • Engel BD [21]
  • Kater L [21]
  • Lehner PA [21]
  • Pfeffer S [21]
  • Van Der Stappen P [21]
  • Waltz F [21]
  • Gaizauskaite U [19]
  • Sasnauskas G [19]
  • Tamulaitiene G [19]
  • Wu C [18]
  • Barrientos A [17]
  • Brischigliaro M [17]
  • Jones PA [17]
  • Wang S [17]
  • Worden EJ [17]
  • Xiong Y [17]
  • Zhang Y [17]
  • Zheng W [17]
  • Kim J [16]
  • Gangwar SP [15]
  • Li CL [15]
  • Newton TP [15]
  • Sobolevsky AI [15]
  • Yang W [15]
  • Yelshanskaya MV [15]
  • Yen LY [15]
  • Ang LC [13]
  • Castellani R [13]
  • Das S [13]
  • De Coster W [13]
  • Fukuda Y [13]
  • Ghetti B [13]
  • Herms J [13]
  • Inoue T [13]
  • Joseph JT [13]
  • Lashley T [13]
  • Mackenzie IRA [13]
  • Murzin AG [13]
  • Neumann M [13]
  • Newell K [13]
  • Rademakers R [13]
  • Roeber S [13]
  • Ryskeldi-falcon B [13]
  • Shobu K [13]
  • Synofzik M [13]
  • Takai M [13]
  • Tetter S [13]
  • Van Den Broeck M [13]
  • Varghese NR [13]
  • Sun L [11]
  • Liu Y [10]
  • Zhang W [10]
  • Brenner J [9]
  • Brill J [9]
  • Grass JH [9]
  • Grotjahn DA [9]
  • Hammerschmid D [9]
  • Harper JW [9]
  • Hummer G [9]
  • Kraus F [9]
  • Langer JD [9]
  • Li D [9]
  • Lizarrondo J [9]
  • Medina M [9]
  • Ohlerich S [9]
  • Pflaum J [9]
  • Schuman E [9]
  • Schwarz A [9]
  • Soltow LM [9]
  • Stuke JFM [9]
  • Weber N [9]
  • Welsch S [9]
  • Wilfling F [9]
  • Windbergs M [9]
  • Bayly-jones C [8]
  • Chang YG [8]
  • Dong S [8]
  • Ellisdon AM [8]
  • Formosa LE [8]
  • Frescher NJ [8]
  • Fu L [8]
  • Halls ML [8]
  • Hu Y [8]
  • Jones GD [8]
  • Jones P [8]
  • Keen AC [8]
  • Lam T [8]
  • Lim SS [8]
  • Luo W [8]
  • Lupton CJ [8]
  • Madej MG [8]
  • Mastos C [8]
  • Venugopal H [8]
  • Wang C [8]

Journal

  • TO BE PUBLISHED [221]
  • BIORXIV [52]
  • NAT COMMUN [43]
  • NUCLEIC ACIDS RES [14]
  • PNAS [11]
  • CELL [8]
  • ACTA CRYSTALLOGR D STRUCT BIOL [6]
  • CELL DISCOV [4]
  • RES SQ [3]
  • BIOCHIM BIOPHYS ACTA BIOENERG [2]
  • COMMUN BIOL [2]
  • ELIFE [2]
  • SCI ADV [2]
  • GUT [1]
  • J MED CHEM [1]
  • MOL CELL [1]
  • MOL CELLS [1]
  • NAT STRUCT MOL BIOL [1]
  • NEURON [1]
  • PROTEIN SCI [1]
  • PROTEINS [1]
  • SCIENCE [1]

Software

  • CRYOSPARC [205]
  • RELION [58]
  • GCTF [23]
  • ARETOMO [12]
  • CTFFIND [9]
  • IMOD [8]
  • UCSF CHIMERAX [7]
  • COOT [6]
  • PYTOM [6]
  • CCP4 PACKAGE [3]
  • PHENIX [3]
  • WARP [3]
  • I3 [2]
  • CRYODRGN [1]

Microscope

  • TFS KRIOS [283]
  • TFS GLACIOS [28]
  • JEOL CRYO ARM 200 [20]
  • FEI TALOS ARCTICA [15]
  • FEI TECNAI F30 [8]
  • FEI TECNAI 20 [7]
  • FEI TITAN KRIOS [2]
  • JEOL 2100F [2]
  • JEOL CRYO ARM 300 [2]
  • TFS TALOS [2]
  • TFS TITAN THEMIS [2]
  • FEI MORGAGNI [1]
  • FEI POLARA 300 [1]

Electron Source

  • FIELD EMISSION GUN [372]
  • OTHER [1]

Film or detector model

  • GATAN K3 6K X 4K [199]
  • FEI FALCON IV 4K X 4K [42]
  • TFS FALCON 4I 4K X 4K [40]
  • GATAN K3 BIOQUANTUM 6K X 4K [30]
  • FEI FALCON III 4K X 4K [28]
  • GATAN K3 BIOCONTINUUM 6K X 4K [10]
  • GATAN K2 SUMMIT 4K X 4K [9]
  • GATAN ULTRASCAN 4000 4K X 4K [6]
  • FEI FALCON II 4K X 4K [5]
  • GATAN K2 QUANTUM 4K X 4K [3]
  • OTHER [2]
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Showing 1 - 10 of 373. Page 1 of 38
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EMD-47349
Download Map
3D View
The consensus model of the cryo-EM structure of human DNMT3A2-DNMT3B3 complex bound to di-nucleosome
Release date: Feb. 18, 2026
Resolution: 8.0 Å
EM Method: Single-particle
Fitted PDBs: 9e05

Xie X, Liu M, Zhou XE, Worden EJ, Jones PA

To Be Published

EMD-47353
Download Map
3D View
Cryo-EM structure a single nucleosome 2 focus of human DNMT3A2-DNMT3B3 complex bound to di-nucleosome
Release date: Feb. 18, 2026
Resolution: 3.72 Å
EM Method: Single-particle
Fitted PDBs: 9e09

Xie X, Liu M, Zhou XE, Worden EJ, Jones PA

To Be Published

EMD-47354
Download Map
3D View
A focus of DNMT tetramer 1 of the cryo-EM structure of human DNMT3A2-DNMT3B3 complex bound to di-nucleosome
Release date: Feb. 18, 2026
Resolution: 3.46 Å
EM Method: Single-particle
Fitted PDBs: 9e0f

Xie X, Liu M, Zhou XE, Worden EJ, Jones PA

To Be Published

EMD-47355
Download Map
3D View
A focus of tetramer 2 of the cryo-EM structure of human DNMT3A2-DNMT3B3 complex bound to di-nucleosome
Release date: Feb. 18, 2026
Resolution: 3.72 Å
EM Method: Single-particle
Fitted PDBs: 9e0g

Xie X, Liu M, Zhou XE, Worden EJ, Jones PA

To Be Published

EMD-47367
Download Map
3D View
Cryo-EM structure of a single nucleosome 1 focus of human DNMT3A2-DNMT3B3 complex bound to di-nucleosome
Release date: Feb. 18, 2026
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 9e0r

Xie X, Liu M, Zhou XE, Worden EJ, Jones PA

To Be Published

EMD-47448
Download Map
3D View
Cryo-EM structure of human DNMT3A2-DNMT3B3 complex bound to a di-nucleosome with a five base pair linker
Release date: Feb. 18, 2026
Resolution: 6.08 Å
EM Method: Single-particle
Fitted PDBs: 9e2d

Xie X, Liu M, Zhou XE, Worden E, Jones P

To Be Published

EMD-47450
Download Map
3D View
Cryo-EM structure of a di-nucleosome with a five base pair linker
Release date: Feb. 18, 2026
Resolution: 5.9 Å
EM Method: Single-particle
Fitted PDBs: 9e2f

Xie X, Liu M, Zhou XE, Worden E, Jones P

To Be Published

EMD-47461
Download Map
3D View
Cryo-EM structure of DNMT 3A2/3B3 tetramer in complex with a di-nucleosome with a six base pair linker
Release date: Feb. 18, 2026
Resolution: 3.14 Å
EM Method: Single-particle
Fitted PDBs: 9e2q

Xie X, Liu M, Zhou XE, Worden E, Jones P

To Be Published

EMD-47462
Download Map
3D View
Cryo-EM structure of human DNMT3A2-DNMT3B3 complex bound to a di-nucleosome and an histone-3 peptide
Release date: Feb. 18, 2026
Resolution: 7.71 Å
EM Method: Single-particle
Fitted PDBs: 9e2r

Xie X, Liu M, Zhou XE, Worden E, Jones P

To Be Published

EMD-47479
Download Map
3D View
Cryo-EM structure of DNMT 3A2/3B3 tetramer in complex with a di-nucleosome with K120R mutant H2B
Release date: Feb. 18, 2026
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 9e3d

Xie X, Liu M, Zhou XE, Worden E, Jones P

To Be Published

Sort by: Download
Showing 1 - 10 of 373. Page 1 of 38
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [373]

Current status

  • REL [373]

Sample type

  • Complex [321]
  • Protein [232]
  • Ligand [146]
  • RNA [51]
  • DNA [38]
  • Cell [20]
  • Cellular component [15]
  • Tissue [13]
  • Virus [4]
  • Other [1]

Organism

  • Homo sapiens [159]
  • Mus musculus [64]
  • Synthetic construct [28]
  • Rattus norvegicus [24]
  • Chlamydomonas reinhardtii [21]
  • Streptococcus thermophilus [19]
  • Saccharomyces cerevisiae [11]
  • Prevotella copri [8]
  • Saccharomyces cerevisiae [7]
  • Staphylococcus aureus [6]
  • Selenomonas sp. [6]
  • Corynebacterium glutamicum [5]
  • Xenopus laevis [5]
  • Bos taurus [5]
  • Influenza a virus [4]
  • Clostridium perfringens [4]
  • Enterobacteria phage t4 [4]
  • Vicugna pacos [4]
  • Azotobacter vinelandii [4]
  • Escherichia coli [4]
  • Heterocephalus glaber [3]
  • Nostoc sp. (strain pcc 7120 / sag 25.82 / utex 2576) [3]
  • Streptococcus sanguinis [3]
  • Escherichia coli [3]
  • Dorea longicatena [3]
  • (no species) [2]
  • Mamastrovirus 1 [2]
  • Lactococcus lactis [2]
  • Escherichia phage lambda [2]
  • (no species) [2]
  • Marchantia polymorpha [2]
  • Arabidopsis thaliana [2]
  • Escherichia coli [2]
  • Escherichia coli [2]
  • (no species) [1]
  • Cavia porcellus [1]
  • Protobothrops mucrosquamatus [1]
  • Rhodospirillum rubrum [1]
  • Roseiflexus castenholzii [1]
  • Oceanobacillus iheyensis [1]
  • Sudan ebolavirus [1]
  • Euglena gracilis [1]
  • Svunavirus gbsv1 [1]
  • Orthoebolavirus sudanense [1]
  • Legionella pneumophila [1]
  • Orthohepadnavirus hominoidei [1]
  • Pyrococcus horikoshii [1]
  • Citrobacter rodentium [1]
  • Escherichia coli [1]
  • Apis mellifera [1]
  • Gallus gallus [1]
  • Lama glama [1]

EM Method

  • Single-particle [329]
  • Helical reconstruction [23]
  • Tomography [11]
  • Subtomogram averaging [10]

Resolution

  • < 2Å [6]
  • ≥ 2Å and < 3Å [97]
  • ≥ 3Å and < 4Å [188]
  • ≥ 4Å and < 5Å [31]
  • ≥ 5Å and < 6Å [9]
  • ≥ 6Å and < 8Å [13]
  • ≥ 8Å and < 12Å [6]
  • ≥ 12Å and < 16Å [1]
  • ≥ 16Å and < 20Å [2]
  • ≥ 20Å and < 30Å [8]

Release Date

  • 2026 [373]

Author by name

  • Ge JP [54]
  • Xu RS [54]
  • Yu J [54]
  • Liu M [25]
  • Xie X [25]
  • Zhou XE [25]
  • Engel BD [21]
  • Kater L [21]
  • Lehner PA [21]
  • Pfeffer S [21]
  • Van Der Stappen P [21]
  • Waltz F [21]
  • Gaizauskaite U [19]
  • Sasnauskas G [19]
  • Tamulaitiene G [19]
  • Wu C [18]
  • Barrientos A [17]
  • Brischigliaro M [17]
  • Jones PA [17]
  • Wang S [17]
  • Worden EJ [17]
  • Xiong Y [17]
  • Zhang Y [17]
  • Zheng W [17]
  • Kim J [16]
  • Gangwar SP [15]
  • Li CL [15]
  • Newton TP [15]
  • Sobolevsky AI [15]
  • Yang W [15]
  • Yelshanskaya MV [15]
  • Yen LY [15]
  • Ang LC [13]
  • Castellani R [13]
  • Das S [13]
  • De Coster W [13]
  • Fukuda Y [13]
  • Ghetti B [13]
  • Herms J [13]
  • Inoue T [13]
  • Joseph JT [13]
  • Lashley T [13]
  • Mackenzie IRA [13]
  • Murzin AG [13]
  • Neumann M [13]
  • Newell K [13]
  • Rademakers R [13]
  • Roeber S [13]
  • Ryskeldi-falcon B [13]
  • Shobu K [13]
  • Synofzik M [13]
  • Takai M [13]
  • Tetter S [13]
  • Van Den Broeck M [13]
  • Varghese NR [13]
  • Sun L [11]
  • Liu Y [10]
  • Zhang W [10]
  • Brenner J [9]
  • Brill J [9]
  • Grass JH [9]
  • Grotjahn DA [9]
  • Hammerschmid D [9]
  • Harper JW [9]
  • Hummer G [9]
  • Kraus F [9]
  • Langer JD [9]
  • Li D [9]
  • Lizarrondo J [9]
  • Medina M [9]
  • Ohlerich S [9]
  • Pflaum J [9]
  • Schuman E [9]
  • Schwarz A [9]
  • Soltow LM [9]
  • Stuke JFM [9]
  • Weber N [9]
  • Welsch S [9]
  • Wilfling F [9]
  • Windbergs M [9]
  • Bayly-jones C [8]
  • Chang YG [8]
  • Dong S [8]
  • Ellisdon AM [8]
  • Formosa LE [8]
  • Frescher NJ [8]
  • Fu L [8]
  • Halls ML [8]
  • Hu Y [8]
  • Jones GD [8]
  • Jones P [8]
  • Keen AC [8]
  • Lam T [8]
  • Lim SS [8]
  • Luo W [8]
  • Lupton CJ [8]
  • Madej MG [8]
  • Mastos C [8]
  • Venugopal H [8]
  • Wang C [8]

Journal

  • TO BE PUBLISHED [221]
  • BIORXIV [52]
  • NAT COMMUN [43]
  • NUCLEIC ACIDS RES [14]
  • PNAS [11]
  • CELL [8]
  • ACTA CRYSTALLOGR D STRUCT BIOL [6]
  • CELL DISCOV [4]
  • RES SQ [3]
  • BIOCHIM BIOPHYS ACTA BIOENERG [2]
  • COMMUN BIOL [2]
  • ELIFE [2]
  • SCI ADV [2]
  • GUT [1]
  • J MED CHEM [1]
  • MOL CELL [1]
  • MOL CELLS [1]
  • NAT STRUCT MOL BIOL [1]
  • NEURON [1]
  • PROTEIN SCI [1]
  • PROTEINS [1]
  • SCIENCE [1]

Software

  • CRYOSPARC [205]
  • RELION [58]
  • GCTF [23]
  • ARETOMO [12]
  • CTFFIND [9]
  • IMOD [8]
  • UCSF CHIMERAX [7]
  • COOT [6]
  • PYTOM [6]
  • CCP4 PACKAGE [3]
  • PHENIX [3]
  • WARP [3]
  • I3 [2]
  • CRYODRGN [1]

Microscope

  • TFS KRIOS [283]
  • TFS GLACIOS [28]
  • JEOL CRYO ARM 200 [20]
  • FEI TALOS ARCTICA [15]
  • FEI TECNAI F30 [8]
  • FEI TECNAI 20 [7]
  • FEI TITAN KRIOS [2]
  • JEOL 2100F [2]
  • JEOL CRYO ARM 300 [2]
  • TFS TALOS [2]
  • TFS TITAN THEMIS [2]
  • FEI MORGAGNI [1]
  • FEI POLARA 300 [1]

Electron Source

  • FIELD EMISSION GUN [372]
  • OTHER [1]

Film or detector model

  • GATAN K3 6K X 4K [199]
  • FEI FALCON IV 4K X 4K [42]
  • TFS FALCON 4I 4K X 4K [40]
  • GATAN K3 BIOQUANTUM 6K X 4K [30]
  • FEI FALCON III 4K X 4K [28]
  • GATAN K3 BIOCONTINUUM 6K X 4K [10]
  • GATAN K2 SUMMIT 4K X 4K [9]
  • GATAN ULTRASCAN 4000 4K X 4K [6]
  • FEI FALCON II 4K X 4K [5]
  • GATAN K2 QUANTUM 4K X 4K [3]
  • OTHER [2]