Literature for peptidase S09.070: acylaminoacyl peptidase (Aeropyrum-type)

(Topics flags: S Structure. To select only the references relevant to a single topic, click the link above. See explanation.)

2019

Petrenko,D.E., Mikhailova,A.G., Timofeev,V.I., Agapova Ycapital KA,C., Karlinsky,D.M., Komolov,A.S., Korzhenevskiy,D.A., Vlaskina,A.V., Rumsh,L.D. and Rakitina,T.V. Molecular dynamics complemented by site-directed mutagenesis reveals significant difference between the interdomain salt bridge networks stabilizing oligopeptidases B from bacteria and protozoa in their active conformations J Biomol Struct Dyn (2019) , 1-19. PubMed Europe PubMed DOI

2015

Menyhard,D.K., Orgovan,Z., Szeltner,Z., Szamosi,I. and Harmat,V. Catalytically distinct states captured in a crystal lattice: the substrate-bound and scavenger states of acylaminoacyl peptidase and their implications for functionality Acta Crystallogr D Biol Crystallogr (2015) 71, 461-472. PubMed Europe PubMed DOI S

2012

Papaleo,E., Renzetti,G. and Tiberti,M. Mechanisms of intramolecular communication in a hyperthermophilic acylaminoacyl peptidase: a molecular dynamics investigation PLoS ONE (2012) 7, e35686-e35686. PubMed Europe PubMed DOI PMC EPMC
Papaleo,E. and Renzetti,G. Coupled motions during dynamics reveal a tunnel toward the active site regulated by the N-terminal alpha-helix in an acylaminoacyl peptidase J Mol Graph Model (2012) 38, 226-234. PubMed Europe PubMed DOI
Polgar,L. Acylaminoacyl-peptidase (Aeropyrum) [ISSN:978-0-12-407742-3] (2012) 3, 3404-3407. DOI

2011

Harmat,V., Domokos,K., Menyhard,D.K., Pallo,A., Szeltner,Z., Szamosi,I., Beke-Somfai,T., Naray-Szabo,G. and Polgar,L. Structure and catalysis of acylaminoacyl peptidase: closed and open subunits of a dimer oligopeptidase J Biol Chem (2011) 286, 1987-1998. PubMed Europe PubMed DOI S
Liu,C., Yang,G., Wu,L., Tian,G., Zhang,Z. and Feng,Y. Switch of substrate specificity of hyperthermophilic acylaminoacyl peptidase by combination of protein and solvent engineering Protein Cell (2011) 2, 497-506. PubMed Europe PubMed DOI

2010

Palmieri,G., Langella,E., Gogliettino,M., Saviano,M., Pocsfalvi,G. and Rossi,M. A novel class of protease targets of phosphatidylethanolamine-binding proteins (PEBP): a study of the acylpeptide hydrolase and the PEBP inhibitor from the archaeon Sulfolobus solfataricus Mol Biosyst (2010) 6, 2498-2507. PubMed Europe PubMed DOI

2009

Usuki,H., Uesugi,Y., Iwabuchi,M. and Hatanaka,T. Activation of oligopeptidase B from Streptomyces griseus by thiol-reacting reagents is independent of the single reactive cysteine residue Biochim Biophys Acta (2009) 1794, 1673-1683. PubMed Europe PubMed DOI
Yang,G., Bai,A., Gao,L., Zhang,Z., Zheng,B. and Feng,Y. Glu88 in the non-catalytic domain of acylpeptide hydrolase plays dual roles: Charge neutralization for enzymatic activity and formation of salt bridge for thermodynamic stability Biochim Biophys Acta (2009) 1794, 94-102. PubMed Europe PubMed DOI

2008

Kiss,A.L., Pallo,A., Naray-Szabo,G., Harmat,V. and Polgar,L. Structural and kinetic contributions of the oxyanion binding site to the catalytic activity of acylaminoacyl peptidase J Struct Biol (2008) 162, 312-323. PubMed Europe PubMed DOI S
Zhang,Z., Zheng,B., Wang,Y., Chen,Y., Manco,G. and Feng,Y. The conserved N-terminal helix of acylpeptide hydrolase from archaeon Aeropyrum pernix K1 is important for its hyperthermophilic activity Biochim Biophys Acta (2008) 1784, 1176-1183. PubMed Europe PubMed DOI

2007

Kiss,A.L., Hornung,B., Radi,K., Gengeliczki,Z., Sztaray,B., Juhasz,T., Szeltner,Z., Harmat,V. and Polgar,L. The acylaminoacyl peptidase from Aeropyrum pernix K1 thought to be an exopeptidase displays endopeptidase activity J Mol Biol (2007) 368, 509-520. PubMed Europe PubMed DOI S

2006

[YEAR:2-5-2006]Wang,Q., Yang,G., Liu,Y. and Feng,Y. Discrimination of esterase and peptidase activities of acylaminoacyl peptidase from hyperthermophilic Aeropyrum pernix K1 by a single mutation J Biol Chem (2-5-2006) 281, 18618-18625. PubMed Europe PubMed DOI

2004

Bartlam,M., Wang,G., Yang,H., Gao,R., Zhao,X., Xie,G., Cao,S., Feng,Y. and Rao,Z. Crystal structure of an acylpeptide hydrolase/esterase from Aeropyrum pernix K1 Structure (2004) 12, 1481-1488. PubMed Europe PubMed DOI S

1991

Erlandsson,R., Boldog,F., Persson,B., Zabarovsky,E.R., Allikmets,R.L., Sumegi,J., Klein,G. and Jornvall,H. The gene from the short arm of chromosome 3, at D3F15S2, frequently deleted in renal cell carcinoma, encodes acylpeptide hydrolase Oncogene (1991) 6, 1293-1295. PubMed Europe PubMed