Literature for peptidase S09.070: acylaminoacyl peptidase (Aeropyrum-type)

(Topics flags: S Structure. To select only the references relevant to a single topic, click the link above. See explanation.)

2019
1. Petrenko,D.E., Mikhailova,A.G., Timofeev,V.I., Agapova Ycapital KA,C., Karlinsky,D.M., Komolov,A.S., Korzhenevskiy,D.A., Vlaskina,A.V., Rumsh,L.D. and Rakitina,T.V.
   Molecular dynamics complemented by site-directed mutagenesis reveals significant difference between the interdomain salt bridge networks stabilizing oligopeptidases B from bacteria and protozoa in their active conformations
   J Biomol Struct Dyn1-19. PubMed  Europe PubMed DOI
2015
2. Menyhard,D.K., Orgovan,Z., Szeltner,Z., Szamosi,I. and Harmat,V.
   Catalytically distinct states captured in a crystal lattice: the substrate-bound and scavenger states of acylaminoacyl peptidase and their implications for functionality
   Acta Crystallogr D Biol Crystallogr71, 461-472. PubMed  Europe PubMed DOI  S
2012
3. Papaleo,E. and Renzetti,G.
   Coupled motions during dynamics reveal a tunnel toward the active site regulated by the N-terminal alpha-helix in an acylaminoacyl peptidase
   J Mol Graph Model38, 226-234. PubMed  Europe PubMed DOI
4. Papaleo,E., Renzetti,G. and Tiberti,M.
   Mechanisms of intramolecular communication in a hyperthermophilic acylaminoacyl peptidase: a molecular dynamics investigation
   PLoS ONE7, e35686-e35686. PubMed  Europe PubMed DOI
5. Polgar,L.
   Acylaminoacyl-peptidase (Aeropyrum)
   [ISSN:978-0-12-407742-3]3, 3404-3407. DOI
2011
6. Harmat,V., Domokos,K., Menyhard,D.K., Pallo,A., Szeltner,Z., Szamosi,I., Beke-Somfai,T., Naray-Szabo,G. and Polgar,L.
   Structure and catalysis of acylaminoacyl peptidase: closed and open subunits of a dimer oligopeptidase
   J Biol Chem286, 1987-1998. PubMed  Europe PubMed DOI  S
7. Liu,C., Yang,G., Wu,L., Tian,G., Zhang,Z. and Feng,Y.
   Switch of substrate specificity of hyperthermophilic acylaminoacyl peptidase by combination of protein and solvent engineering
   Protein Cell2, 497-506. PubMed  Europe PubMed DOI
2010
8. Palmieri,G., Langella,E., Gogliettino,M., Saviano,M., Pocsfalvi,G. and Rossi,M.
   A novel class of protease targets of phosphatidylethanolamine-binding proteins (PEBP): a study of the acylpeptide hydrolase and the PEBP inhibitor from the archaeon Sulfolobus solfataricus
   Mol Biosyst6, 2498-2507. PubMed  Europe PubMed DOI
2009
9. Usuki,H., Uesugi,Y., Iwabuchi,M. and Hatanaka,T.
   Activation of oligopeptidase B from Streptomyces griseus by thiol-reacting reagents is independent of the single reactive cysteine residue
   Biochim Biophys Acta1794, 1673-1683. PubMed  Europe PubMed DOI
10. Yang,G., Bai,A., Gao,L., Zhang,Z., Zheng,B. and Feng,Y.
    Glu88 in the non-catalytic domain of acylpeptide hydrolase plays dual roles: Charge neutralization for enzymatic activity and formation of salt bridge for thermodynamic stability
    Biochim Biophys Acta1794, 94-102. PubMed  Europe PubMed DOI
2008
11. Kiss,A.L., Pallo,A., Naray-Szabo,G., Harmat,V. and Polgar,L.
    Structural and kinetic contributions of the oxyanion binding site to the catalytic activity of acylaminoacyl peptidase
    J Struct Biol162, 312-323. PubMed  Europe PubMed DOI  S
12. Zhang,Z., Zheng,B., Wang,Y., Chen,Y., Manco,G. and Feng,Y.
    The conserved N-terminal helix of acylpeptide hydrolase from archaeon Aeropyrum pernix K1 is important for its hyperthermophilic activity
    Biochim Biophys Acta1784, 1176-1183. PubMed  Europe PubMed DOI
2007
13. Kiss,A.L., Hornung,B., Radi,K., Gengeliczki,Z., Sztaray,B., Juhasz,T., Szeltner,Z., Harmat,V. and Polgar,L.
    The acylaminoacyl peptidase from Aeropyrum pernix K1 thought to be an exopeptidase displays endopeptidase activity
    J Mol Biol368, 509-520. PubMed  Europe PubMed DOI  S
2006
14. [YEAR:2-5-2006]Wang,Q., Yang,G., Liu,Y. and Feng,Y.
    Discrimination of esterase and peptidase activities of acylaminoacyl peptidase from hyperthermophilic Aeropyrum pernix K1 by a single mutation
    J Biol Chem281, 18618-18625. PubMed  Europe PubMed DOI
2004
15. Bartlam,M., Wang,G., Yang,H., Gao,R., Zhao,X., Xie,G., Cao,S., Feng,Y. and Rao,Z.
    Crystal structure of an acylpeptide hydrolase/esterase from Aeropyrum pernix K1
    Structure12, 1481-1488. PubMed  Europe PubMed DOI  S
1991
16. Erlandsson,R., Boldog,F., Persson,B., Zabarovsky,E.R., Allikmets,R.L., Sumegi,J., Klein,G. and Jornvall,H.
    The gene from the short arm of chromosome 3, at D3F15S2, frequently deleted in renal cell carcinoma, encodes acylpeptide hydrolase
    Oncogene6, 1293-1295. PubMed  Europe PubMed