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release_date:"2026-3-4T00:00:00Z" AND database:EMDB

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Current Database

  • EMDB [285]

Current status

  • REL [285]

Sample type

  • Complex [241]
  • Protein [193]
  • Ligand [143]
  • RNA [32]
  • Cell [28]
  • DNA [23]
  • Virus [12]
  • Cellular component [5]

Organism

  • Homo sapiens [121]
  • Synthetic construct [49]
  • Mus musculus [26]
  • Escherichia coli [18]
  • Severe acute respiratory syndrome coronavirus [16]
  • Aequorea victoria [14]
  • Saccharomyces cerevisiae [13]
  • Oryctolagus cuniculus [13]
  • Sus scrofa [12]
  • Lama glama [12]
  • Mycobacterium phage bxb1 [11]
  • Escherichia coli [11]
  • Human herpesvirus 3 [9]
  • Mycolicibacterium smegmatis [9]
  • Roseiflexus castenholzii [8]
  • Escherichia coli [6]
  • Neisseria meningitidis [5]
  • (no species) [4]
  • Arabidopsis thaliana [4]
  • Neisseria meningitidis [4]
  • Phytophthora sojae [4]
  • Human immunodeficiency virus 1 [3]
  • Enterovirus c [3]
  • Synthetic rna [3]
  • Actinomyces procaprae [3]
  • Vicugna pacos [2]
  • Azotobacter vinelandii [2]
  • Saccharomyces cerevisiae [2]
  • Tetrahymena thermophila [2]
  • Crimean-congo hemorrhagic fever orthonairovirus [2]
  • Artemia franciscana [2]
  • (no species) [2]
  • Xenopus laevis [2]
  • Macaca mulatta [2]
  • Vaccinia virus [1]
  • Vaccinia virus [1]
  • Alphapapillomavirus 7 [1]
  • Dengue virus [1]
  • Bacillus thuringiensis [1]
  • Mycolicibacterium phlei [1]
  • Mycobacterium tuberculosis [1]
  • Human adenovirus sp. [1]
  • Spirochaetota bacterium [1]
  • Streptomyces phage phic31 [1]
  • Escherichia phage lambda [1]
  • (no species) [1]
  • Dna molecule [1]
  • Tenuivirus oryzabrevis [1]
  • Bryopsis corticulans [1]
  • Azotobacter vinelandii [1]
  • Oryza sativa [1]
  • Rotavirus a [1]
  • Acinetobacter baumannii [1]
  • Neisseria gonorrhoeae [1]
  • Citrobacter freundii [1]
  • Zymomonas mobilis [1]
  • Caenorhabditis elegans [1]
  • Drosophila melanogaster [1]
  • Mycobacterium tuberculosis [1]
  • Salmonella enterica [1]

EM Method

  • Single-particle [241]
  • Subtomogram averaging [22]
  • Tomography [18]
  • Helical reconstruction [4]

Resolution

  • < 2Å [3]
  • ≥ 2Å and < 3Å [78]
  • ≥ 3Å and < 4Å [126]
  • ≥ 4Å and < 5Å [27]
  • ≥ 5Å and < 6Å [1]
  • ≥ 6Å and < 8Å [8]
  • ≥ 8Å and < 12Å [9]
  • ≥ 12Å and < 16Å [4]
  • ≥ 16Å and < 20Å [3]
  • ≥ 20Å and < 30Å [6]
  • ≥ 30Å [2]

Release Date

  • 2026 [285]

Author by name

  • Majumdar S [20]
  • Zhao Y [17]
  • Ferre-D Amare Ar [16]
  • Jones CP [16]
  • Papasergi-scott MM [15]
  • Peroto MC [15]
  • Robertson MJ [15]
  • Skiniotis G [15]
  • Dlamini LS [14]
  • Endicott J [14]
  • Fairhead M [14]
  • Ferreira DSM [14]
  • Gittins O [14]
  • Martin M [14]
  • Noble M [14]
  • Pike ACW [14]
  • Rowland RJ [14]
  • Sauer DB [14]
  • Von Delft F [14]
  • Heinz DW [13]
  • Yamashita K [13]
  • Yuan B [13]
  • Boczkowska M [12]
  • Dominguez R [12]
  • Li R [12]
  • Li X [12]
  • Palmer NJ [12]
  • Rebowski G [12]
  • Wei Y [12]
  • Hiraizumi M [11]
  • Nishimasu H [11]
  • Baumeister W [10]
  • Beck F [10]
  • Enenkel C [10]
  • Ernst OP [10]
  • Qu L [10]
  • Schulman BA [10]
  • Soma T [10]
  • Tang X [10]
  • Tang XM [10]
  • Wilfling F [10]
  • Olver SL [9]
  • Zhang Y [9]
  • Blanchard SC [8]
  • Chiu W [8]
  • Gaisin AV [8]
  • Gaisin VA [8]
  • Guo J [8]
  • Hadjicharalambous C [8]
  • Hu M [8]
  • Kalathur R [8]
  • Koblizek M [8]
  • Li J [8]
  • Modak A [8]
  • Mujakic I [8]
  • Pilhofer M [8]
  • Varga BR [8]
  • Villena-alemany C [8]
  • Woldeyes RA [8]
  • Noinaj N [7]
  • Varga B [7]
  • Yuan Q [7]
  • Zhao L [7]
  • Andersen ES [6]
  • Cheng S [6]
  • Civit L [6]
  • Desdorf L [6]
  • Dominguze R [6]
  • Drabbels M [6]
  • Dubey S [6]
  • Geary C [6]
  • Gluck N [6]
  • Jana S [6]
  • Kjems J [6]
  • Kristoffersen EL [6]
  • Li Y [6]
  • Liu Y [6]
  • Lorenz UJ [6]
  • Stange A [6]
  • Valero J [6]
  • Vallina NS [6]
  • Zhou Y [6]
  • Zwergius NH [6]
  • Appourchaux K [5]
  • Bernhard SM [5]
  • Chanda B [5]
  • Che T [5]
  • Ciferri C [5]
  • Denn E [5]
  • Fay JF [5]
  • Gao HS [5]
  • Inoue A [5]
  • Koo CW [5]
  • Liu SX [5]
  • Liu YS [5]
  • Murata T [5]
  • Ramos-gonzalez N [5]
  • Reinl EL [5]
  • Roy Chowdhury S [5]
  • Shen EZ [5]

Journal

  • TO BE PUBLISHED [236]
  • CELL [11]
  • NATURE [9]
  • ISME J [8]
  • BIORXIV [7]
  • NAT COMMUN [6]
  • ACTA CRYSTALLOGR D STRUCT BIOL [3]
  • J MED CHEM [2]
  • NUCLEIC ACIDS RES [2]
  • CELL REP [1]
  • EMBO J [1]
  • J MOL CELL BIOL [1]
  • MBIO [1]
  • PROTEIN SCI [1]
  • SCIENCE [1]

Software

  • CRYOSPARC [145]
  • RELION [23]
  • WARP [11]
  • IMOD [10]
  • COOT [2]
  • GCTF [2]
  • AV3 [1]
  • CRYOSMART [1]
  • DYNAMO [1]
  • EMCLARITY [1]
  • PHENIX [1]

Microscope

  • TFS KRIOS [217]
  • TFS GLACIOS [18]
  • FEI TITAN KRIOS [14]
  • FEI TALOS ARCTICA [11]
  • TFS TITAN THEMIS [7]
  • FEI TECNAI F30 [5]
  • FEI TITAN [4]
  • JEOL CRYO ARM 300 [4]
  • JEOL CRYO ARM 200 [2]
  • FEI MORGAGNI [1]
  • FEI POLARA 300 [1]
  • TFS TALOS [1]

Electron Source

  • FIELD EMISSION GUN [285]

Film or detector model

  • GATAN K3 6K X 4K [89]
  • FEI FALCON IV 4K X 4K [73]
  • GATAN K3 BIOQUANTUM 6K X 4K [61]
  • GATAN K3 BIOCONTINUUM 6K X 4K [24]
  • GATAN K2 SUMMIT 4K X 4K [20]
  • GATAN K2 QUANTUM 4K X 4K [6]
  • FEI FALCON III 4K X 4K [5]
  • TFS FALCON 4I 4K X 4K [5]
  • DECTRIS SINGLA 1K X 1K [1]
  • GATAN K2 BASE 4K X 4K [1]
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Showing 1 - 10 of 285. Page 1 of 29
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EMD-43082
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3D View
Ecoli DnaB helicase and Phage Lambda loader P with ADP-Mg in a 6:5 stoichiometry ratio
Release date: March 4, 2026
Resolution: 2.84 Å
EM Method: Single-particle
Fitted PDBs: 8v9t
Q-score: 0.385

Shatarupa A, Brown D, Olinares PDB, Chase J, Isiorho E, Chait BT, Jeruzalmi D

Nucleic Acids Res (2025) 53 [ Pubmed: 41312769 DOI: doi:10.1093/nar/gkaf1139 ]

EMD-45682
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Transferrin Binding Protein A in complex with transferrin binding protein B and two molecules of transferrin
Release date: March 4, 2026
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 9clm
Q-score: 0.265

Dubey S, Noinaj N

To Be Published

EMD-45747
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Transferrin Binding Protein A in complex with transferrin binding protein B and transferrin iron bound in both lobes of Tf
Release date: March 4, 2026
Resolution: 3.71 Å
EM Method: Single-particle
Fitted PDBs: 9cmg
Q-score: 0.413

Dubey S, Noinaj N

To Be Published

EMD-46743
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3D View
Transferrin Binding Protein A in complex with transferrin binding protein B, transferrin and globular domain of TonB
Release date: March 4, 2026
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 9dc4
Q-score: 0.519

Dubey S, Noinaj N

To Be Published

EMD-46888
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3D View
human Argonaute-2 R315V/H316A - miR-122 in complex with a fully complementary target
Release date: March 4, 2026
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 9dhx
Q-score: 0.555

Sarkar S, Gebert LFR, MacRae IJ

To Be Published

EMD-48285
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3D View
Human PARP1 N-terminal domains bound to nicked DNA
Release date: March 4, 2026
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 9mi8
Q-score: 0.314

Sverzhinsky A, Xue H, Langelier MF, Muniz Correa MV, Del Mundo J, Classen S, Hammel M, Rothenberg E, Pascal JM

Nat Commun (2026) [ Pubmed: 41698892 DOI: doi:10.1038/s41467-026-69375-3 ]

EMD-49180
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3D View
RNA scaffold
Release date: March 4, 2026
Resolution: 3.51 Å
EM Method: Single-particle
Fitted PDBs: 9na1
Q-score: 0.354

Jones CP, Ferre-D'Amare AR

To Be Published

EMD-49181
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RNA scaffold
Release date: March 4, 2026
Resolution: 3.56 Å
EM Method: Single-particle
Fitted PDBs: 9na7
Q-score: 0.338

Jones CP, Ferre-D'Amare AR

To Be Published

EMD-49197
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3D View
RNA scaffold attached to tRNA
Release date: March 4, 2026
Resolution: 3.67 Å
EM Method: Single-particle
Fitted PDBs: 9nak
Q-score: 0.324

Jones CP, Ferre-D'Amare AR

To Be Published

EMD-49199
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3D View
RNA scaffold attached to Mango in the absence of ligand
Release date: March 4, 2026
Resolution: 2.87 Å
EM Method: Single-particle
Fitted PDBs: 9nam
Q-score: 0.411

Jones CP, Ferre-D'Amare AR

To Be Published

Sort by: Download
Showing 1 - 10 of 285. Page 1 of 29
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [285]

Current status

  • REL [285]

Sample type

  • Complex [241]
  • Protein [193]
  • Ligand [143]
  • RNA [32]
  • Cell [28]
  • DNA [23]
  • Virus [12]
  • Cellular component [5]

Organism

  • Homo sapiens [121]
  • Synthetic construct [49]
  • Mus musculus [26]
  • Escherichia coli [18]
  • Severe acute respiratory syndrome coronavirus [16]
  • Aequorea victoria [14]
  • Saccharomyces cerevisiae [13]
  • Oryctolagus cuniculus [13]
  • Sus scrofa [12]
  • Lama glama [12]
  • Mycobacterium phage bxb1 [11]
  • Escherichia coli [11]
  • Human herpesvirus 3 [9]
  • Mycolicibacterium smegmatis [9]
  • Roseiflexus castenholzii [8]
  • Escherichia coli [6]
  • Neisseria meningitidis [5]
  • (no species) [4]
  • Arabidopsis thaliana [4]
  • Neisseria meningitidis [4]
  • Phytophthora sojae [4]
  • Human immunodeficiency virus 1 [3]
  • Enterovirus c [3]
  • Synthetic rna [3]
  • Actinomyces procaprae [3]
  • Vicugna pacos [2]
  • Azotobacter vinelandii [2]
  • Saccharomyces cerevisiae [2]
  • Tetrahymena thermophila [2]
  • Crimean-congo hemorrhagic fever orthonairovirus [2]
  • Artemia franciscana [2]
  • (no species) [2]
  • Xenopus laevis [2]
  • Macaca mulatta [2]
  • Vaccinia virus [1]
  • Vaccinia virus [1]
  • Alphapapillomavirus 7 [1]
  • Dengue virus [1]
  • Bacillus thuringiensis [1]
  • Mycolicibacterium phlei [1]
  • Mycobacterium tuberculosis [1]
  • Human adenovirus sp. [1]
  • Spirochaetota bacterium [1]
  • Streptomyces phage phic31 [1]
  • Escherichia phage lambda [1]
  • (no species) [1]
  • Dna molecule [1]
  • Tenuivirus oryzabrevis [1]
  • Bryopsis corticulans [1]
  • Azotobacter vinelandii [1]
  • Oryza sativa [1]
  • Rotavirus a [1]
  • Acinetobacter baumannii [1]
  • Neisseria gonorrhoeae [1]
  • Citrobacter freundii [1]
  • Zymomonas mobilis [1]
  • Caenorhabditis elegans [1]
  • Drosophila melanogaster [1]
  • Mycobacterium tuberculosis [1]
  • Salmonella enterica [1]

EM Method

  • Single-particle [241]
  • Subtomogram averaging [22]
  • Tomography [18]
  • Helical reconstruction [4]

Resolution

  • < 2Å [3]
  • ≥ 2Å and < 3Å [78]
  • ≥ 3Å and < 4Å [126]
  • ≥ 4Å and < 5Å [27]
  • ≥ 5Å and < 6Å [1]
  • ≥ 6Å and < 8Å [8]
  • ≥ 8Å and < 12Å [9]
  • ≥ 12Å and < 16Å [4]
  • ≥ 16Å and < 20Å [3]
  • ≥ 20Å and < 30Å [6]
  • ≥ 30Å [2]

Release Date

  • 2026 [285]

Author by name

  • Majumdar S [20]
  • Zhao Y [17]
  • Ferre-D Amare Ar [16]
  • Jones CP [16]
  • Papasergi-scott MM [15]
  • Peroto MC [15]
  • Robertson MJ [15]
  • Skiniotis G [15]
  • Dlamini LS [14]
  • Endicott J [14]
  • Fairhead M [14]
  • Ferreira DSM [14]
  • Gittins O [14]
  • Martin M [14]
  • Noble M [14]
  • Pike ACW [14]
  • Rowland RJ [14]
  • Sauer DB [14]
  • Von Delft F [14]
  • Heinz DW [13]
  • Yamashita K [13]
  • Yuan B [13]
  • Boczkowska M [12]
  • Dominguez R [12]
  • Li R [12]
  • Li X [12]
  • Palmer NJ [12]
  • Rebowski G [12]
  • Wei Y [12]
  • Hiraizumi M [11]
  • Nishimasu H [11]
  • Baumeister W [10]
  • Beck F [10]
  • Enenkel C [10]
  • Ernst OP [10]
  • Qu L [10]
  • Schulman BA [10]
  • Soma T [10]
  • Tang X [10]
  • Tang XM [10]
  • Wilfling F [10]
  • Olver SL [9]
  • Zhang Y [9]
  • Blanchard SC [8]
  • Chiu W [8]
  • Gaisin AV [8]
  • Gaisin VA [8]
  • Guo J [8]
  • Hadjicharalambous C [8]
  • Hu M [8]
  • Kalathur R [8]
  • Koblizek M [8]
  • Li J [8]
  • Modak A [8]
  • Mujakic I [8]
  • Pilhofer M [8]
  • Varga BR [8]
  • Villena-alemany C [8]
  • Woldeyes RA [8]
  • Noinaj N [7]
  • Varga B [7]
  • Yuan Q [7]
  • Zhao L [7]
  • Andersen ES [6]
  • Cheng S [6]
  • Civit L [6]
  • Desdorf L [6]
  • Dominguze R [6]
  • Drabbels M [6]
  • Dubey S [6]
  • Geary C [6]
  • Gluck N [6]
  • Jana S [6]
  • Kjems J [6]
  • Kristoffersen EL [6]
  • Li Y [6]
  • Liu Y [6]
  • Lorenz UJ [6]
  • Stange A [6]
  • Valero J [6]
  • Vallina NS [6]
  • Zhou Y [6]
  • Zwergius NH [6]
  • Appourchaux K [5]
  • Bernhard SM [5]
  • Chanda B [5]
  • Che T [5]
  • Ciferri C [5]
  • Denn E [5]
  • Fay JF [5]
  • Gao HS [5]
  • Inoue A [5]
  • Koo CW [5]
  • Liu SX [5]
  • Liu YS [5]
  • Murata T [5]
  • Ramos-gonzalez N [5]
  • Reinl EL [5]
  • Roy Chowdhury S [5]
  • Shen EZ [5]

Journal

  • TO BE PUBLISHED [236]
  • CELL [11]
  • NATURE [9]
  • ISME J [8]
  • BIORXIV [7]
  • NAT COMMUN [6]
  • ACTA CRYSTALLOGR D STRUCT BIOL [3]
  • J MED CHEM [2]
  • NUCLEIC ACIDS RES [2]
  • CELL REP [1]
  • EMBO J [1]
  • J MOL CELL BIOL [1]
  • MBIO [1]
  • PROTEIN SCI [1]
  • SCIENCE [1]

Software

  • CRYOSPARC [145]
  • RELION [23]
  • WARP [11]
  • IMOD [10]
  • COOT [2]
  • GCTF [2]
  • AV3 [1]
  • CRYOSMART [1]
  • DYNAMO [1]
  • EMCLARITY [1]
  • PHENIX [1]

Microscope

  • TFS KRIOS [217]
  • TFS GLACIOS [18]
  • FEI TITAN KRIOS [14]
  • FEI TALOS ARCTICA [11]
  • TFS TITAN THEMIS [7]
  • FEI TECNAI F30 [5]
  • FEI TITAN [4]
  • JEOL CRYO ARM 300 [4]
  • JEOL CRYO ARM 200 [2]
  • FEI MORGAGNI [1]
  • FEI POLARA 300 [1]
  • TFS TALOS [1]

Electron Source

  • FIELD EMISSION GUN [285]

Film or detector model

  • GATAN K3 6K X 4K [89]
  • FEI FALCON IV 4K X 4K [73]
  • GATAN K3 BIOQUANTUM 6K X 4K [61]
  • GATAN K3 BIOCONTINUUM 6K X 4K [24]
  • GATAN K2 SUMMIT 4K X 4K [20]
  • GATAN K2 QUANTUM 4K X 4K [6]
  • FEI FALCON III 4K X 4K [5]
  • TFS FALCON 4I 4K X 4K [5]
  • DECTRIS SINGLA 1K X 1K [1]
  • GATAN K2 BASE 4K X 4K [1]