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sample_name:"NADH dehydrogenase [ubiquinone] 1 subunit C2" AND author_name:"Wu M" AND xref_links:"interpro"

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EMD-9534

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Architecture of mammalian respirasome

Release date: April 12, 2017
Resolution: 5.4 Å
EM Method: Single-particle
Fitted PDBs: 5gpn
Q-score: 0.143

Gu J, Wu M, Guo R, Yan K, Lei J, Gao N, Yang M

Nature (2016) 537 pp. 639-643 [ Pubmed: 27654917 DOI: doi:10.1038/nature19359 ]

Sample:

Nadh dehydrogenase [ubiquinone] 1 subunit c1 (8 kDa, Protein from Pig)
Nadh-ubiquinone oxidoreductase chain 3 (12 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] 1 unknown subunit fragment (1 kDa, Protein from Pig)
Acyl carrier protein (17 kDa, Protein from Pig)
Nadh-ubiquinone oxidoreductase chain 5 (68 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 (20 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] 1 unknown subunit fragment (2 kDa, Protein from Pig)
Fe2/s2 (inorganic) cluster (175 Da, Ligand)
Nadh dehydrogenase [ubiquinone] iron-sulfur protein 3 (30 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 (11 kDa, Protein from Pig)
Nadh-ubiquinone oxidoreductase chain 4 (51 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] iron-sulfur protein 5 (12 kDa, Protein from Pig)
Nadh-ubiquinone oxidoreductase 75 kda subunit (79 kDa, Protein from Pig)
Cytochrome b-c1 complex subunit 1, mitochondrial (49 kDa, Protein from Bovine)
Cytochrome b-c1 complex subunit 6, mitochondrial (9 kDa, Protein from Bovine)
Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (16 kDa, Protein from Pig)
Mitochondrial nadh dehydrogenase fe-s protein 4 (19 kDa, Protein from Pig)
Cytochrome c oxidase subunit 6a2, mitochondrial (9 kDa, Protein from Bovine)
Cytochrome c oxidase subunit 1 (57 kDa, Protein from Bovine)
Cytochrome c oxidase subunit 7c, mitochondrial (5 kDa, Protein from Bovine)
Nadph dihydro-nicotinamide-adenine-dinucleotide phosphate (745 Da, Ligand)
Cytochrome b-c1 complex subunit 9 (7 kDa, Protein from Bovine)
Nadh dehydrogenase [ubiquinone] iron-sulfur protein 7 (23 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (50 kDa, Protein from Pig)
Cytochrome b (42 kDa, Protein from Bovine)
Nadh dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial (13 kDa, Protein from Pig)
Copper (ii) ion (63 Da, Ligand)
Nadh-ubiquinone oxidoreductase chain 2 (39 kDa, Protein from Pig)
Nadh-ubiquinone oxidoreductase chain 4l (10 kDa, Protein from Pig)
Flavin mononucleotide (456 Da, Ligand)
Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9 (42 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial (40 kDa, Protein from Pig)
Cytochrome c oxidase subunit 6c (8 kDa, Protein from Bovine)
Iron/sulfur cluster (351 Da, Ligand)
Cytochrome c oxidase subunit 2 (26 kDa, Protein from Bovine)
Zinc ion (65 Da, Ligand)
Nadh dehydrogenase [ubiquinone] 1 unknown subunit fragment (11 kDa, Protein from Pig)
Nadh-ubiquinone oxidoreductase chain 6 (19 kDa, Protein from Pig)
Cytochrome b-c1 complex subunit rieske, mitochondrial (7 kDa, Protein from Bovine)
Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 (8 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5 (21 kDa, Protein from Pig)
Cytochrome b-c1 complex subunit 7 (13 kDa, Protein from Bovine)
Cytochrome c oxidase subunit 5b, mitochondrial (10 kDa, Protein from Bovine)
Nadh dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial (27 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11 (14 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] iron-sulfur protein 2 (52 kDa, Protein from Pig)
Cytochrome c oxidase subunit 7a1, mitochondrial (6 kDa, Protein from Bovine)
Nadh dehydrogenase [ubiquinone] 1 unknown subunit fragment (1 kDa, Protein from Pig)
Heme c (618 Da, Ligand)
Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 (20 kDa, Protein from Pig)
Magnesium ion (24 Da, Ligand)
Heme-a (852 Da, Ligand)
Cytochrome c oxidase subunit 5a, mitochondrial (12 kDa, Protein from Bovine)
Cytochrome c oxidase subunit 3 (29 kDa, Protein from Bovine)
Cytochrome c oxidase subunit 8b, mitochondrial (4 kDa, Protein from Bovine)
Cytochrome c oxidase subunit 4 isoform 1, mitochondrial (17 kDa, Protein from Bovine)
Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 (14 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] 1 subunit c2 (14 kDa, Protein from Pig)
Nadh-ubiquinone oxidoreductase chain 1 (35 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] 1 unknown subunit fragment (6 kDa, Protein from Pig)
Protoporphyrin ix containing fe (616 Da, Ligand)
Cytochrome b-c1 complex subunit 10 (6 kDa, Protein from Bovine)
Nadh dehydrogenase [ubiquinone] 1 unknown subunit fragment (3 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 (13 kDa, Protein from Pig)
Cytochrome b-c1 complex subunit rieske, mitochondrial (29 kDa, Protein from Bovine)
Cytochrome b-c1 complex subunit 2, mitochondrial (46 kDa, Protein from Bovine)
Cytochrome c oxidase subunit 7b, mitochondrial (6 kDa, Protein from Bovine)
Cytochrome c oxidase subunit 6b1 (10 kDa, Protein from Bovine)
Cytochrome b-c1 complex subunit 8 (9 kDa, Protein from Bovine)
Cytochrome c1, heme protein, mitochondrial (27 kDa, Protein from Bovine)
Nadh dehydrogenase [ubiquinone] iron-sulfur protein 8 (23 kDa, Protein from Pig)
Respirasome (1 MDa, Complex from Sus scrofa)
Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3 (9 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 (21 kDa, Protein from Pig)

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EMD-9539

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Cryo-EM structure of mammalian respiratory supercomplex I1III2IV1

Release date: March 29, 2017
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 5gup
Q-score: 0.321

Wu M, Gu J, Guo R, Huang Y, Yang M

Cell (2016) 167 pp. 1598-1609.e10 [ DOI: doi:10.1016/j.cell.2016.11.012 Pubmed: 27912063 ]

Sample:

Cytochrome b-c1 complex subunit 8 (9 kDa, Protein from Pig)
Fe2/s2 (inorganic) cluster (175 Da, Ligand)
Nadh dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (23 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 (11 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6 (15 kDa, Protein from Pig)
S-[2-({n-[(2s)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] tetradecanethioate (568 Da, Ligand)
Cytochrome b-c1 complex subunit 10 (6 kDa, Protein from Pig)
Nadh-ubiquinone oxidoreductase chain 2 (39 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial (30 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial (40 kDa, Protein from Pig)
Acyl carrier protein, mitochondrial (17 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 (17 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (23 kDa, Protein from Pig)
Nadh-ubiquinone oxidoreductase chain 6 (19 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 (21 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (16 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11 (14 kDa, Protein from Pig)
Heme-a (852 Da, Ligand)
Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 (14 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] 1 subunit c2 (14 kDa, Protein from Pig)
Nadh-ubiquinone oxidoreductase chain 1 (35 kDa, Protein from Pig)
Cytochrome c oxidase subunit 7b, mitochondrial (6 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 (15 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 (13 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial (19 kDa, Protein from Pig)
Cytochrome c oxidase subunit 2 (26 kDa, Protein from Pig)
Cytochrome c oxidase subunit 6c (8 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 (12 kDa, Protein from Pig)
Nadh-ubiquinone oxidoreductase chain 3 (12 kDa, Protein from Pig)
Cardiolipin (1 kDa, Ligand)
Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 (20 kDa, Protein from Pig)
Cytochrome c oxidase subunit 8b, mitochondrial (4 kDa, Protein from Pig)
Nadh-ubiquinone oxidoreductase chain 4 (51 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial (21 kDa, Protein from Pig)
Copper (ii) ion (63 Da, Ligand)
Nadh-ubiquinone oxidoreductase chain 4l (10 kDa, Protein from Pig)
Cytochrome c oxidase subunit 6a, mitochondrial (9 kDa, Protein from Pig)
Cytochrome c oxidase subunit 1 (57 kDa, Protein from Pig)
Cytochrome b-c1 complex subunit 1, mitochondrial (52 kDa, Protein from Pig)
Cytochrome c oxidase subunit 5a, mitochondrial (12 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial (26 kDa, Protein from Pig)
(9r,11s)-9-({[(1s)-1-hydroxyhexadecyl]oxy}methyl)-2,2-dimethyl-5,7,10-trioxa-2lambda~5~-aza-6lambda~5~-phosphaoctacosane-6,6,11-triol (767 Da, Ligand)
Iron/sulfur cluster (351 Da, Ligand)
Respiratory supercomplex i1iii2iv1 (1 MDa, Complex from Sus scrofa)
Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial (11 kDa, Protein from Pig)
Cytochrome b-c1 complex subunit 7 (13 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] iron-sulfur protein 5 (12 kDa, Protein from Pig)
Nadph dihydro-nicotinamide-adenine-dinucleotide phosphate (745 Da, Ligand)
Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (16 kDa, Protein from Pig)
Cytochrome c oxidase subunit 3 (29 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] 1 subunit c1, mitochondrial (8 kDa, Protein from Pig)
Flavin mononucleotide (456 Da, Ligand)
Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1 (7 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 (8 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 (11 kDa, Protein from Pig)
Cytochrome c oxidase subunit 7a1, mitochondrial (6 kDa, Protein from Pig)
Nadh-ubiquinone oxidoreductase 75 kda subunit, mitochondrial (79 kDa, Protein from Pig)
Heme c (618 Da, Ligand)
Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 (20 kDa, Protein from Pig)
Magnesium ion (24 Da, Ligand)
Protoporphyrin ix containing fe (616 Da, Ligand)
Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial (21 kDa, Protein from Pig)
Cytochrome b-c1 complex subunit rieske, mitochondrial (29 kDa, Protein from Pig)
Cytochrome b (42 kDa, Protein from Pig)
Cytochrome b-c1 complex subunit 9 (7 kDa, Protein from Pig)
Cytochrome c oxidase subunit 5b, mitochondrial (10 kDa, Protein from Pig)
Cytochrome c oxidase subunit 7c, mitochondrial (5 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial (17 kDa, Protein from Pig)
Nadh-ubiquinone oxidoreductase chain 5 (68 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial (52 kDa, Protein from Pig)
Cytochrome b-c1 complex subunit rieske transit peptide, mitochondrial (7 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial (42 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (50 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial (13 kDa, Protein from Pig)
Cytochrome b-c1 complex subunit 2, mitochondrial (48 kDa, Protein from Pig)
Zinc ion (65 Da, Ligand)
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine (749 Da, Ligand)
Cytochrome c1, heme protein, mitochondrial (35 kDa, Protein from Pig)
Cytochrome b-c1 complex subunit 6, mitochondrial (10 kDa, Protein from Pig)
Cytochrome c oxidase subunit 4 isoform 1, mitochondrial (17 kDa, Protein from Pig)
Cytochrome c oxidase subunit 6b1 (10 kDa, Protein from Pig)
Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3 (9 kDa, Protein from Pig)

[Show more]

Sort by: Download

Showing 1 - 2 of 2. Page 1 of 1

Display: Statistics

Download

Select database:

EMDB [2]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

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