Literature for U72.001: Dop isopeptidase

2024
1. Kahne,S.C., Yoo,J.H., Chen,J., Nakedi,K., Iyer,L.M., Putzel,G., Samhadaneh,N.M., Pironti,A., Aravind,L., Ekiert,D.C., Bhabha,G., Rhee,K.Y. and Darwin,K.H.
   Identification of a depupylation regulator for an essential enzyme in Mycobacterium tuberculosis
   Proc Natl Acad Sci U S A121, e2407239121-e2407239121. PubMed  Europe PubMed DOI
2020
2. Prathiviraj,R. and Chellapandi,P.
   Deciphering molecular virulence mechanism of Mycobacterium tuberculosis Dop isopeptidase based on its sequence-structure-function linkage
   Protein J39, 33-45. PubMed  Europe PubMed DOI
2017
3. Bolten,M., Vahlensieck,C., Lipp,C., Leibundgut,M., Ban,N. and Weber-Ban,E.
   Depupylase Dop requires inorganic phosphate in the active site for catalysis
   J Biol Chem292, 4044-4053. PubMed  Europe PubMed DOI
2012
4. Burns,K.E., McAllister,F.E., Schwerdtfeger,C., Mintseris,J., Cerda-Maira,F., Noens,E.E., Wilmanns,M., Hubbard,S.R., Melandri,F., Ovaa,H., Gygi,S.P. and Darwin,K.H.
   Mycobacterium tuberculosis prokaryotic ubiquitin-like protein-deconjugating enzyme is an unusual aspartate amidase
   J Biol Chem287, 37522-37529. PubMed  Europe PubMed DOI
5. Ozcelik,D., Barandun,J., Schmitz,N., Sutter,M., Guth,E., Damberger,F.F., Allain,F.H., Ban,N. and Weber-Ban,E.
   Structures of Pup ligase PafA and depupylase Dop from the prokaryotic ubiquitin-like modification pathway
   Nat Commun3, 1014-1014. PubMed  Europe PubMed DOI
6. Yun,H.Y., Tamura,N. and Tamura,T.
   Rhodococcus prokaryotic ubiquitin-like protein (Pup) is degraded by deaminase of Pup (Dop)
   Biosci Biotechnol Biochem76, 1959-1966. PubMed  Europe PubMed DOI
2010
7. Burns,K.E., Cerda-Maira,F.A., Wang,T., Li,H., Bishai,W.R. and Darwin,K.H.
   "Depupylation" of prokaryotic ubiquitin-like protein from mycobacterial proteasome substrates
   Mol Cell39, 821-827. PubMed  Europe PubMed DOI
8. Cerda-Maira,F.A., Pearce,M.J., Fuortes,M., Bishai,W.R., Hubbard,S.R. and Darwin,K.H.
   Molecular analysis of the prokaryotic ubiquitin-like protein (Pup) conjugation pathway in Mycobacterium tuberculosis
   Mol Microbiol77, 1123-1135. PubMed  Europe PubMed DOI
9. Imkamp,F., Striebel,F., Sutter,M., Ozcelik,D., Zimmermann,N., Sander,P. and Weber-Ban,E.
   Dop functions as a depupylase in the prokaryotic ubiquitin-like modification pathway
   EMBO Rep11, 791-797. PubMed  Europe PubMed DOI
2009
10. Striebel,F., Imkamp,F., Sutter,M., Steiner,M., Mamedov,A. and Weber-Ban,E.
    Bacterial ubiquitin-like modifier Pup is deamidated and conjugated to substrates by distinct but homologous enzymes
    Nat Struct Mol Biol16, 647-651. PubMed  Europe PubMed DOI