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Literature for peptidase S14.002: peptidase Clp (type 2)

Summary Gene structure Alignment Tree Sequences Sequence features Distribution Structure Literature Substrates

(Topics flags: K Knockout. To select only the references relevant to a single topic, click the link above. See explanation.)

    2022
  1. Abdel-Ghany,S.E., LaManna,L.M., Harroun,H.T., Maliga,P. and Sloan,D.B.
    Rapid sequence evolution is associated with genetic incompatibilities in the plastid Clp complex
    Plant Mol Biol (2022) 108, 277-287. PubMed  Europe PubMed DOI
  2. Rei Liao,J.Y., Friso,G., Forsythe,E.S., Michel,E.J.S., Williams,A.M., Boguraev,S.S., Ponnala,L., Sloan,D.B. and van Wijk,K.J.
    Proteomics, phylogenetics, and coexpression analyses indicate novel interactions in the plastid CLP chaperone-protease system
    J Biol Chem (2022) 298, 101609-101609. PubMed  Europe PubMed DOI  PMC  EPMC
    3. 2013
  3. Kim,J., Olinares,P.D., Oh,S.H., Ghisaura,S., Poliakov,A., Ponnala,L. and van Wijk,K.J.
    Modified Clp protease complex in the ClpP3 null mutant and consequences for chloroplast development and function in Arabidopsis
    Plant Physiol (2013) 162, 157-179. PubMed  Europe PubMed DOI  K
    4. 2012
  4. Adam,Z., Clarke,A.K. and Maurizi,M.R.
    Clp endopeptidase homologs in plants and animals
    [ISSN:978-0-12-407742-3] (2012) 3, 3600-3605. DOI
  5. Clarke,A.K.
    The chloroplast ATP-dependent Clp protease in vascular plants - new dimensions and future challenges
    Physiol Plant (2012) 145, 235-244. PubMed  Europe PubMed DOI
    6. 2011
  6. Olinares,P.D., Kim,J. and van Wijk,K.J.
    The Clp protease system; a central component of the chloroplast protease network
    Biochim Biophys Acta (2011) 1807, 999-1011. PubMed  Europe PubMed DOI
  7. Olinares,P.D., Kim,J., Davis,J.I. and van Wijk,K.J.
    Subunit stoichiometry, evolution, and functional implications of an asymmetric plant plastid ClpP/R protease complex in Arabidopsis
    Plant Cell (2011) 23, 2348-2361. PubMed  Europe PubMed DOI
  8. Sjogren,L.L. and Clarke,A.K.
    Assembly of the chloroplast ATP-dependent Clp protease in Arabidopsis is regulated by the ClpT accessory proteins
    Plant Cell (2011) 23, 322-332. PubMed  Europe PubMed DOI
    9. 2009
  9. Kim,J., Rudella,A., Ramirez Rodriguez,V., Zybailov,B., Olinares,P.D. and van Wijk,K.J.
    Subunits of the plastid ClpPR protease complex have differential contributions to embryogenesis, plastid biogenesis, and plant development in Arabidopsis
    Plant Cell (2009) 21, 1669-1692. PubMed  Europe PubMed DOI  PMC  EPMC
    10. 2005
  10. Clarke,A.K., MacDonald,T.M. and Sjogren,L.L.E.
    The ATP-dependent Clp protease in chloroplasts of higher plants
    Physiol Plant (2005) 123, 406-412.
    11. 2004
  11. Peltier,J.B., Ripoll,D.R., Friso,G., Rudella,A., Cai,Y., Ytterberg,J., Giacomelli,L., Pillardy,J. and van Wijk,K.J.
    Clp protease complexes from photosynthetic and non-photosynthetic plastids and mitochondria of plants, their predicted three-dimensional structures, and functional implications
    J Biol Chem (2004) 279, 4768-4781. PubMed  Europe PubMed DOI
    12. 2003
  12. [YEAR:4-9-2003]Kuroda,H. and Maliga,P.
    The plastid clpP1 protease gene is essential for plant development
    Nature (4-9-2003) 425, 86-89. PubMed  Europe PubMed DOI
    13. 2002
  13. Zheng,B., Halperin,T., Hruskova-Heidingsfeldova,O., Adam,Z. and Clarke,A.K.
    Characterization of chloroplast Clp proteins in Arabidopsis: localization, tissue specificity and stress responses
    Physiol Plant (2002) 114, 92-101. PubMed  Europe PubMed
    14. 2001
  14. [YEAR:11-5-2001]Peltier,J.B., Ytterberg,J., Liberles,D.A., Roepstorff,P. and van Wijk,K.J.
    Identification of a 350-kDa ClpP protease complex with 10 different Clp isoforms in chloroplasts of Arabidopsis thaliana
    J Biol Chem (11-5-2001) 276, 16318-16327. PubMed  Europe PubMed DOI
    15. 1999
  15. Nakabayashi,K., Ito,M., Kiyosue,T., Shinozaki,K. and Watanabe,A.
    Identification of clp genes expressed in senescing Arabidopsis leaves
    Plant Cell Physiol (1999) 40, 504-514. PubMed  Europe PubMed
    16. 1996
  16. Benesova,M., Durcova,G., Kuzela,S., Kutejova,E. and Psenak,M.
    Spinach chloroplast ATP-dependent endopeptidase Ti-like protease
    Phytochemistry (1996) 41, 65-69. PubMed  Europe PubMed
    17. 1995
  17. Shanklin,J., DeWitt,N.D. and Flanagan,J.M.
    The stroma of higher plant plastids contain ClpP and ClpC, functional homologs of Escherichia coli ClpP and ClpA: An archetypal two-component ATP-dependent protease
    Plant Cell (1995) 7, 1713-1722. PubMed  Europe PubMed DOI  PMC  EPMC
    18. 1993
  18. Moore,T. and Keegstra,K.
    Characterization of a cDNA clone encoding a chloroplast-targeted Clp homologue
    Plant Mol Biol (1993) 21, 525-537. PubMed  Europe PubMed DOI
    19. 1990
  19. Gray,J.C., Hird,S.M. and Dyer,T.A.
    Nucleotide sequence of a wheat chloroplast gene encoding the proteolytic subunit of an ATP-dependent protease
    Plant Mol Biol (1990) 15, 947-950. PubMed  Europe PubMed DOI
  20. Offermann-Steinhard,K. and Herrmann,R.G.
    Nucleotide sequences of psbB and psbH, the plastid encoded genes for CP47 and the 10 kDa phosphoprotein of photosystem II in Oenothera hookeri and argillicola
    Nucleic Acids Res (1990) 18, 6452-6452. PubMed  Europe PubMed  PMC  EPMC

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